RNA–Protein interactions for RNA: ENST00000557948.1

TRPM1-204, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

TSL 2

Gene TRPM1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-204ENST00000557948 TAF1BQ53T94 588 aaPredicted RBP6.54□□□□□ -1.36
TRPM1-204ENST00000557948 RRP12Q5JTH9 1297 aaKnown RBP6.54□□□□□ -1.36
TRPM1-204ENST00000557948 DGKKQ5KSL6 1271 aa6.54□□□□□ -1.36
TRPM1-204ENST00000557948 TEX35Q5T0J7 233 aa6.54□□□□□ -1.36
TRPM1-204ENST00000557948 GPATCH4Q5T3I0 446 aaKnown RBP6.54□□□□□ -1.36
TRPM1-204ENST00000557948 C1orf228Q6PIY5 440 aa6.54□□□□□ -1.36
TRPM1-204ENST00000557948 KRT25Q7Z3Z0 450 aa6.54□□□□□ -1.36
TRPM1-204ENST00000557948 ZNF280BQ86YH2 543 aa6.54□□□□□ -1.36
TRPM1-204ENST00000557948 ERC1Q8IUD2 1116 aa6.54□□□□□ -1.36
TRPM1-204ENST00000557948 NPAS3Q8IXF0 933 aa6.54□□□□□ -1.36
TRPM1-204ENST00000557948 TXLNBQ8N3L3 684 aa6.54□□□□□ -1.36
TRPM1-204ENST00000557948 HDDC3Q8N4P3 179 aa6.54□□□□□ -1.36
TRPM1-204ENST00000557948 KIAA1524Q8TCG1 905 aa6.54□□□□□ -1.36
TRPM1-204ENST00000557948 ADAMTS14Q8WXS8 1223 aa6.54□□□□□ -1.36
TRPM1-204ENST00000557948 ELSPBP1Q96BH3 223 aa6.54□□□□□ -1.36
TRPM1-204ENST00000557948 INPP4AQ96PE3 977 aaPredicted RBP6.54□□□□□ -1.36
TRPM1-204ENST00000557948 SENP7Q9BQF6 1050 aa6.54□□□□□ -1.36
TRPM1-204ENST00000557948 TRMT61BQ9BVS5 477 aaKnown RBP6.54□□□□□ -1.36
TRPM1-204ENST00000557948 NACAP1Q9BZK3 213 aa6.54□□□□□ -1.36
TRPM1-204ENST00000557948 UBA5Q9GZZ9 404 aa6.54□□□□□ -1.36
TRPM1-204ENST00000557948 RASSF4Q9H2L5 321 aa6.54□□□□□ -1.36
TRPM1-204ENST00000557948 CPVLQ9H3G5 476 aa6.54□□□□□ -1.36
TRPM1-204ENST00000557948 BOLA2Q9H3K6 86 aa6.54□□□□□ -1.36
TRPM1-204ENST00000557948 TBC1D13Q9NVG8 400 aa6.54□□□□□ -1.36
TRPM1-204ENST00000557948 RTEL1Q9NZ71 1219 aa6.54□□□□□ -1.36
TRPM1-204ENST00000557948 DNAJB4Q9UDY4 337 aa6.54□□□□□ -1.36
TRPM1-204ENST00000557948 INPP5FQ9Y2H2 1132 aa6.54□□□□□ -1.36
TRPM1-204ENST00000557948 V9GYY5 206 aaPredicted RBP6.54□□□□□ -1.36
TRPM1-204ENST00000557948 GOLGA4Q13439 2230 aaKnown RBP6.54□□□□□ -1.36
TRPM1-204ENST00000557948 NOTCH4Q99466 2003 aa6.54□□□□□ -1.36
TRPM1-204ENST00000557948 FBN2P35556 2912 aa6.53□□□□□ -1.36
TRPM1-204ENST00000557948 ADAMTS9Q9P2N4 1935 aa6.53□□□□□ -1.36
TRPM1-204ENST00000557948 A0A0U1RQF3 1178 aa6.53□□□□□ -1.36
TRPM1-204ENST00000557948 GSTTP1A0A1W2PQM5 241 aa6.53□□□□□ -1.36
TRPM1-204ENST00000557948 MEFVO15553 781 aaPredicted RBP6.53□□□□□ -1.36
TRPM1-204ENST00000557948 XYLBO75191 536 aa6.53□□□□□ -1.36
TRPM1-204ENST00000557948 IFIT2P09913 472 aaKnown RBP6.53□□□□□ -1.36
TRPM1-204ENST00000557948 GP1BBP13224 206 aa6.53□□□□□ -1.36
TRPM1-204ENST00000557948 GBP1P32455 592 aa6.53□□□□□ -1.36
TRPM1-204ENST00000557948 NCBP1Q09161 790 aaKnown RBP6.53□□□□□ -1.36
TRPM1-204ENST00000557948 SEMA3BQ13214 749 aa6.53□□□□□ -1.36
TRPM1-204ENST00000557948 KARSQ15046 597 aaKnown RBP6.53□□□□□ -1.36
TRPM1-204ENST00000557948 QRICH1Q2TAL8 776 aa6.53□□□□□ -1.36
TRPM1-204ENST00000557948 NOMO2Q5JPE7 1267 aa6.53□□□□□ -1.36
TRPM1-204ENST00000557948 PPM1LQ5SGD2 360 aa6.53□□□□□ -1.36
TRPM1-204ENST00000557948 LIN9Q5TKA1 542 aa6.53□□□□□ -1.36
TRPM1-204ENST00000557948 ICE2Q659A1 982 aa6.53□□□□□ -1.36
TRPM1-204ENST00000557948 MCTP1Q6DN14 999 aa6.53□□□□□ -1.36
TRPM1-204ENST00000557948 TANGO2Q6ICL3 276 aa6.53□□□□□ -1.36
TRPM1-204ENST00000557948 GLB1LQ6UWU2 654 aa6.53□□□□□ -1.36
TRPM1-204ENST00000557948 LRRC69Q6ZNQ3 347 aa6.53□□□□□ -1.36
TRPM1-204ENST00000557948 GPR155Q7Z3F1 870 aa6.53□□□□□ -1.36
TRPM1-204ENST00000557948 CYP2U1Q7Z449 544 aa6.53□□□□□ -1.36
TRPM1-204ENST00000557948 ZNF598Q86UK7 904 aaKnown RBP6.53□□□□□ -1.36
TRPM1-204ENST00000557948 FCHSD1Q86WN1 690 aa6.53□□□□□ -1.36
TRPM1-204ENST00000557948 GLYCTKQ8IVS8 523 aa6.53□□□□□ -1.36
TRPM1-204ENST00000557948 ADGRF4Q8IZF3 695 aa6.53□□□□□ -1.36
TRPM1-204ENST00000557948 IFNL3Q8IZI9 196 aa6.53□□□□□ -1.36
TRPM1-204ENST00000557948 PNPLA1Q8N8W4 532 aa6.53□□□□□ -1.36
TRPM1-204ENST00000557948 MNS1Q8NEH6 495 aa6.53□□□□□ -1.36
TRPM1-204ENST00000557948 ING5Q8WYH8 240 aa6.53□□□□□ -1.36
TRPM1-204ENST00000557948 MCRS1Q96EZ8 462 aa6.53□□□□□ -1.36
TRPM1-204ENST00000557948 KIF2CQ99661 725 aa6.53□□□□□ -1.36
TRPM1-204ENST00000557948 HERC2P3Q9BVR0 1158 aa6.53□□□□□ -1.36
TRPM1-204ENST00000557948 NUSAP1Q9BXS6 441 aaKnown RBP6.53□□□□□ -1.36
TRPM1-204ENST00000557948 NAPBQ9H115 298 aa6.53□□□□□ -1.36
TRPM1-204ENST00000557948 AZI2Q9H6S1 392 aa6.53□□□□□ -1.36
TRPM1-204ENST00000557948 RXFP1Q9HBX9 757 aa6.53□□□□□ -1.36
TRPM1-204ENST00000557948 ZNF334Q9HCZ1 680 aaPredicted RBP6.53□□□□□ -1.36
TRPM1-204ENST00000557948 IL1RAPL2Q9NP60 686 aa6.53□□□□□ -1.36
TRPM1-204ENST00000557948 TRPV5Q9NQA5 729 aa6.53□□□□□ -1.36
TRPM1-204ENST00000557948 ZNF358Q9NW07 568 aa6.53□□□□□ -1.36
TRPM1-204ENST00000557948 GDE1Q9NZC3 331 aa6.53□□□□□ -1.36
TRPM1-204ENST00000557948 DDX19BQ9UMR2 479 aa6.53□□□□□ -1.36
TRPM1-204ENST00000557948 SLC8A2Q9UPR5 921 aa6.53□□□□□ -1.36
TRPM1-204ENST00000557948 ZMYM2Q9UBW7 1377 aa6.53□□□□□ -1.36
TRPM1-204ENST00000557948 ATG2BQ96BY7 2078 aa6.53□□□□□ -1.36
TRPM1-204ENST00000557948 COL5A1P20908 1838 aaPredicted RBP6.53□□□□□ -1.36
TRPM1-204ENST00000557948 RELNP78509 3460 aa6.52□□□□□ -1.37
TRPM1-204ENST00000557948 MUC22E2RYF6 1773 aaPredicted RBP6.52□□□□□ -1.37
TRPM1-204ENST00000557948 MGAQ8IWI9 3026 aa6.52□□□□□ -1.37
TRPM1-204ENST00000557948 SOWAHDA6NJG2 315 aa6.52□□□□□ -1.37
TRPM1-204ENST00000557948 KIF2AO00139 706 aaPredicted RBP6.52□□□□□ -1.37
TRPM1-204ENST00000557948 OPLAHO14841 1288 aa6.52□□□□□ -1.37
TRPM1-204ENST00000557948 CCL16O15467 120 aa6.52□□□□□ -1.37
TRPM1-204ENST00000557948 GPAA1O43292 621 aa6.52□□□□□ -1.37
TRPM1-204ENST00000557948 ATP8B1O43520 1251 aa6.52□□□□□ -1.37
TRPM1-204ENST00000557948 EXTL3O43909 919 aa6.52□□□□□ -1.37
TRPM1-204ENST00000557948 TUBB4AP04350 444 aa6.52□□□□□ -1.37
TRPM1-204ENST00000557948 ALDH2P05091 517 aa6.52□□□□□ -1.37
TRPM1-204ENST00000557948 HNRNPA1P09651 372 aaKnown RBP eCLIP6.52□□□□□ -1.37
TRPM1-204ENST00000557948 FTH1P19P0C7X4 201 aa6.52□□□□□ -1.37
TRPM1-204ENST00000557948 SNHG28P0DPA3 235 aa6.52□□□□□ -1.37
TRPM1-204ENST00000557948 KLRC1P26715 233 aa6.52□□□□□ -1.37
TRPM1-204ENST00000557948 ITPKBP27987 946 aa6.52□□□□□ -1.37
TRPM1-204ENST00000557948 GDI1P31150 447 aa6.52□□□□□ -1.37
TRPM1-204ENST00000557948 NOP2P46087 812 aaKnown RBP6.52□□□□□ -1.37
TRPM1-204ENST00000557948 MCM2P49736 904 aa6.52□□□□□ -1.37
TRPM1-204ENST00000557948 MRPS9P82933 396 aaKnown RBP6.52□□□□□ -1.37
TRPM1-204ENST00000557948 GHRHRQ02643 423 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms