RNA–Protein interactions for RNA: ENST00000559151.1

CASC4-208, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 883 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-208ENST00000559151 PMS2P1A4D2B8 440 aa13.56□□□□□ -0.24
CASC4-208ENST00000559151 NCK2O43639 380 aa13.56□□□□□ -0.24
CASC4-208ENST00000559151 NUAK1O60285 661 aa13.56□□□□□ -0.24
CASC4-208ENST00000559151 PHKA1P46020 1223 aa13.56□□□□□ -0.24
CASC4-208ENST00000559151 TRAPPC10P48553 1259 aa13.56□□□□□ -0.24
CASC4-208ENST00000559151 KIAA2012Q0VF49 1180 aa13.56□□□□□ -0.24
CASC4-208ENST00000559151 ANKS6Q68DC2 871 aa13.56□□□□□ -0.24
CASC4-208ENST00000559151 LIX1LQ8IVB5 337 aa13.56□□□□□ -0.24
CASC4-208ENST00000559151 ARL8AQ96BM9 186 aa13.56□□□□□ -0.24
CASC4-208ENST00000559151 TCF25Q9BQ70 676 aa13.56□□□□□ -0.24
CASC4-208ENST00000559151 EPC1Q9H2F5 836 aa13.56□□□□□ -0.24
CASC4-208ENST00000559151 GNL3LQ9NVN8 582 aaKnown RBP13.56□□□□□ -0.24
CASC4-208ENST00000559151 STK32BQ9NY57 414 aa13.56□□□□□ -0.24
CASC4-208ENST00000559151 MTHFD1P11586 935 aaKnown RBP13.55□□□□□ -0.24
CASC4-208ENST00000559151 EN2P19622 333 aaPredicted RBP13.55□□□□□ -0.24
CASC4-208ENST00000559151 RAP1GAPP47736 663 aa13.55□□□□□ -0.24
CASC4-208ENST00000559151 ERAP2Q6P179 960 aa13.55□□□□□ -0.24
CASC4-208ENST00000559151 GPR135Q8IZ08 494 aa13.55□□□□□ -0.24
CASC4-208ENST00000559151 IL17RDQ8NFM7 739 aa13.55□□□□□ -0.24
CASC4-208ENST00000559151 NEIL1Q96FI4 390 aaPredicted RBP13.55□□□□□ -0.24
CASC4-208ENST00000559151 TRIM54Q9BYV2 358 aa13.55□□□□□ -0.24
CASC4-208ENST00000559151 POM121BA6NF01 834 aa13.54□□□□□ -0.24
CASC4-208ENST00000559151 NOBOXO60393 691 aa13.54□□□□□ -0.24
CASC4-208ENST00000559151 SLC6A4P31645 630 aa13.54□□□□□ -0.24
CASC4-208ENST00000559151 STT3AP46977 705 aa13.54□□□□□ -0.24
CASC4-208ENST00000559151 EMC10Q5UCC4 262 aa13.54□□□□□ -0.24
CASC4-208ENST00000559151 TCERG1LQ5VWI1 586 aa13.54□□□□□ -0.24
CASC4-208ENST00000559151 ZNF529Q6P280 563 aa13.54□□□□□ -0.24
CASC4-208ENST00000559151 UBE3BQ7Z3V4 1068 aa13.54□□□□□ -0.24
CASC4-208ENST00000559151 FRMD5Q7Z6J6 570 aa13.54□□□□□ -0.24
CASC4-208ENST00000559151 NDC1Q9BTX1 674 aa13.54□□□□□ -0.24
CASC4-208ENST00000559151 PACSIN1Q9BY11 444 aa13.54□□□□□ -0.24
CASC4-208ENST00000559151 OAZ3Q9UMX2 235 aa13.54□□□□□ -0.24
CASC4-208ENST00000559151 RNF114Q9Y508 228 aa13.54□□□□□ -0.24
CASC4-208ENST00000559151 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.54□□□□□ -0.24
CASC4-208ENST00000559151 F8W8V4 182 aa13.53□□□□□ -0.24
CASC4-208ENST00000559151 FOXN3O00409 490 aaPredicted RBP13.53□□□□□ -0.24
CASC4-208ENST00000559151 HOXA3O43365 443 aaPredicted RBP13.53□□□□□ -0.24
CASC4-208ENST00000559151 GNAI3P08754 354 aa13.53□□□□□ -0.24
CASC4-208ENST00000559151 RAP2BP61225 183 aa13.53□□□□□ -0.24
CASC4-208ENST00000559151 GNAI1P63096 354 aa13.53□□□□□ -0.24
CASC4-208ENST00000559151 XYLT1Q86Y38 959 aa13.53□□□□□ -0.24
CASC4-208ENST00000559151 KBTBD7Q8WVZ9 684 aa13.53□□□□□ -0.24
CASC4-208ENST00000559151 KIAA1191Q96A73 305 aa13.53□□□□□ -0.24
CASC4-208ENST00000559151 ADAM7Q9H2U9 754 aa13.53□□□□□ -0.24
CASC4-208ENST00000559151 PPCSQ9HAB8 311 aa13.53□□□□□ -0.24
CASC4-208ENST00000559151 PNPLA8Q9NP80 782 aa13.53□□□□□ -0.24
CASC4-208ENST00000559151 GPRC5BQ9NZH0 403 aa13.53□□□□□ -0.24
CASC4-208ENST00000559151 ZDHHC8Q9ULC8 765 aa13.53□□□□□ -0.24
CASC4-208ENST00000559151 PRSS29PA6NIE9 313 aa13.52□□□□□ -0.25
CASC4-208ENST00000559151 F5H423 210 aaPredicted RBP13.52□□□□□ -0.25
CASC4-208ENST00000559151 TCEA3O75764 348 aa13.52□□□□□ -0.25
CASC4-208ENST00000559151 FOSP01100 380 aaPredicted RBP13.52□□□□□ -0.25
CASC4-208ENST00000559151 SNRPA1P09661 255 aaKnown RBP13.52□□□□□ -0.25
CASC4-208ENST00000559151 TSHRP16473 764 aa13.52□□□□□ -0.25
CASC4-208ENST00000559151 KCNJ5P48544 419 aa13.52□□□□□ -0.25
CASC4-208ENST00000559151 ARFIP2P53365 341 aa13.52□□□□□ -0.25
CASC4-208ENST00000559151 FAM209BQ5JX69 171 aa13.52□□□□□ -0.25
CASC4-208ENST00000559151 BORAQ6PGQ7 559 aa13.52□□□□□ -0.25
CASC4-208ENST00000559151 SUCLG2Q96I99 432 aa13.52□□□□□ -0.25
CASC4-208ENST00000559151 UNKQ9C0B0 810 aaKnown RBP13.52□□□□□ -0.25
CASC4-208ENST00000559151 CERS4Q9HA82 394 aa13.52□□□□□ -0.25
CASC4-208ENST00000559151 STARD7Q9NQZ5 370 aa13.52□□□□□ -0.25
CASC4-208ENST00000559151 SACM1LQ9NTJ5 587 aa13.52□□□□□ -0.25
CASC4-208ENST00000559151 PNPLA7Q6ZV29 1317 aa13.51□□□□□ -0.25
CASC4-208ENST00000559151 CDC14BO60729 498 aa13.51□□□□□ -0.25
CASC4-208ENST00000559151 KCNC1P48547 511 aa13.51□□□□□ -0.25
CASC4-208ENST00000559151 NOMO3P69849 1222 aa13.51□□□□□ -0.25
CASC4-208ENST00000559151 DAG1Q14118 895 aa13.51□□□□□ -0.25
CASC4-208ENST00000559151 C3orf38Q5JPI3 329 aa13.51□□□□□ -0.25
CASC4-208ENST00000559151 NT5DC1Q5TFE4 455 aa13.51□□□□□ -0.25
CASC4-208ENST00000559151 POF1BQ8WVV4 589 aa13.51□□□□□ -0.25
CASC4-208ENST00000559151 PJA2O43164 708 aa13.5□□□□□ -0.25
CASC4-208ENST00000559151 CREB3O43889 395 aa13.5□□□□□ -0.25
CASC4-208ENST00000559151 SLC43A1O75387 559 aa13.5□□□□□ -0.25
CASC4-208ENST00000559151 CR2P20023 1033 aa13.5□□□□□ -0.25
CASC4-208ENST00000559151 CLRN1P58418 232 aa13.5□□□□□ -0.25
CASC4-208ENST00000559151 BTKQ06187 659 aa13.5□□□□□ -0.25
CASC4-208ENST00000559151 PCSK9Q8NBP7 692 aaKnown RBP13.5□□□□□ -0.25
CASC4-208ENST00000559151 LRRC37BQ96QE4 947 aa13.5□□□□□ -0.25
CASC4-208ENST00000559151 VPS11Q9H270 941 aa13.5□□□□□ -0.25
CASC4-208ENST00000559151 BRD9Q9H8M2 597 aa13.5□□□□□ -0.25
CASC4-208ENST00000559151 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.5□□□□□ -0.25
CASC4-208ENST00000559151 TRMT13Q9NUP7 481 aaKnown RBP13.5□□□□□ -0.25
CASC4-208ENST00000559151 SLC45A2Q9UMX9 530 aa13.5□□□□□ -0.25
CASC4-208ENST00000559151 MED16Q9Y2X0 877 aa13.5□□□□□ -0.25
CASC4-208ENST00000559151 B5MCH6 92 aa13.49□□□□□ -0.25
CASC4-208ENST00000559151 IL18RAPO95256 599 aa13.49□□□□□ -0.25
CASC4-208ENST00000559151 GJB1P08034 283 aa13.49□□□□□ -0.25
CASC4-208ENST00000559151 ABCB4P21439 1286 aa13.49□□□□□ -0.25
CASC4-208ENST00000559151 DUSP8Q13202 625 aa13.49□□□□□ -0.25
CASC4-208ENST00000559151 KIF22Q14807 665 aa13.49□□□□□ -0.25
CASC4-208ENST00000559151 IZUMO3Q5VZ72 239 aa13.49□□□□□ -0.25
CASC4-208ENST00000559151 FAM111BQ6SJ93 734 aa13.49□□□□□ -0.25
CASC4-208ENST00000559151 ARHGEF18Q6ZSZ5 1173 aa13.49□□□□□ -0.25
CASC4-208ENST00000559151 CCDC33Q8N5R6 958 aa13.49□□□□□ -0.25
CASC4-208ENST00000559151 POU5F2Q8N7G0 328 aa13.49□□□□□ -0.25
CASC4-208ENST00000559151 OR6B3Q8NGW1 331 aa13.49□□□□□ -0.25
CASC4-208ENST00000559151 MAML1Q92585 1016 aa13.49□□□□□ -0.25
CASC4-208ENST00000559151 ZNF512Q96ME7 567 aaPredicted RBP13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms