RNA–Protein interactions for RNA: ENST00000556288.5

ATXN3-238, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 901 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-238ENST00000556288 PDE4DIPQ5VU43 2346 aa5.34□□□□□ -1.56
ATXN3-238ENST00000556288 PFASO15067 1338 aa5.33□□□□□ -1.56
ATXN3-238ENST00000556288 ABCB11O95342 1321 aa5.33□□□□□ -1.56
ATXN3-238ENST00000556288 ZNF236Q9UL36 1845 aa5.33□□□□□ -1.56
ATXN3-238ENST00000556288 ASB14A6NK59 587 aa5.33□□□□□ -1.56
ATXN3-238ENST00000556288 FADS2P1A8MWK0 482 aa5.33□□□□□ -1.56
ATXN3-238ENST00000556288 NFIBO00712 420 aa5.33□□□□□ -1.56
ATXN3-238ENST00000556288 CPLX1O14810 134 aa5.33□□□□□ -1.56
ATXN3-238ENST00000556288 ATP2A1O14983 1001 aa5.33□□□□□ -1.56
ATXN3-238ENST00000556288 ZBTB5O15062 677 aa5.33□□□□□ -1.56
ATXN3-238ENST00000556288 FGF10O15520 208 aaPredicted RBP5.33□□□□□ -1.56
ATXN3-238ENST00000556288 TBX1O43435 398 aa5.33□□□□□ -1.56
ATXN3-238ENST00000556288 PSPNO60542 156 aa5.33□□□□□ -1.56
ATXN3-238ENST00000556288 DTNBO60941 627 aa5.33□□□□□ -1.56
ATXN3-238ENST00000556288 PLEKHA8P1O95397 391 aa5.33□□□□□ -1.56
ATXN3-238ENST00000556288 C8AP07357 584 aa5.33□□□□□ -1.56
ATXN3-238ENST00000556288 SNHG28P0DPA3 235 aa5.33□□□□□ -1.56
ATXN3-238ENST00000556288 LIFRP42702 1097 aa5.33□□□□□ -1.56
ATXN3-238ENST00000556288 NOVP48745 357 aa5.33□□□□□ -1.56
ATXN3-238ENST00000556288 METAP2P50579 478 aaKnown RBP eCLIP5.33□□□□□ -1.56
ATXN3-238ENST00000556288 NEK4P51957 841 aa5.33□□□□□ -1.56
ATXN3-238ENST00000556288 TROAPQ12815 778 aa5.33□□□□□ -1.56
ATXN3-238ENST00000556288 TRAF1Q13077 416 aa5.33□□□□□ -1.56
ATXN3-238ENST00000556288 ACVR2BQ13705 512 aa5.33□□□□□ -1.56
ATXN3-238ENST00000556288 TIGD5Q53EQ6 642 aa5.33□□□□□ -1.56
ATXN3-238ENST00000556288 HLA-DQA1Q5Y7H0 255 aa5.33□□□□□ -1.56
ATXN3-238ENST00000556288 EEF1DP3Q658K8 133 aa5.33□□□□□ -1.56
ATXN3-238ENST00000556288 OLFML2BQ68BL8 750 aa5.33□□□□□ -1.56
ATXN3-238ENST00000556288 SEPT14Q6ZU15 432 aa5.33□□□□□ -1.56
ATXN3-238ENST00000556288 ARMCX2Q7L311 632 aa5.33□□□□□ -1.56
ATXN3-238ENST00000556288 HEATR3Q7Z4Q2 680 aa5.33□□□□□ -1.56
ATXN3-238ENST00000556288 ZNF227Q86WZ6 799 aa5.33□□□□□ -1.56
ATXN3-238ENST00000556288 SRBD1Q8N5C6 995 aaKnown RBP5.33□□□□□ -1.56
ATXN3-238ENST00000556288 ARRDC4Q8NCT1 418 aa5.33□□□□□ -1.56
ATXN3-238ENST00000556288 TMEM52Q8NDY8 209 aa5.33□□□□□ -1.56
ATXN3-238ENST00000556288 TRPV1Q8NER1 839 aa5.33□□□□□ -1.56
ATXN3-238ENST00000556288 ST13P5Q8NFI4 369 aaPredicted RBP5.33□□□□□ -1.56
ATXN3-238ENST00000556288 SMARCC2Q8TAQ2 1214 aa5.33□□□□□ -1.56
ATXN3-238ENST00000556288 BTN2A2Q8WVV5 523 aa5.33□□□□□ -1.56
ATXN3-238ENST00000556288 UBXN4Q92575 508 aa5.33□□□□□ -1.56
ATXN3-238ENST00000556288 PAWRQ96IZ0 340 aaKnown RBP5.33□□□□□ -1.56
ATXN3-238ENST00000556288 PTCHD1Q96NR3 888 aa5.33□□□□□ -1.56
ATXN3-238ENST00000556288 TAAR1Q96RJ0 339 aa5.33□□□□□ -1.56
ATXN3-238ENST00000556288 LZTS2Q9BRK4 669 aa5.33□□□□□ -1.56
ATXN3-238ENST00000556288 SENP6Q9GZR1 1112 aaPredicted RBP5.33□□□□□ -1.56
ATXN3-238ENST00000556288 CCDC113Q9H0I3 377 aa5.33□□□□□ -1.56
ATXN3-238ENST00000556288 AP5M1Q9H0R1 490 aa5.33□□□□□ -1.56
ATXN3-238ENST00000556288 UPF2Q9HAU5 1272 aaKnown RBP5.33□□□□□ -1.56
ATXN3-238ENST00000556288 CYP39A1Q9NYL5 469 aa5.33□□□□□ -1.56
ATXN3-238ENST00000556288 GPR160Q9UJ42 338 aa5.33□□□□□ -1.56
ATXN3-238ENST00000556288 PNMA2Q9UL42 364 aa5.33□□□□□ -1.56
ATXN3-238ENST00000556288 FAM184BQ9ULE4 1060 aa5.33□□□□□ -1.56
ATXN3-238ENST00000556288 CCDC196A0A1B0GTZ2 297 aa5.32□□□□□ -1.56
ATXN3-238ENST00000556288 A0A1W2PQ27 194 aa5.32□□□□□ -1.56
ATXN3-238ENST00000556288 A0A1W2PQ45 241 aaPredicted RBP5.32□□□□□ -1.56
ATXN3-238ENST00000556288 A0A1W2PQ64 194 aa5.32□□□□□ -1.56
ATXN3-238ENST00000556288 A0A1W2PQC6 194 aa5.32□□□□□ -1.56
ATXN3-238ENST00000556288 A0A1W2PQD8 194 aa5.32□□□□□ -1.56
ATXN3-238ENST00000556288 A0A1W2PQU0 124 aa5.32□□□□□ -1.56
ATXN3-238ENST00000556288 A0A1W2PQY0 241 aa5.32□□□□□ -1.56
ATXN3-238ENST00000556288 KBTBD13C9JR72 458 aa5.32□□□□□ -1.56
ATXN3-238ENST00000556288 GCOM1H8Y6P7 765 aaPredicted RBP5.32□□□□□ -1.56
ATXN3-238ENST00000556288 PDPK1O15530 556 aa5.32□□□□□ -1.56
ATXN3-238ENST00000556288 FARP2O94887 1054 aaPredicted RBP5.32□□□□□ -1.56
ATXN3-238ENST00000556288 SNAI1O95863 264 aaPredicted RBP5.32□□□□□ -1.56
ATXN3-238ENST00000556288 PGK1P00558 417 aa5.32□□□□□ -1.56
ATXN3-238ENST00000556288 GLI1P08151 1106 aa5.32□□□□□ -1.56
ATXN3-238ENST00000556288 HOXC6P09630 235 aa5.32□□□□□ -1.56
ATXN3-238ENST00000556288 C6orf222P0C671 652 aaPredicted RBP5.32□□□□□ -1.56
ATXN3-238ENST00000556288 POLR2MP0CAP2 368 aa5.32□□□□□ -1.56
ATXN3-238ENST00000556288 RARBP10826 455 aa5.32□□□□□ -1.56
ATXN3-238ENST00000556288 ALDH5A1P51649 535 aaPredicted RBP5.32□□□□□ -1.56
ATXN3-238ENST00000556288 NAPAP54920 295 aa5.32□□□□□ -1.56
ATXN3-238ENST00000556288 RPS6P62753 249 aaKnown RBP5.32□□□□□ -1.56
ATXN3-238ENST00000556288 TNFAIP2Q03169 654 aa5.32□□□□□ -1.56
ATXN3-238ENST00000556288 SSRP1Q08945 709 aaKnown RBP5.32□□□□□ -1.56
ATXN3-238ENST00000556288 SCRN1Q12765 414 aa5.32□□□□□ -1.56
ATXN3-238ENST00000556288 CCDC144BQ3MJ40 725 aa5.32□□□□□ -1.56
ATXN3-238ENST00000556288 APOA5Q6Q788 366 aa5.32□□□□□ -1.56
ATXN3-238ENST00000556288 CYP2R1Q6VVX0 501 aa5.32□□□□□ -1.56
ATXN3-238ENST00000556288 SLC30A10Q6XR72 485 aa5.32□□□□□ -1.56
ATXN3-238ENST00000556288 NECAB2Q7Z6G3 386 aa5.32□□□□□ -1.56
ATXN3-238ENST00000556288 KSR1Q8IVT5 923 aa5.32□□□□□ -1.56
ATXN3-238ENST00000556288 CLEC4DQ8WXI8 215 aa5.32□□□□□ -1.56
ATXN3-238ENST00000556288 RMDN3Q96TC7 470 aa5.32□□□□□ -1.56
ATXN3-238ENST00000556288 SLC26A6Q9BXS9 759 aa5.32□□□□□ -1.56
ATXN3-238ENST00000556288 RNF32Q9H0A6 362 aa5.32□□□□□ -1.56
ATXN3-238ENST00000556288 SLKQ9H2G2 1235 aaPredicted RBP5.32□□□□□ -1.56
ATXN3-238ENST00000556288 ABHD16BQ9H3Z7 469 aa5.32□□□□□ -1.56
ATXN3-238ENST00000556288 RIOX1Q9H6W3 641 aa5.32□□□□□ -1.56
ATXN3-238ENST00000556288 SPC25Q9HBM1 224 aa5.32□□□□□ -1.56
ATXN3-238ENST00000556288 NCOA5Q9HCD5 579 aaKnown RBP5.32□□□□□ -1.56
ATXN3-238ENST00000556288 GPRC5CQ9NQ84 441 aa5.32□□□□□ -1.56
ATXN3-238ENST00000556288 XPNPEP3Q9NQH7 507 aa5.32□□□□□ -1.56
ATXN3-238ENST00000556288 CYP26B1Q9NR63 512 aa5.32□□□□□ -1.56
ATXN3-238ENST00000556288 PDGFCQ9NRA1 345 aa5.32□□□□□ -1.56
ATXN3-238ENST00000556288 RBM28Q9NW13 759 aaKnown RBP5.32□□□□□ -1.56
ATXN3-238ENST00000556288 RTEL1Q9NZ71 1219 aa5.32□□□□□ -1.56
ATXN3-238ENST00000556288 DDX20Q9UHI6 824 aaKnown RBP5.32□□□□□ -1.56
ATXN3-238ENST00000556288 MSRB2Q9Y3D2 182 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms