RNA–Protein interactions for RNA: ENST00000558117.1

RTF1-204, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-204ENST00000558117 SHTN1A0MZ66 631 aa7.57□□□□□ -1.2
RTF1-204ENST00000558117 PRSS38A1L453 326 aa7.57□□□□□ -1.2
RTF1-204ENST00000558117 KLRG2A4D1S0 409 aaPredicted RBP7.57□□□□□ -1.2
RTF1-204ENST00000558117 GPR39O43194 453 aa7.57□□□□□ -1.2
RTF1-204ENST00000558117 H2AFYO75367 372 aaKnown RBP7.57□□□□□ -1.2
RTF1-204ENST00000558117 ULK1O75385 1050 aa7.57□□□□□ -1.2
RTF1-204ENST00000558117 NPR1P16066 1061 aa7.57□□□□□ -1.2
RTF1-204ENST00000558117 CXCL9Q07325 125 aa7.57□□□□□ -1.2
RTF1-204ENST00000558117 TBR1Q16650 682 aa7.57□□□□□ -1.2
RTF1-204ENST00000558117 KLHDC10Q6PID8 442 aa7.57□□□□□ -1.2
RTF1-204ENST00000558117 ESPNLQ6ZVH7 1005 aa7.57□□□□□ -1.2
RTF1-204ENST00000558117 CMIPQ8IY22 773 aa7.57□□□□□ -1.2
RTF1-204ENST00000558117 MAFAQ8NHW3 353 aaPredicted RBP7.57□□□□□ -1.2
RTF1-204ENST00000558117 FERMT2Q96AC1 680 aa7.57□□□□□ -1.2
RTF1-204ENST00000558117 USP36Q9P275 1121 aaKnown RBP7.57□□□□□ -1.2
RTF1-204ENST00000558117 SYNPO2Q9UMS6 1093 aa7.57□□□□□ -1.2
RTF1-204ENST00000558117 OAZ3Q9UMX2 235 aa7.57□□□□□ -1.2
RTF1-204ENST00000558117 VWA7Q9Y334 891 aa7.57□□□□□ -1.2
RTF1-204ENST00000558117 A0A1W2PP64 1363 aa7.57□□□□□ -1.2
RTF1-204ENST00000558117 TONSLQ96HA7 1378 aa7.57□□□□□ -1.2
RTF1-204ENST00000558117 NPC1L1Q9UHC9 1359 aa7.57□□□□□ -1.2
RTF1-204ENST00000558117 CDHR2Q9BYE9 1310 aa7.56□□□□□ -1.2
RTF1-204ENST00000558117 TJP1Q07157 1748 aa7.56□□□□□ -1.2
RTF1-204ENST00000558117 NCAPD2Q15021 1401 aa7.56□□□□□ -1.2
RTF1-204ENST00000558117 GPR42O15529 346 aa7.56□□□□□ -1.2
RTF1-204ENST00000558117 KDM1AO60341 852 aa7.56□□□□□ -1.2
RTF1-204ENST00000558117 CDC14BO60729 498 aa7.56□□□□□ -1.2
RTF1-204ENST00000558117 CLEC2LP0C7M8 214 aa7.56□□□□□ -1.2
RTF1-204ENST00000558117 CPEP16870 476 aa7.56□□□□□ -1.2
RTF1-204ENST00000558117 MAGEA10P43363 369 aaPredicted RBP7.56□□□□□ -1.2
RTF1-204ENST00000558117 NFYCQ13952 458 aa7.56□□□□□ -1.2
RTF1-204ENST00000558117 CXorf67Q86X51 503 aaPredicted RBP7.56□□□□□ -1.2
RTF1-204ENST00000558117 DNAJC10Q8IXB1 793 aa7.56□□□□□ -1.2
RTF1-204ENST00000558117 OR14K1Q8NGZ2 314 aa7.56□□□□□ -1.2
RTF1-204ENST00000558117 CD99L2Q8TCZ2 262 aa7.56□□□□□ -1.2
RTF1-204ENST00000558117 GFM2Q969S9 779 aaKnown RBP7.56□□□□□ -1.2
RTF1-204ENST00000558117 ERO1AQ96HE7 468 aa7.56□□□□□ -1.2
RTF1-204ENST00000558117 SSBP3Q9BWW4 388 aaPredicted RBP7.56□□□□□ -1.2
RTF1-204ENST00000558117 PITHD1Q9GZP4 211 aaPredicted RBP7.56□□□□□ -1.2
RTF1-204ENST00000558117 MTG2Q9H4K7 406 aa7.56□□□□□ -1.2
RTF1-204ENST00000558117 POLR3BQ9NW08 1133 aaPredicted RBP7.56□□□□□ -1.2
RTF1-204ENST00000558117 DENND2AQ9ULE3 1009 aa7.56□□□□□ -1.2
RTF1-204ENST00000558117 ATP8A1Q9Y2Q0 1164 aa7.56□□□□□ -1.2
RTF1-204ENST00000558117 PPP2R3BQ9Y5P8 575 aa7.56□□□□□ -1.2
RTF1-204ENST00000558117 BAHCC1Q9P281 2608 aa7.56□□□□□ -1.2
RTF1-204ENST00000558117 MYPNQ86TC9 1320 aa7.55□□□□□ -1.2
RTF1-204ENST00000558117 EDC4Q6P2E9 1401 aaKnown RBP7.55□□□□□ -1.2
RTF1-204ENST00000558117 PCDH8O95206 1070 aa7.55□□□□□ -1.2
RTF1-204ENST00000558117 CYP19A1P11511 503 aaPredicted RBP7.55□□□□□ -1.2
RTF1-204ENST00000558117 CR2P20023 1033 aa7.55□□□□□ -1.2
RTF1-204ENST00000558117 SESN3P58005 492 aa7.55□□□□□ -1.2
RTF1-204ENST00000558117 RRS1Q15050 365 aaKnown RBP7.55□□□□□ -1.2
RTF1-204ENST00000558117 SLC9C1Q4G0N8 1177 aa7.55□□□□□ -1.2
RTF1-204ENST00000558117 HSP90AB2PQ58FF8 381 aa7.55□□□□□ -1.2
RTF1-204ENST00000558117 IQSEC1Q6DN90 963 aa7.55□□□□□ -1.2
RTF1-204ENST00000558117 BMP8AQ7Z5Y6 402 aa7.55□□□□□ -1.2
RTF1-204ENST00000558117 TAX1BP1Q86VP1 789 aa7.55□□□□□ -1.2
RTF1-204ENST00000558117 CNBD1Q8NA66 436 aa7.55□□□□□ -1.2
RTF1-204ENST00000558117 COG1Q8WTW3 980 aa7.55□□□□□ -1.2
RTF1-204ENST00000558117 LPPQ93052 612 aa7.55□□□□□ -1.2
RTF1-204ENST00000558117 DYDC2Q96IM9 177 aa7.55□□□□□ -1.2
RTF1-204ENST00000558117 C8orf49Q96NF6 230 aa7.55□□□□□ -1.2
RTF1-204ENST00000558117 GNRHR2Q96P88 292 aa7.55□□□□□ -1.2
RTF1-204ENST00000558117 PRDM12Q9H4Q4 367 aa7.55□□□□□ -1.2
RTF1-204ENST00000558117 ST6GALNAC2Q9UJ37 374 aa7.55□□□□□ -1.2
RTF1-204ENST00000558117 TMPRSS11EQ9UL52 423 aa7.55□□□□□ -1.2
RTF1-204ENST00000558117 ZBTB1Q9Y2K1 713 aa7.55□□□□□ -1.2
RTF1-204ENST00000558117 ANKRD26Q9UPS8 1709 aa7.55□□□□□ -1.2
RTF1-204ENST00000558117 A0A0A6YYJ9 748 aa7.54□□□□□ -1.2
RTF1-204ENST00000558117 OPHN1O60890 802 aa7.54□□□□□ -1.2
RTF1-204ENST00000558117 PRKD3O94806 890 aa7.54□□□□□ -1.2
RTF1-204ENST00000558117 ADRB1P08588 477 aa7.54□□□□□ -1.2
RTF1-204ENST00000558117 MANFP55145 182 aaKnown RBP7.54□□□□□ -1.2
RTF1-204ENST00000558117 SREBF2Q12772 1141 aa7.54□□□□□ -1.2
RTF1-204ENST00000558117 ADAM15Q13444 863 aa7.54□□□□□ -1.2
RTF1-204ENST00000558117 HS1BP3Q53T59 392 aa7.54□□□□□ -1.2
RTF1-204ENST00000558117 GCDHQ92947 438 aaPredicted RBP7.54□□□□□ -1.2
RTF1-204ENST00000558117 DPYSL5Q9BPU6 564 aa7.54□□□□□ -1.2
RTF1-204ENST00000558117 HAPLN2Q9GZV7 340 aa7.54□□□□□ -1.2
RTF1-204ENST00000558117 DEF6Q9H4E7 631 aa7.54□□□□□ -1.2
RTF1-204ENST00000558117 MSL2Q9HCI7 577 aa7.54□□□□□ -1.2
RTF1-204ENST00000558117 CNOT7Q9UIV1 285 aaKnown RBP7.54□□□□□ -1.2
RTF1-204ENST00000558117 TCAF1Q9Y4C2 921 aa7.54□□□□□ -1.2
RTF1-204ENST00000558117 A0A0A6YYK5 440 aaPredicted RBP7.53□□□□□ -1.2
RTF1-204ENST00000558117 ANKRD62A6NC57 917 aa7.53□□□□□ -1.2
RTF1-204ENST00000558117 PFKMP08237 780 aa7.53□□□□□ -1.2
RTF1-204ENST00000558117 CDKN1CP49918 316 aaPredicted RBP7.53□□□□□ -1.2
RTF1-204ENST00000558117 FKBP1BP68106 108 aa7.53□□□□□ -1.2
RTF1-204ENST00000558117 ICAM4Q14773 271 aa7.53□□□□□ -1.2
RTF1-204ENST00000558117 CT83Q5H943 113 aa7.53□□□□□ -1.2
RTF1-204ENST00000558117 RNF219Q5W0B1 726 aaPredicted RBP7.53□□□□□ -1.2
RTF1-204ENST00000558117 MOB2Q70IA6 237 aa7.53□□□□□ -1.2
RTF1-204ENST00000558117 SPATS2Q86XZ4 545 aaKnown RBP7.53□□□□□ -1.2
RTF1-204ENST00000558117 LYSMD2Q8IV50 215 aa7.53□□□□□ -1.2
RTF1-204ENST00000558117 TDHQ8IZJ6 230 aa7.53□□□□□ -1.2
RTF1-204ENST00000558117 NKD2Q969F2 451 aaPredicted RBP7.53□□□□□ -1.2
RTF1-204ENST00000558117 SLC7A6OSQ96CW6 309 aaPredicted RBP7.53□□□□□ -1.2
RTF1-204ENST00000558117 CDCA5Q96FF9 252 aa7.53□□□□□ -1.2
RTF1-204ENST00000558117 BORCS6Q96GS4 357 aa7.53□□□□□ -1.2
RTF1-204ENST00000558117 HIST1H2AHQ96KK5 128 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms