RNA–Protein interactions for RNA: ENST00000557727.1

CHD8-214, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

Gene CHD8, Length 1,146 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-214ENST00000557727 SCARA3Q6AZY7 606 aa9.82□□□□□ -0.84
CHD8-214ENST00000557727 SLFN12LQ6IEE8 588 aa9.82□□□□□ -0.84
CHD8-214ENST00000557727 GLB1LQ6UWU2 654 aa9.82□□□□□ -0.84
CHD8-214ENST00000557727 CD300LGQ6UXG3 332 aa9.82□□□□□ -0.84
CHD8-214ENST00000557727 TREML4Q6UXN2 200 aa9.82□□□□□ -0.84
CHD8-214ENST00000557727 STXBP4Q6ZWJ1 553 aa9.82□□□□□ -0.84
CHD8-214ENST00000557727 TMEM173Q86WV6 379 aaPredicted RBP9.82□□□□□ -0.84
CHD8-214ENST00000557727 CBWD2Q8IUF1 395 aa9.82□□□□□ -0.84
CHD8-214ENST00000557727 COLGALT2Q8IYK4 626 aa9.82□□□□□ -0.84
CHD8-214ENST00000557727 LRRC43Q8N309 656 aa9.82□□□□□ -0.84
CHD8-214ENST00000557727 TRIML1Q8N9V2 468 aa9.82□□□□□ -0.84
CHD8-214ENST00000557727 PLEKHO2Q8TD55 490 aa9.82□□□□□ -0.84
CHD8-214ENST00000557727 BCL7CQ8WUZ0 217 aaPredicted RBP9.82□□□□□ -0.84
CHD8-214ENST00000557727 RSPH1Q8WYR4 309 aa9.82□□□□□ -0.84
CHD8-214ENST00000557727 POMGNT1Q8WZA1 660 aa9.82□□□□□ -0.84
CHD8-214ENST00000557727 CCDC34Q96HJ3 373 aa9.82□□□□□ -0.84
CHD8-214ENST00000557727 TCHPQ9BT92 498 aa9.82□□□□□ -0.84
CHD8-214ENST00000557727 PCIF1Q9H4Z3 704 aa9.82□□□□□ -0.84
CHD8-214ENST00000557727 UBN1Q9NPG3 1134 aa9.82□□□□□ -0.84
CHD8-214ENST00000557727 RMND1Q9NWS8 449 aa9.82□□□□□ -0.84
CHD8-214ENST00000557727 HSPBP1Q9NZL4 362 aa9.82□□□□□ -0.84
CHD8-214ENST00000557727 CACNG4Q9UBN1 327 aa9.82□□□□□ -0.84
CHD8-214ENST00000557727 DNAJB4Q9UDY4 337 aa9.82□□□□□ -0.84
CHD8-214ENST00000557727 HOOK1Q9UJC3 728 aaKnown RBP9.82□□□□□ -0.84
CHD8-214ENST00000557727 AGO2Q9UKV8 859 aaKnown RBP9.82□□□□□ -0.84
CHD8-214ENST00000557727 PTPRJQ12913 1337 aa9.82□□□□□ -0.84
CHD8-214ENST00000557727 TMEM265A0A087WTH1 108 aa9.81□□□□□ -0.84
CHD8-214ENST00000557727 SMIM28A0A1B0GU29 152 aa9.81□□□□□ -0.84
CHD8-214ENST00000557727 GOLGA8IPA6NC78 632 aa9.81□□□□□ -0.84
CHD8-214ENST00000557727 TRIM49BA6NDI0 452 aa9.81□□□□□ -0.84
CHD8-214ENST00000557727 GOLGA8JA6NMD2 632 aa9.81□□□□□ -0.84
CHD8-214ENST00000557727 LACTBL1A8MY62 500 aa9.81□□□□□ -0.84
CHD8-214ENST00000557727 C5orf67F2Z3F1 127 aa9.81□□□□□ -0.84
CHD8-214ENST00000557727 F8W810 466 aa9.81□□□□□ -0.84
CHD8-214ENST00000557727 AXIN1O15169 862 aa9.81□□□□□ -0.84
CHD8-214ENST00000557727 EXTL3O43909 919 aa9.81□□□□□ -0.84
CHD8-214ENST00000557727 POMCP01189 267 aa9.81□□□□□ -0.84
CHD8-214ENST00000557727 PBX3P40426 434 aa9.81□□□□□ -0.84
CHD8-214ENST00000557727 CASP4P49662 377 aa9.81□□□□□ -0.84
CHD8-214ENST00000557727 GRIK3Q13003 919 aa9.81□□□□□ -0.84
CHD8-214ENST00000557727 CAMK1Q14012 370 aa9.81□□□□□ -0.84
CHD8-214ENST00000557727 TMEM132AQ24JP5 1023 aa9.81□□□□□ -0.84
CHD8-214ENST00000557727 KLHL40Q2TBA0 621 aa9.81□□□□□ -0.84
CHD8-214ENST00000557727 DPCR1Q3MIW9 517 aa9.81□□□□□ -0.84
CHD8-214ENST00000557727 GLRA4Q5JXX5 417 aa9.81□□□□□ -0.84
CHD8-214ENST00000557727 LCE2AQ5TA79 106 aaPredicted RBP9.81□□□□□ -0.84
CHD8-214ENST00000557727 TTI2Q6NXR4 508 aa9.81□□□□□ -0.84
CHD8-214ENST00000557727 ARMCX5Q6P1M9 558 aa9.81□□□□□ -0.84
CHD8-214ENST00000557727 BRSK2Q8IWQ3 736 aa9.81□□□□□ -0.84
CHD8-214ENST00000557727 EFCAB13Q8IY85 973 aa9.81□□□□□ -0.84
CHD8-214ENST00000557727 SYCP3Q8IZU3 236 aa9.81□□□□□ -0.84
CHD8-214ENST00000557727 FIBCD1Q8N539 461 aa9.81□□□□□ -0.84
CHD8-214ENST00000557727 COLGALT1Q8NBJ5 622 aa9.81□□□□□ -0.84
CHD8-214ENST00000557727 CXorf38Q8TB03 319 aa9.81□□□□□ -0.84
CHD8-214ENST00000557727 FAM84AQ96KN4 292 aa9.81□□□□□ -0.84
CHD8-214ENST00000557727 ACAP3Q96P50 834 aa9.81□□□□□ -0.84
CHD8-214ENST00000557727 DUSP9Q99956 384 aaKnown RBP9.81□□□□□ -0.84
CHD8-214ENST00000557727 PAAF1Q9BRP4 392 aa9.81□□□□□ -0.84
CHD8-214ENST00000557727 CCDC94Q9BW85 323 aaPredicted RBP9.81□□□□□ -0.84
CHD8-214ENST00000557727 VN1R3Q9BXE9 311 aa9.81□□□□□ -0.84
CHD8-214ENST00000557727 ZNF576Q9H609 170 aa9.81□□□□□ -0.84
CHD8-214ENST00000557727 PLEKHA5Q9HAU0 1116 aa9.81□□□□□ -0.84
CHD8-214ENST00000557727 MARCH5Q9NX47 278 aa9.81□□□□□ -0.84
CHD8-214ENST00000557727 CGNQ9P2M7 1197 aaKnown RBP9.81□□□□□ -0.84
CHD8-214ENST00000557727 PARP2Q9UGN5 583 aa9.81□□□□□ -0.84
CHD8-214ENST00000557727 MSRAQ9UJ68 235 aa9.81□□□□□ -0.84
CHD8-214ENST00000557727 INPP5FQ9Y2H2 1132 aa9.81□□□□□ -0.84
CHD8-214ENST00000557727 KIAA0391O15091 583 aaKnown RBP9.8□□□□□ -0.84
CHD8-214ENST00000557727 NR3C1P04150 777 aa9.8□□□□□ -0.84
CHD8-214ENST00000557727 ITGB1P05556 798 aa9.8□□□□□ -0.84
CHD8-214ENST00000557727 GALTP07902 379 aa9.8□□□□□ -0.84
CHD8-214ENST00000557727 NFICP08651 508 aa9.8□□□□□ -0.84
CHD8-214ENST00000557727 DNAJB1P25685 340 aa9.8□□□□□ -0.84
CHD8-214ENST00000557727 BMPR1AP36894 532 aa9.8□□□□□ -0.84
CHD8-214ENST00000557727 SLC11A1P49279 550 aa9.8□□□□□ -0.84
CHD8-214ENST00000557727 SPAG1Q07617 926 aa9.8□□□□□ -0.84
CHD8-214ENST00000557727 MYBPC2Q14324 1141 aa9.8□□□□□ -0.84
CHD8-214ENST00000557727 GRIN2CQ14957 1233 aa9.8□□□□□ -0.84
CHD8-214ENST00000557727 KYAT1Q16773 422 aa9.8□□□□□ -0.84
CHD8-214ENST00000557727 EDRF1Q3B7T1 1238 aa9.8□□□□□ -0.84
CHD8-214ENST00000557727 EPC2Q52LR7 807 aa9.8□□□□□ -0.84
CHD8-214ENST00000557727 C1orf220Q5T0J3 134 aa9.8□□□□□ -0.84
CHD8-214ENST00000557727 CCDC183Q5T5S1 534 aa9.8□□□□□ -0.84
CHD8-214ENST00000557727 PPP2R2DQ66LE6 453 aa9.8□□□□□ -0.84
CHD8-214ENST00000557727 ANKRD40Q6AI12 368 aa9.8□□□□□ -0.84
CHD8-214ENST00000557727 FOXR2Q6PJQ5 311 aa9.8□□□□□ -0.84
CHD8-214ENST00000557727 Q7L0L9 218 aa9.8□□□□□ -0.84
CHD8-214ENST00000557727 APBB1IPQ7Z5R6 666 aaPredicted RBP9.8□□□□□ -0.84
CHD8-214ENST00000557727 RNF168Q8IYW5 571 aaPredicted RBP9.8□□□□□ -0.84
CHD8-214ENST00000557727 SLC39A11Q8N1S5 342 aa9.8□□□□□ -0.84
CHD8-214ENST00000557727 GPD1LQ8N335 351 aa9.8□□□□□ -0.84
CHD8-214ENST00000557727 CCDC47Q96A33 483 aaKnown RBP9.8□□□□□ -0.84
CHD8-214ENST00000557727 C18orf25Q96B23 403 aaPredicted RBP9.8□□□□□ -0.84
CHD8-214ENST00000557727 BORCS6Q96GS4 357 aa9.8□□□□□ -0.84
CHD8-214ENST00000557727 MFSD14AQ96MC6 490 aa9.8□□□□□ -0.84
CHD8-214ENST00000557727 FAM213AQ9BRX8 229 aa9.8□□□□□ -0.84
CHD8-214ENST00000557727 MRPL9Q9BYD2 267 aaKnown RBP9.8□□□□□ -0.84
CHD8-214ENST00000557727 GOLGA2P5Q9HBQ8 144 aa9.8□□□□□ -0.84
CHD8-214ENST00000557727 TUBGCP4Q9UGJ1 667 aa9.8□□□□□ -0.84
CHD8-214ENST00000557727 DACH1Q9UI36 760 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms