RNA–Protein interactions for RNA: ENST00000560983.1

HERC1-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-211ENST00000560983 C1orf159Q96HA4 380 aa4.65□□□□□ -1.67
HERC1-211ENST00000560983 C12orf42Q96LP6 360 aa4.65□□□□□ -1.67
HERC1-211ENST00000560983 SAMD11Q96NU1 681 aa4.65□□□□□ -1.67
HERC1-211ENST00000560983 TINF2Q9BSI4 451 aa4.65□□□□□ -1.67
HERC1-211ENST00000560983 TRPV6Q9H1D0 765 aa4.65□□□□□ -1.67
HERC1-211ENST00000560983 DNAJC18Q9H819 358 aa4.65□□□□□ -1.67
HERC1-211ENST00000560983 IGSF5Q9NSI5 407 aa4.65□□□□□ -1.67
HERC1-211ENST00000560983 FBXL7Q9UJT9 491 aa4.65□□□□□ -1.67
HERC1-211ENST00000560983 PALD1Q9ULE6 856 aa4.65□□□□□ -1.67
HERC1-211ENST00000560983 FAM50BQ9Y247 325 aa4.65□□□□□ -1.67
HERC1-211ENST00000560983 FAM186AA6NE01 2351 aa4.65□□□□□ -1.67
HERC1-211ENST00000560983 MROH5Q6ZUA9 1318 aa4.65□□□□□ -1.67
HERC1-211ENST00000560983 SETXQ7Z333 2677 aaKnown RBP4.65□□□□□ -1.67
HERC1-211ENST00000560983 PHIPQ8WWQ0 1821 aa4.65□□□□□ -1.67
HERC1-211ENST00000560983 ROBO3Q96MS0 1386 aa4.65□□□□□ -1.67
HERC1-211ENST00000560983 FRYLO94915 3013 aa4.64□□□□□ -1.67
HERC1-211ENST00000560983 PLXNA3P51805 1871 aa4.64□□□□□ -1.67
HERC1-211ENST00000560983 UNC79Q9P2D8 2635 aa4.64□□□□□ -1.67
HERC1-211ENST00000560983 AK9Q5TCS8 1911 aa4.64□□□□□ -1.67
HERC1-211ENST00000560983 ANKRD11Q6UB99 2663 aaPredicted RBP4.64□□□□□ -1.67
HERC1-211ENST00000560983 ZNF292O60281 2723 aa4.64□□□□□ -1.67
HERC1-211ENST00000560983 FASNP49327 2511 aaKnown RBP4.64□□□□□ -1.67
HERC1-211ENST00000560983 GPR75-ASB3A0A0A6YYF3 556 aa4.64□□□□□ -1.67
HERC1-211ENST00000560983 C9orf118A6NHY6 69 aa4.64□□□□□ -1.67
HERC1-211ENST00000560983 ADCY6O43306 1168 aa4.64□□□□□ -1.67
HERC1-211ENST00000560983 MBTPS2O43462 519 aa4.64□□□□□ -1.67
HERC1-211ENST00000560983 B4GALT4O60513 344 aa4.64□□□□□ -1.67
HERC1-211ENST00000560983 DUSP11O75319 330 aaKnown RBP4.64□□□□□ -1.67
HERC1-211ENST00000560983 TADA3O75528 432 aa4.64□□□□□ -1.67
HERC1-211ENST00000560983 SNAI1O95863 264 aaPredicted RBP4.64□□□□□ -1.67
HERC1-211ENST00000560983 PDGFBP01127 241 aaPredicted RBP4.64□□□□□ -1.67
HERC1-211ENST00000560983 PFKMP08237 780 aa4.64□□□□□ -1.67
HERC1-211ENST00000560983 TNFRSF1AP19438 455 aa4.64□□□□□ -1.67
HERC1-211ENST00000560983 NKX3-2P78367 333 aa4.64□□□□□ -1.67
HERC1-211ENST00000560983 SIGLEC14Q08ET2 396 aa4.64□□□□□ -1.67
HERC1-211ENST00000560983 CCDC30Q5VVM6 783 aa4.64□□□□□ -1.67
HERC1-211ENST00000560983 TMCO2Q7Z6W1 182 aaPredicted RBP4.64□□□□□ -1.67
HERC1-211ENST00000560983 TSPYL6Q8N831 410 aa4.64□□□□□ -1.67
HERC1-211ENST00000560983 SHCBP1Q8NEM2 672 aa4.64□□□□□ -1.67
HERC1-211ENST00000560983 LINS1Q8NG48 757 aa4.64□□□□□ -1.67
HERC1-211ENST00000560983 ZNF384Q8TF68 577 aa4.64□□□□□ -1.67
HERC1-211ENST00000560983 MBD6Q96DN6 1003 aa4.64□□□□□ -1.67
HERC1-211ENST00000560983 KAZALD1Q96I82 304 aa4.64□□□□□ -1.67
HERC1-211ENST00000560983 SPATC1LQ9H0A9 340 aa4.64□□□□□ -1.67
HERC1-211ENST00000560983 NGRNQ9NPE2 291 aaKnown RBP4.64□□□□□ -1.67
HERC1-211ENST00000560983 HSPBP1Q9NZL4 362 aa4.64□□□□□ -1.67
HERC1-211ENST00000560983 MTUS1Q9ULD2 1270 aa4.64□□□□□ -1.67
HERC1-211ENST00000560983 NPFFR2Q9Y5X5 522 aa4.64□□□□□ -1.67
HERC1-211ENST00000560983 FRMPD3Q5JV73 1810 aa4.64□□□□□ -1.67
HERC1-211ENST00000560983 KIF16BQ96L93 1317 aa4.64□□□□□ -1.67
HERC1-211ENST00000560983 SALL1Q9NSC2 1324 aa4.64□□□□□ -1.67
HERC1-211ENST00000560983 BRWD1Q9NSI6 2320 aa4.63□□□□□ -1.67
HERC1-211ENST00000560983 LOC285556D6RIA3 1793 aa4.63□□□□□ -1.67
HERC1-211ENST00000560983 A0A1B0GUL7 405 aa4.63□□□□□ -1.67
HERC1-211ENST00000560983 MROH6A6NGR9 719 aa4.63□□□□□ -1.67
HERC1-211ENST00000560983 LOC730098B7Z3J9 87 aa4.63□□□□□ -1.67
HERC1-211ENST00000560983 H7BY64 318 aa4.63□□□□□ -1.67
HERC1-211ENST00000560983 SUSD5O60279 629 aa4.63□□□□□ -1.67
HERC1-211ENST00000560983 ITGAVP06756 1048 aa4.63□□□□□ -1.67
HERC1-211ENST00000560983 PGK2P07205 417 aa4.63□□□□□ -1.67
HERC1-211ENST00000560983 C6orf222P0C671 652 aaPredicted RBP4.63□□□□□ -1.67
HERC1-211ENST00000560983 INSRRP14616 1297 aa4.63□□□□□ -1.67
HERC1-211ENST00000560983 VCAM1P19320 739 aa4.63□□□□□ -1.67
HERC1-211ENST00000560983 BCL6P41182 706 aa4.63□□□□□ -1.67
HERC1-211ENST00000560983 BTDP43251 543 aa4.63□□□□□ -1.67
HERC1-211ENST00000560983 GFRA1P56159 465 aa4.63□□□□□ -1.67
HERC1-211ENST00000560983 TCEAL5Q5H9L2 206 aa4.63□□□□□ -1.67
HERC1-211ENST00000560983 METTL24Q5JXM2 366 aa4.63□□□□□ -1.67
HERC1-211ENST00000560983 SLC35F1Q5T1Q4 408 aa4.63□□□□□ -1.67
HERC1-211ENST00000560983 MRM1Q6IN84 353 aaKnown RBP4.63□□□□□ -1.67
HERC1-211ENST00000560983 DENND5AQ6IQ26 1287 aa4.63□□□□□ -1.67
HERC1-211ENST00000560983 C6orf15Q6UXA7 325 aaPredicted RBP4.63□□□□□ -1.67
HERC1-211ENST00000560983 CD300LDQ6UXZ3 194 aa4.63□□□□□ -1.67
HERC1-211ENST00000560983 DEFB128Q7Z7B8 93 aa4.63□□□□□ -1.67
HERC1-211ENST00000560983 ZC3H18Q86VM9 953 aaKnown RBP4.63□□□□□ -1.67
HERC1-211ENST00000560983 KIAA2013Q8IYS2 634 aa4.63□□□□□ -1.67
HERC1-211ENST00000560983 LGI4Q8N135 537 aa4.63□□□□□ -1.67
HERC1-211ENST00000560983 TMEM105Q8N8V8 129 aa4.63□□□□□ -1.67
HERC1-211ENST00000560983 PCSK9Q8NBP7 692 aaKnown RBP4.63□□□□□ -1.67
HERC1-211ENST00000560983 TXNDC5Q8NBS9 432 aaKnown RBP4.63□□□□□ -1.67
HERC1-211ENST00000560983 RCBTB1Q8NDN9 531 aa4.63□□□□□ -1.67
HERC1-211ENST00000560983 DIO2Q92813 273 aa4.63□□□□□ -1.67
HERC1-211ENST00000560983 ANAPC16Q96DE5 110 aa4.63□□□□□ -1.67
HERC1-211ENST00000560983 MRPL38Q96DV4 380 aaKnown RBP4.63□□□□□ -1.67
HERC1-211ENST00000560983 CCDC140Q96MF4 163 aa4.63□□□□□ -1.67
HERC1-211ENST00000560983 RIPOR3Q96MK2 946 aa4.63□□□□□ -1.67
HERC1-211ENST00000560983 TGS1Q96RS0 853 aaKnown RBP4.63□□□□□ -1.67
HERC1-211ENST00000560983 UPF3AQ9H1J1 476 aaKnown RBP4.63□□□□□ -1.67
HERC1-211ENST00000560983 CDIP1Q9H305 208 aa4.63□□□□□ -1.67
HERC1-211ENST00000560983 MROH8Q9H579 483 aa4.63□□□□□ -1.67
HERC1-211ENST00000560983 MYH16Q9H6N6 1097 aa4.63□□□□□ -1.67
HERC1-211ENST00000560983 SMPD4Q9NXE4 827 aa4.63□□□□□ -1.67
HERC1-211ENST00000560983 SLC5A4Q9NY91 659 aa4.63□□□□□ -1.67
HERC1-211ENST00000560983 PI4KBQ9UBF8 816 aa4.63□□□□□ -1.67
HERC1-211ENST00000560983 HERC5Q9UII4 1024 aaKnown RBP4.63□□□□□ -1.67
HERC1-211ENST00000560983 FAM184BQ9ULE4 1060 aa4.63□□□□□ -1.67
HERC1-211ENST00000560983 ZBTB21Q9ULJ3 1066 aa4.63□□□□□ -1.67
HERC1-211ENST00000560983 INVSQ9Y283 1065 aa4.63□□□□□ -1.67
HERC1-211ENST00000560983 INPP5FQ9Y2H2 1132 aa4.63□□□□□ -1.67
HERC1-211ENST00000560983 WDFY3Q8IZQ1 3526 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms