RNA–Protein interactions for RNA: ENST00000556737.1

SHMT2-224, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-224ENST00000556737 AXDND1Q5T1B0 1012 aaPredicted RBP11.26□□□□□ -0.61
SHMT2-224ENST00000556737 SHC4Q6S5L8 630 aa11.26□□□□□ -0.61
SHMT2-224ENST00000556737 RSPO2Q6UXX9 243 aaPredicted RBP11.26□□□□□ -0.61
SHMT2-224ENST00000556737 CCDC73Q6ZRK6 1079 aa11.26□□□□□ -0.61
SHMT2-224ENST00000556737 SV2BQ7L1I2 683 aa11.26□□□□□ -0.61
SHMT2-224ENST00000556737 ZNF720Q7Z2F6 126 aa11.26□□□□□ -0.61
SHMT2-224ENST00000556737 CEP57Q86XR8 500 aa11.26□□□□□ -0.61
SHMT2-224ENST00000556737 EDAQ92838 391 aa11.26□□□□□ -0.61
SHMT2-224ENST00000556737 HVCN1Q96D96 273 aa11.26□□□□□ -0.61
SHMT2-224ENST00000556737 OLFML3Q9NRN5 406 aa11.26□□□□□ -0.61
SHMT2-224ENST00000556737 NR2E1Q9Y466 385 aa11.26□□□□□ -0.61
SHMT2-224ENST00000556737 STYXL1Q9Y6J8 313 aa11.26□□□□□ -0.61
SHMT2-224ENST00000556737 DOCK8Q8NF50 2099 aa11.26□□□□□ -0.61
SHMT2-224ENST00000556737 CCDC195A0A1B0GUA6 201 aa11.25□□□□□ -0.61
SHMT2-224ENST00000556737 SPDYE4A6NLX3 237 aa11.25□□□□□ -0.61
SHMT2-224ENST00000556737 CUTAO60888 179 aa11.25□□□□□ -0.61
SHMT2-224ENST00000556737 ZMYND10O75800 440 aa11.25□□□□□ -0.61
SHMT2-224ENST00000556737 GAP43P17677 238 aa11.25□□□□□ -0.61
SHMT2-224ENST00000556737 LRPAP1P30533 357 aa11.25□□□□□ -0.61
SHMT2-224ENST00000556737 ABCD1P33897 745 aa11.25□□□□□ -0.61
SHMT2-224ENST00000556737 MATR3P43243 847 aaKnown RBP eCLIP11.25□□□□□ -0.61
SHMT2-224ENST00000556737 ZXDAP98168 799 aa11.25□□□□□ -0.61
SHMT2-224ENST00000556737 PPP2R3AQ06190 1150 aa11.25□□□□□ -0.61
SHMT2-224ENST00000556737 SPAG1Q07617 926 aa11.25□□□□□ -0.61
SHMT2-224ENST00000556737 KCNA1Q09470 495 aa11.25□□□□□ -0.61
SHMT2-224ENST00000556737 FOXD4L6Q3SYB3 417 aaPredicted RBP11.25□□□□□ -0.61
SHMT2-224ENST00000556737 PDXDC1Q6P996 788 aa11.25□□□□□ -0.61
SHMT2-224ENST00000556737 FOXD4L3Q6VB84 417 aaPredicted RBP11.25□□□□□ -0.61
SHMT2-224ENST00000556737 CCDC149Q6ZUS6 474 aa11.25□□□□□ -0.61
SHMT2-224ENST00000556737 ZDHHC14Q8IZN3 488 aa11.25□□□□□ -0.61
SHMT2-224ENST00000556737 PDILTQ8N807 584 aa11.25□□□□□ -0.61
SHMT2-224ENST00000556737 TDRD5Q8NAT2 981 aaKnown RBP11.25□□□□□ -0.61
SHMT2-224ENST00000556737 KREMEN2Q8NCW0 462 aa11.25□□□□□ -0.61
SHMT2-224ENST00000556737 PANK2Q9BZ23 570 aa11.25□□□□□ -0.61
SHMT2-224ENST00000556737 PLEKHA4Q9H4M7 779 aa11.25□□□□□ -0.61
SHMT2-224ENST00000556737 PLEKHA5Q9HAU0 1116 aa11.25□□□□□ -0.61
SHMT2-224ENST00000556737 KBTBD4Q9NVX7 518 aa11.25□□□□□ -0.61
SHMT2-224ENST00000556737 ZDHHC7Q9NXF8 308 aa11.25□□□□□ -0.61
SHMT2-224ENST00000556737 CPSF3Q9UKF6 684 aaKnown RBP11.25□□□□□ -0.61
SHMT2-224ENST00000556737 USTQ9Y2C2 406 aa11.25□□□□□ -0.61
SHMT2-224ENST00000556737 BACE2Q9Y5Z0 518 aa11.25□□□□□ -0.61
SHMT2-224ENST00000556737 CLUHO75153 1309 aa11.25□□□□□ -0.61
SHMT2-224ENST00000556737 ZNF318Q5VUA4 2279 aa11.25□□□□□ -0.61
SHMT2-224ENST00000556737 LACTBL1A8MY62 500 aa11.24□□□□□ -0.61
SHMT2-224ENST00000556737 PPEF2O14830 753 aa11.24□□□□□ -0.61
SHMT2-224ENST00000556737 TBC1D4O60343 1298 aa11.24□□□□□ -0.61
SHMT2-224ENST00000556737 PDIA4P13667 645 aaKnown RBP11.24□□□□□ -0.61
SHMT2-224ENST00000556737 ADSSP30520 456 aa11.24□□□□□ -0.61
SHMT2-224ENST00000556737 RPL9P32969 192 aaKnown RBP11.24□□□□□ -0.61
SHMT2-224ENST00000556737 AARSP49588 968 aaKnown RBP eCLIP11.24□□□□□ -0.61
SHMT2-224ENST00000556737 GUCY2FP51841 1108 aa11.24□□□□□ -0.61
SHMT2-224ENST00000556737 DNM1Q05193 864 aaKnown RBP11.24□□□□□ -0.61
SHMT2-224ENST00000556737 RAB33AQ14088 237 aa11.24□□□□□ -0.61
SHMT2-224ENST00000556737 MRPL58Q14197 206 aaKnown RBP11.24□□□□□ -0.61
SHMT2-224ENST00000556737 KYAT1Q16773 422 aa11.24□□□□□ -0.61
SHMT2-224ENST00000556737 VARS2Q5ST30 1063 aaKnown RBP11.24□□□□□ -0.61
SHMT2-224ENST00000556737 L1TD1Q5T7N2 865 aaKnown RBP11.24□□□□□ -0.61
SHMT2-224ENST00000556737 CRELD2Q6UXH1 353 aaPredicted RBP11.24□□□□□ -0.61
SHMT2-224ENST00000556737 CYP26C1Q6V0L0 522 aa11.24□□□□□ -0.61
SHMT2-224ENST00000556737 HFE2Q6ZVN8 426 aa11.24□□□□□ -0.61
SHMT2-224ENST00000556737 ANKS3Q6ZW76 656 aa11.24□□□□□ -0.61
SHMT2-224ENST00000556737 KCNG4Q8TDN1 519 aa11.24□□□□□ -0.61
SHMT2-224ENST00000556737 SMG7Q92540 1137 aaKnown RBP11.24□□□□□ -0.61
SHMT2-224ENST00000556737 KIF12Q96FN5 646 aa11.24□□□□□ -0.61
SHMT2-224ENST00000556737 ASIC4Q96FT7 647 aa11.24□□□□□ -0.61
SHMT2-224ENST00000556737 SUSD3Q96L08 255 aa11.24□□□□□ -0.61
SHMT2-224ENST00000556737 MSTO1Q9BUK6 570 aa11.24□□□□□ -0.61
SHMT2-224ENST00000556737 TNMDQ9H2S6 317 aa11.24□□□□□ -0.61
SHMT2-224ENST00000556737 SMOC2Q9H3U7 446 aa11.24□□□□□ -0.61
SHMT2-224ENST00000556737 MRPL44Q9H9J2 332 aaKnown RBP11.24□□□□□ -0.61
SHMT2-224ENST00000556737 WDR6Q9NNW5 1121 aaKnown RBP11.24□□□□□ -0.61
SHMT2-224ENST00000556737 TBC1D7Q9P0N9 293 aa11.24□□□□□ -0.61
SHMT2-224ENST00000556737 DPP7Q9UHL4 492 aa11.24□□□□□ -0.61
SHMT2-224ENST00000556737 ZDHHC9Q9Y397 364 aa11.24□□□□□ -0.61
SHMT2-224ENST00000556737 CDY1Q9Y6F8 540 aa11.24□□□□□ -0.61
SHMT2-224ENST00000556737 NOTCH4Q99466 2003 aa11.23□□□□□ -0.61
SHMT2-224ENST00000556737 SYN3O14994 580 aa11.23□□□□□ -0.61
SHMT2-224ENST00000556737 TRAPPC3O43617 180 aa11.23□□□□□ -0.61
SHMT2-224ENST00000556737 ASGR2P07307 311 aa11.23□□□□□ -0.61
SHMT2-224ENST00000556737 C8AP07357 584 aa11.23□□□□□ -0.61
SHMT2-224ENST00000556737 NFICP08651 508 aa11.23□□□□□ -0.61
SHMT2-224ENST00000556737 CYP3A5P20815 502 aa11.23□□□□□ -0.61
SHMT2-224ENST00000556737 HOXA9P31269 272 aa11.23□□□□□ -0.61
SHMT2-224ENST00000556737 OR1D2P34982 312 aa11.23□□□□□ -0.61
SHMT2-224ENST00000556737 WNT7BP56706 349 aa11.23□□□□□ -0.61
SHMT2-224ENST00000556737 ROR1Q01973 937 aa11.23□□□□□ -0.61
SHMT2-224ENST00000556737 JADE1Q6IE81 842 aa11.23□□□□□ -0.61
SHMT2-224ENST00000556737 SLC8B1Q6J4K2 584 aa11.23□□□□□ -0.61
SHMT2-224ENST00000556737 ELMSAN1Q6PJG2 1045 aa11.23□□□□□ -0.61
SHMT2-224ENST00000556737 TRIM67Q6ZTA4 783 aa11.23□□□□□ -0.61
SHMT2-224ENST00000556737 GLIS3Q8NEA6 775 aa11.23□□□□□ -0.61
SHMT2-224ENST00000556737 STAMQ92783 540 aa11.23□□□□□ -0.61
SHMT2-224ENST00000556737 DHX58Q96C10 678 aa11.23□□□□□ -0.61
SHMT2-224ENST00000556737 CHAMP1Q96JM3 812 aa11.23□□□□□ -0.61
SHMT2-224ENST00000556737 PRKD2Q9BZL6 878 aa11.23□□□□□ -0.61
SHMT2-224ENST00000556737 TRIM9Q9C026 710 aa11.23□□□□□ -0.61
SHMT2-224ENST00000556737 CUEDC2Q9H467 287 aa11.23□□□□□ -0.61
SHMT2-224ENST00000556737 RPF1Q9H9Y2 349 aaKnown RBP11.23□□□□□ -0.61
SHMT2-224ENST00000556737 PANK4Q9NVE7 773 aa11.23□□□□□ -0.61
SHMT2-224ENST00000556737 AGO2Q9UKV8 859 aaKnown RBP11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms