RNA–Protein interactions for RNA: ENST00000558919.1

VPS13C-207, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

TSL 5

Gene VPS13C, Length 566 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-207ENST00000558919 INHBCP55103 352 aa4.87□□□□□ -1.63
VPS13C-207ENST00000558919 MXRA7P84157 204 aa4.87□□□□□ -1.63
VPS13C-207ENST00000558919 PURAQ00577 322 aaKnown RBP4.87□□□□□ -1.63
VPS13C-207ENST00000558919 PABPC1LQ4VXU2 614 aaKnown RBP4.87□□□□□ -1.63
VPS13C-207ENST00000558919 Q6ZPA2 131 aa4.87□□□□□ -1.63
VPS13C-207ENST00000558919 TTC7BQ86TV6 843 aa4.87□□□□□ -1.63
VPS13C-207ENST00000558919 LDLRAD3Q86YD5 345 aa4.87□□□□□ -1.63
VPS13C-207ENST00000558919 MAPKAPK5Q8IW41 473 aa4.87□□□□□ -1.63
VPS13C-207ENST00000558919 CPA6Q8N4T0 437 aa4.87□□□□□ -1.63
VPS13C-207ENST00000558919 DCBLD1Q8N8Z6 715 aa4.87□□□□□ -1.63
VPS13C-207ENST00000558919 NSUN6Q8TEA1 469 aaKnown RBP4.87□□□□□ -1.63
VPS13C-207ENST00000558919 NUP133Q8WUM0 1156 aa4.87□□□□□ -1.63
VPS13C-207ENST00000558919 CLPTM1LQ96KA5 538 aa4.87□□□□□ -1.63
VPS13C-207ENST00000558919 MLST8Q9BVC4 326 aa4.87□□□□□ -1.63
VPS13C-207ENST00000558919 RNPEPQ9H4A4 650 aa4.87□□□□□ -1.63
VPS13C-207ENST00000558919 GSTO2Q9H4Y5 243 aa4.87□□□□□ -1.63
VPS13C-207ENST00000558919 TCF7L1Q9HCS4 588 aa4.87□□□□□ -1.63
VPS13C-207ENST00000558919 DDX56Q9NY93 547 aaKnown RBP4.87□□□□□ -1.63
VPS13C-207ENST00000558919 A0A1B0GTW7 788 aa4.86□□□□□ -1.63
VPS13C-207ENST00000558919 KIAA0391O15091 583 aaKnown RBP4.86□□□□□ -1.63
VPS13C-207ENST00000558919 PDGFRBP09619 1106 aa4.86□□□□□ -1.63
VPS13C-207ENST00000558919 VCAM1P19320 739 aa4.86□□□□□ -1.63
VPS13C-207ENST00000558919 SLC6A2P23975 617 aa4.86□□□□□ -1.63
VPS13C-207ENST00000558919 TAP1Q03518 808 aa4.86□□□□□ -1.63
VPS13C-207ENST00000558919 TLE1Q04724 770 aa4.86□□□□□ -1.63
VPS13C-207ENST00000558919 MRGPRGQ86SM5 289 aa4.86□□□□□ -1.63
VPS13C-207ENST00000558919 TMEM132CQ8N3T6 1108 aa4.86□□□□□ -1.63
VPS13C-207ENST00000558919 CPEB3Q8NE35 698 aaKnown RBP4.86□□□□□ -1.63
VPS13C-207ENST00000558919 IL17RDQ8NFM7 739 aa4.86□□□□□ -1.63
VPS13C-207ENST00000558919 KAT5Q92993 513 aa4.86□□□□□ -1.63
VPS13C-207ENST00000558919 RAB24Q969Q5 203 aa4.86□□□□□ -1.63
VPS13C-207ENST00000558919 DMRTA2Q96SC8 542 aa4.86□□□□□ -1.63
VPS13C-207ENST00000558919 MAN1C1Q9NR34 630 aa4.86□□□□□ -1.63
VPS13C-207ENST00000558919 LUC7L2Q9Y383 392 aaKnown RBP4.86□□□□□ -1.63
VPS13C-207ENST00000558919 WDR33Q9C0J8 1336 aaKnown RBP4.86□□□□□ -1.63
VPS13C-207ENST00000558919 COL4A3Q01955 1670 aa4.86□□□□□ -1.63
VPS13C-207ENST00000558919 GRM6O15303 877 aa4.85□□□□□ -1.63
VPS13C-207ENST00000558919 FOXN1O15353 648 aa4.85□□□□□ -1.63
VPS13C-207ENST00000558919 LPXNO60711 386 aa4.85□□□□□ -1.63
VPS13C-207ENST00000558919 HAUS5O94927 633 aa4.85□□□□□ -1.63
VPS13C-207ENST00000558919 PRSS23O95084 383 aa4.85□□□□□ -1.63
VPS13C-207ENST00000558919 ELANEP08246 267 aa4.85□□□□□ -1.63
VPS13C-207ENST00000558919 KRT4P19013 534 aa4.85□□□□□ -1.63
VPS13C-207ENST00000558919 PDCP20941 246 aa4.85□□□□□ -1.63
VPS13C-207ENST00000558919 DDX6P26196 483 aaKnown RBP eCLIP4.85□□□□□ -1.63
VPS13C-207ENST00000558919 ZNF280AP59817 542 aaPredicted RBP4.85□□□□□ -1.63
VPS13C-207ENST00000558919 GUCY1B3Q02153 619 aa4.85□□□□□ -1.63
VPS13C-207ENST00000558919 DSC2Q02487 901 aa4.85□□□□□ -1.63
VPS13C-207ENST00000558919 OCA2Q04671 838 aa4.85□□□□□ -1.63
VPS13C-207ENST00000558919 RESTQ13127 1097 aa4.85□□□□□ -1.63
VPS13C-207ENST00000558919 SPDYE7PQ495Y7 208 aa4.85□□□□□ -1.63
VPS13C-207ENST00000558919 B3GNTL1Q67FW5 361 aaPredicted RBP4.85□□□□□ -1.63
VPS13C-207ENST00000558919 GADL1Q6ZQY3 521 aa4.85□□□□□ -1.63
VPS13C-207ENST00000558919 FAM43AQ8N2R8 423 aa4.85□□□□□ -1.63
VPS13C-207ENST00000558919 PRR18Q8N4B5 295 aa4.85□□□□□ -1.63
VPS13C-207ENST00000558919 STAG1Q8WVM7 1258 aa4.85□□□□□ -1.63
VPS13C-207ENST00000558919 HSPBAP1Q96EW2 488 aa4.85□□□□□ -1.63
VPS13C-207ENST00000558919 BOD1Q96IK1 185 aa4.85□□□□□ -1.63
VPS13C-207ENST00000558919 CEP89Q96ST8 783 aa4.85□□□□□ -1.63
VPS13C-207ENST00000558919 PNKPQ96T60 521 aa4.85□□□□□ -1.63
VPS13C-207ENST00000558919 ADAM2Q99965 735 aa4.85□□□□□ -1.63
VPS13C-207ENST00000558919 SERHL2Q9H4I8 314 aa4.85□□□□□ -1.63
VPS13C-207ENST00000558919 TMEM74BQ9NUR3 256 aa4.85□□□□□ -1.63
VPS13C-207ENST00000558919 CDHR4A6H8M9 788 aa4.84□□□□□ -1.63
VPS13C-207ENST00000558919 SLC16A6O15403 523 aa4.84□□□□□ -1.63
VPS13C-207ENST00000558919 B3GALT2O43825 422 aa4.84□□□□□ -1.63
VPS13C-207ENST00000558919 DTNBO60941 627 aa4.84□□□□□ -1.63
VPS13C-207ENST00000558919 SLC43A1O75387 559 aa4.84□□□□□ -1.63
VPS13C-207ENST00000558919 ALDH1L1O75891 902 aa4.84□□□□□ -1.63
VPS13C-207ENST00000558919 CDKL5O76039 1030 aa4.84□□□□□ -1.63
VPS13C-207ENST00000558919 ARIH2O95376 493 aa4.84□□□□□ -1.63
VPS13C-207ENST00000558919 IL33O95760 270 aa4.84□□□□□ -1.63
VPS13C-207ENST00000558919 GPANK1O95872 356 aa4.84□□□□□ -1.63
VPS13C-207ENST00000558919 POU2F2P09086 479 aa4.84□□□□□ -1.63
VPS13C-207ENST00000558919 FGFR4P22455 802 aa4.84□□□□□ -1.63
VPS13C-207ENST00000558919 AKAP5P24588 427 aa4.84□□□□□ -1.63
VPS13C-207ENST00000558919 ZEB1P37275 1124 aaPredicted RBP4.84□□□□□ -1.63
VPS13C-207ENST00000558919 FXR1P51114 621 aaKnown RBP eCLIP4.84□□□□□ -1.63
VPS13C-207ENST00000558919 NOMO3P69849 1222 aa4.84□□□□□ -1.63
VPS13C-207ENST00000558919 NOMO2Q5JPE7 1267 aa4.84□□□□□ -1.63
VPS13C-207ENST00000558919 THEMIS2Q5TEJ8 643 aa4.84□□□□□ -1.63
VPS13C-207ENST00000558919 LAIR1Q6GTX8 287 aa4.84□□□□□ -1.63
VPS13C-207ENST00000558919 FOXR2Q6PJQ5 311 aa4.84□□□□□ -1.63
VPS13C-207ENST00000558919 TBC1D15Q8TC07 691 aa4.84□□□□□ -1.63
VPS13C-207ENST00000558919 FUBP1Q96AE4 644 aaKnown RBP4.84□□□□□ -1.63
VPS13C-207ENST00000558919 CHFRQ96EP1 664 aa4.84□□□□□ -1.63
VPS13C-207ENST00000558919 MED15Q96RN5 788 aa4.84□□□□□ -1.63
VPS13C-207ENST00000558919 NUP88Q99567 741 aaPredicted RBP4.84□□□□□ -1.63
VPS13C-207ENST00000558919 ZSWIM1Q9BR11 485 aa4.84□□□□□ -1.63
VPS13C-207ENST00000558919 AASDHPPTQ9NRN7 309 aa4.84□□□□□ -1.63
VPS13C-207ENST00000558919 JKAMPQ9P055 326 aa4.84□□□□□ -1.63
VPS13C-207ENST00000558919 RNF181Q9P0P0 153 aa4.84□□□□□ -1.63
VPS13C-207ENST00000558919 ANKFY1Q9P2R3 1169 aa4.84□□□□□ -1.63
VPS13C-207ENST00000558919 KCNE5Q9UJ90 142 aa4.84□□□□□ -1.63
VPS13C-207ENST00000558919 POLHQ9Y253 713 aa4.84□□□□□ -1.63
VPS13C-207ENST00000558919 MAP3K2Q9Y2U5 619 aa4.84□□□□□ -1.63
VPS13C-207ENST00000558919 NOX1Q9Y5S8 564 aa4.84□□□□□ -1.63
VPS13C-207ENST00000558919 A0A087X1B8 175 aa4.83□□□□□ -1.64
VPS13C-207ENST00000558919 E2F8A0AVK6 867 aa4.83□□□□□ -1.64
VPS13C-207ENST00000558919 PIPSLA2A3N6 862 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms