RNA–Protein interactions for RNA: ENST00000560383.5

SNRPA1-210, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-210ENST00000560383 ZC2HC1CQ53FD0 456 aaPredicted RBP16.56■□□□□ 0.24
SNRPA1-210ENST00000560383 RESP18Q5W5W9 173 aa16.56■□□□□ 0.24
SNRPA1-210ENST00000560383 CNNM4Q6P4Q7 775 aa16.56■□□□□ 0.24
SNRPA1-210ENST00000560383 SLC39A4Q6P5W5 647 aa16.56■□□□□ 0.24
SNRPA1-210ENST00000560383 DCLRE1AQ6PJP8 1040 aa16.56■□□□□ 0.24
SNRPA1-210ENST00000560383 CD300LGQ6UXG3 332 aa16.56■□□□□ 0.24
SNRPA1-210ENST00000560383 IQUBQ8NA54 791 aa16.56■□□□□ 0.24
SNRPA1-210ENST00000560383 PRSS33Q8NF86 280 aa16.56■□□□□ 0.24
SNRPA1-210ENST00000560383 BICD1Q96G01 975 aa16.56■□□□□ 0.24
SNRPA1-210ENST00000560383 LRRC27Q9C0I9 530 aa16.56■□□□□ 0.24
SNRPA1-210ENST00000560383 PLEKHA4Q9H4M7 779 aa16.56■□□□□ 0.24
SNRPA1-210ENST00000560383 PLEKHA5Q9HAU0 1116 aa16.56■□□□□ 0.24
SNRPA1-210ENST00000560383 SLC38A7Q9NVC3 462 aa16.56■□□□□ 0.24
SNRPA1-210ENST00000560383 STYXL1Q9Y6J8 313 aa16.56■□□□□ 0.24
SNRPA1-210ENST00000560383 TTC26A0AVF1 554 aa16.55■□□□□ 0.24
SNRPA1-210ENST00000560383 OGTO15294 1046 aa16.55■□□□□ 0.24
SNRPA1-210ENST00000560383 ADRB2P07550 413 aa16.55■□□□□ 0.24
SNRPA1-210ENST00000560383 HARSP12081 509 aaKnown RBP16.55■□□□□ 0.24
SNRPA1-210ENST00000560383 ME1P48163 572 aa16.55■□□□□ 0.24
SNRPA1-210ENST00000560383 CLCNKBP51801 687 aa16.55■□□□□ 0.24
SNRPA1-210ENST00000560383 ELAVL2Q12926 359 aaKnown RBP16.55■□□□□ 0.24
SNRPA1-210ENST00000560383 BECN1Q14457 450 aa16.55■□□□□ 0.24
SNRPA1-210ENST00000560383 DDX27Q96GQ7 796 aaKnown RBP16.55■□□□□ 0.24
SNRPA1-210ENST00000560383 ZDHHC7Q9NXF8 308 aa16.55■□□□□ 0.24
SNRPA1-210ENST00000560383 MYH11P35749 1972 aa16.55■□□□□ 0.24
SNRPA1-210ENST00000560383 IGFBP6P24592 240 aaPredicted RBP16.54■□□□□ 0.24
SNRPA1-210ENST00000560383 RPL9P32969 192 aaKnown RBP16.54■□□□□ 0.24
SNRPA1-210ENST00000560383 SEZ6Q53EL9 994 aa16.54■□□□□ 0.24
SNRPA1-210ENST00000560383 RTP2Q5QGT7 225 aa16.54■□□□□ 0.24
SNRPA1-210ENST00000560383 IER5LQ5T953 404 aa16.54■□□□□ 0.24
SNRPA1-210ENST00000560383 FEZF2Q8TBJ5 459 aa16.54■□□□□ 0.24
SNRPA1-210ENST00000560383 STAMQ92783 540 aa16.54■□□□□ 0.24
SNRPA1-210ENST00000560383 B3GALT6Q96L58 329 aa16.54■□□□□ 0.24
SNRPA1-210ENST00000560383 TSPAN18Q96SJ8 248 aa16.54■□□□□ 0.24
SNRPA1-210ENST00000560383 TRIM9Q9C026 710 aa16.54■□□□□ 0.24
SNRPA1-210ENST00000560383 MRPL44Q9H9J2 332 aaKnown RBP16.54■□□□□ 0.24
SNRPA1-210ENST00000560383 MAGEF1Q9HAY2 307 aa16.54■□□□□ 0.24
SNRPA1-210ENST00000560383 WDR6Q9NNW5 1121 aaKnown RBP16.54■□□□□ 0.24
SNRPA1-210ENST00000560383 LIMD1Q9UGP4 676 aa16.54■□□□□ 0.24
SNRPA1-210ENST00000560383 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.54■□□□□ 0.24
SNRPA1-210ENST00000560383 MYO15AQ9UKN7 3530 aa16.53■□□□□ 0.24
SNRPA1-210ENST00000560383 VWA8A3KMH1 1905 aa16.53■□□□□ 0.24
SNRPA1-210ENST00000560383 CLUHO75153 1309 aa16.53■□□□□ 0.24
SNRPA1-210ENST00000560383 CCDC195A0A1B0GUA6 201 aa16.53■□□□□ 0.24
SNRPA1-210ENST00000560383 ANKRD63C9JTQ0 380 aa16.53■□□□□ 0.24
SNRPA1-210ENST00000560383 B3GAT3O94766 335 aa16.53■□□□□ 0.24
SNRPA1-210ENST00000560383 ASGR2P07307 311 aa16.53■□□□□ 0.24
SNRPA1-210ENST00000560383 CXCL8P10145 99 aa16.53■□□□□ 0.24
SNRPA1-210ENST00000560383 IDEP14735 1019 aa16.53■□□□□ 0.24
SNRPA1-210ENST00000560383 AVPR2P30518 371 aa16.53■□□□□ 0.24
SNRPA1-210ENST00000560383 MATR3P43243 847 aaKnown RBP eCLIP16.53■□□□□ 0.241e-7■■□□□ 11.4
SNRPA1-210ENST00000560383 MRE11P49959 708 aa16.53■□□□□ 0.24
SNRPA1-210ENST00000560383 VCPP55072 806 aaKnown RBP16.53■□□□□ 0.24
SNRPA1-210ENST00000560383 AMPD3Q01432 767 aa16.53■□□□□ 0.24
SNRPA1-210ENST00000560383 POU5F1Q01860 360 aaKnown RBP16.53■□□□□ 0.24
SNRPA1-210ENST00000560383 ALCAMQ13740 583 aa16.53■□□□□ 0.24
SNRPA1-210ENST00000560383 ZBTB6Q15916 424 aa16.53■□□□□ 0.24
SNRPA1-210ENST00000560383 SLFN12LQ6IEE8 588 aa16.53■□□□□ 0.24
SNRPA1-210ENST00000560383 PDXDC1Q6P996 788 aa16.53■□□□□ 0.24
SNRPA1-210ENST00000560383 ALYREFQ86V81 257 aaKnown RBP16.53■□□□□ 0.24
SNRPA1-210ENST00000560383 C3orf58Q8NDZ4 430 aa16.53■□□□□ 0.24
SNRPA1-210ENST00000560383 HASPINQ8TF76 798 aa16.53■□□□□ 0.24
SNRPA1-210ENST00000560383 LEO1Q8WVC0 666 aaPredicted RBP16.53■□□□□ 0.24
SNRPA1-210ENST00000560383 RIN2Q8WYP3 895 aaPredicted RBP16.53■□□□□ 0.24
SNRPA1-210ENST00000560383 PIK3R5Q8WYR1 880 aa16.53■□□□□ 0.24
SNRPA1-210ENST00000560383 DHX58Q96C10 678 aa16.53■□□□□ 0.24
SNRPA1-210ENST00000560383 TTPALQ9BTX7 342 aa16.53■□□□□ 0.24
SNRPA1-210ENST00000560383 MSTO1Q9BUK6 570 aa16.53■□□□□ 0.24
SNRPA1-210ENST00000560383 IRF2BPLQ9H1B7 796 aa16.53■□□□□ 0.24
SNRPA1-210ENST00000560383 GOLGA2P5Q9HBQ8 144 aa16.53■□□□□ 0.24
SNRPA1-210ENST00000560383 PANK4Q9NVE7 773 aa16.53■□□□□ 0.24
SNRPA1-210ENST00000560383 FAM13BQ9NYF5 915 aa16.53■□□□□ 0.24
SNRPA1-210ENST00000560383 CPSF3Q9UKF6 684 aaKnown RBP16.53■□□□□ 0.24
SNRPA1-210ENST00000560383 PCDHB13Q9Y5F0 798 aa16.53■□□□□ 0.24
SNRPA1-210ENST00000560383 DOCK8Q8NF50 2099 aa16.52■□□□□ 0.24
SNRPA1-210ENST00000560383 TRIP11Q15643 1979 aa16.52■□□□□ 0.24
SNRPA1-210ENST00000560383 POLR2DO15514 142 aaKnown RBP16.52■□□□□ 0.24
SNRPA1-210ENST00000560383 TGM5O43548 720 aa16.52■□□□□ 0.24
SNRPA1-210ENST00000560383 FGFR3P22607 806 aa16.52■□□□□ 0.24
SNRPA1-210ENST00000560383 ADSSP30520 456 aa16.52■□□□□ 0.24
SNRPA1-210ENST00000560383 TNFSF9P41273 254 aa16.52■□□□□ 0.24
SNRPA1-210ENST00000560383 CASP5P51878 434 aa16.52■□□□□ 0.24
SNRPA1-210ENST00000560383 KRT85P78386 507 aa16.52■□□□□ 0.24
SNRPA1-210ENST00000560383 KCNA1Q09470 495 aa16.52■□□□□ 0.24
SNRPA1-210ENST00000560383 TCF15Q12870 199 aa16.52■□□□□ 0.24
SNRPA1-210ENST00000560383 ENOX2Q16206 610 aaKnown RBP16.52■□□□□ 0.24
SNRPA1-210ENST00000560383 ZBTB41Q5SVQ8 909 aa16.52■□□□□ 0.24
SNRPA1-210ENST00000560383 L1TD1Q5T7N2 865 aaKnown RBP16.52■□□□□ 0.24
SNRPA1-210ENST00000560383 FAM171A1Q5VUB5 890 aa16.52■□□□□ 0.24
SNRPA1-210ENST00000560383 ADALQ6DHV7 355 aa16.52■□□□□ 0.24
SNRPA1-210ENST00000560383 LILRA6Q6PI73 481 aa16.52■□□□□ 0.24
SNRPA1-210ENST00000560383 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.52■□□□□ 0.24
SNRPA1-210ENST00000560383 CD302Q8IX05 232 aa16.52■□□□□ 0.24
SNRPA1-210ENST00000560383 CCDC65Q8IXS2 484 aa16.52■□□□□ 0.24
SNRPA1-210ENST00000560383 LNX1Q8TBB1 728 aaPredicted RBP16.52■□□□□ 0.24
SNRPA1-210ENST00000560383 C18orf25Q96B23 403 aaPredicted RBP16.52■□□□□ 0.24
SNRPA1-210ENST00000560383 ZNF707Q96C28 371 aaPredicted RBP16.52■□□□□ 0.24
SNRPA1-210ENST00000560383 C7orf25Q9BPX7 421 aa16.52■□□□□ 0.24
SNRPA1-210ENST00000560383 PYM1Q9BRP8 204 aaKnown RBP16.52■□□□□ 0.24
SNRPA1-210ENST00000560383 IGSF9Q9P2J2 1179 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms