RNA–Protein interactions for RNA: ENST00000556162.5

SNX6-206, Transcript of sorting nexin 6, humanhuman

TSL 2

Gene SNX6, Length 1,855 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-206ENST00000556162 IGSF21Q96ID5 467 aa15.32■□□□□ 0.04
SNX6-206ENST00000556162 PAAF1Q9BRP4 392 aa15.32■□□□□ 0.04
SNX6-206ENST00000556162 SRRTQ9BXP5 876 aaKnown RBP15.32■□□□□ 0.04
SNX6-206ENST00000556162 CACNG4Q9UBN1 327 aa15.32■□□□□ 0.04
SNX6-206ENST00000556162 SYCE3A1L190 88 aa15.31■□□□□ 0.04
SNX6-206ENST00000556162 H3BNC9 293 aa15.31■□□□□ 0.04
SNX6-206ENST00000556162 SLC16A3O15427 465 aaKnown RBP15.31■□□□□ 0.04
SNX6-206ENST00000556162 TMEM191BP0C7N4 346 aa15.31■□□□□ 0.04
SNX6-206ENST00000556162 PLCB3Q01970 1234 aa15.31■□□□□ 0.04
SNX6-206ENST00000556162 GPM6BQ13491 265 aa15.31■□□□□ 0.04
SNX6-206ENST00000556162 UPP1Q16831 310 aa15.31■□□□□ 0.04
SNX6-206ENST00000556162 TMC2Q8TDI7 906 aa15.31■□□□□ 0.04
SNX6-206ENST00000556162 ANKRD36BP1Q96IX9 119 aa15.31■□□□□ 0.04
SNX6-206ENST00000556162 POP1Q99575 1024 aaKnown RBP15.31■□□□□ 0.04
SNX6-206ENST00000556162 CGRRF1Q99675 332 aa15.31■□□□□ 0.04
SNX6-206ENST00000556162 INTS13Q9NVM9 706 aa15.31■□□□□ 0.04
SNX6-206ENST00000556162 DPP3Q9NY33 737 aa15.31■□□□□ 0.04
SNX6-206ENST00000556162 PUF60Q9UHX1 559 aaKnown RBP15.31■□□□□ 0.04
SNX6-206ENST00000556162 TDRD15B5MCY1 1934 aaKnown RBP15.31■□□□□ 0.04
SNX6-206ENST00000556162 TRIP11Q15643 1979 aa15.31■□□□□ 0.04
SNX6-206ENST00000556162 PODXLO00592 558 aa15.31■□□□□ 0.04
SNX6-206ENST00000556162 TADA2AO75478 443 aa15.31■□□□□ 0.04
SNX6-206ENST00000556162 B3GAT3O94766 335 aa15.31■□□□□ 0.04
SNX6-206ENST00000556162 TNNC2P02585 160 aa15.31■□□□□ 0.04
SNX6-206ENST00000556162 LRPAP1P30533 357 aa15.31■□□□□ 0.04
SNX6-206ENST00000556162 VAMP7P51809 220 aa15.31■□□□□ 0.04
SNX6-206ENST00000556162 ZSCAN23Q3MJ62 389 aa15.31■□□□□ 0.04
SNX6-206ENST00000556162 LMBRD2Q68DH5 695 aaPredicted RBP15.31■□□□□ 0.04
SNX6-206ENST00000556162 FAM161BQ96MY7 647 aa15.31■□□□□ 0.04
SNX6-206ENST00000556162 NAT10Q9H0A0 1025 aaKnown RBP15.31■□□□□ 0.04
SNX6-206ENST00000556162 ALG13Q9NP73 1137 aaKnown RBP15.31■□□□□ 0.04
SNX6-206ENST00000556162 GNA14O95837 355 aa15.3■□□□□ 0.04
SNX6-206ENST00000556162 ITGB1P05556 798 aa15.3■□□□□ 0.04
SNX6-206ENST00000556162 GUCY2FP51841 1108 aa15.3■□□□□ 0.04
SNX6-206ENST00000556162 AP3M2P53677 418 aa15.3■□□□□ 0.04
SNX6-206ENST00000556162 ENPEPQ07075 957 aa15.3■□□□□ 0.04
SNX6-206ENST00000556162 BFSP1Q12934 665 aa15.3■□□□□ 0.04
SNX6-206ENST00000556162 GRIN2CQ14957 1233 aa15.3■□□□□ 0.04
SNX6-206ENST00000556162 TMEM173Q86WV6 379 aaPredicted RBP15.3■□□□□ 0.04
SNX6-206ENST00000556162 PLEKHO2Q8TD55 490 aa15.3■□□□□ 0.04
SNX6-206ENST00000556162 MED15Q96RN5 788 aa15.3■□□□□ 0.04
SNX6-206ENST00000556162 MTMR12Q9C0I1 747 aa15.3■□□□□ 0.04
SNX6-206ENST00000556162 DNAJC25Q9H1X3 360 aa15.3■□□□□ 0.04
SNX6-206ENST00000556162 METTL14Q9HCE5 456 aaKnown RBP15.3■□□□□ 0.04
SNX6-206ENST00000556162 ARMCX3Q9UH62 379 aaPredicted RBP15.3■□□□□ 0.04
SNX6-206ENST00000556162 ADAM28Q9UKQ2 775 aa15.3■□□□□ 0.04
SNX6-206ENST00000556162 R3HCC1Q9Y3T6 440 aaKnown RBP15.3■□□□□ 0.04
SNX6-206ENST00000556162 EPOPA6NHQ4 379 aa15.29■□□□□ 0.04
SNX6-206ENST00000556162 LRRIQ3A6PVS8 624 aaPredicted RBP15.29■□□□□ 0.04
SNX6-206ENST00000556162 RFXAPO00287 272 aa15.29■□□□□ 0.04
SNX6-206ENST00000556162 IKBKBO14920 756 aa15.29■□□□□ 0.04
SNX6-206ENST00000556162 CLDN10P78369 228 aa15.29■□□□□ 0.04
SNX6-206ENST00000556162 UBE3AQ05086 875 aa15.29■□□□□ 0.04
SNX6-206ENST00000556162 CCDC40Q4G0X9 1142 aa15.29■□□□□ 0.04
SNX6-206ENST00000556162 C9orf57Q5W0N0 161 aa15.29■□□□□ 0.04
SNX6-206ENST00000556162 FRMD5Q7Z6J6 570 aa15.29■□□□□ 0.04
SNX6-206ENST00000556162 OR5B17Q8NGF7 314 aa15.29■□□□□ 0.04
SNX6-206ENST00000556162 SPPL3Q8TCT6 385 aa15.29■□□□□ 0.04
SNX6-206ENST00000556162 BORCS6Q96GS4 357 aa15.29■□□□□ 0.04
SNX6-206ENST00000556162 GZF1Q9H116 711 aaPredicted RBP15.29■□□□□ 0.04
SNX6-206ENST00000556162 PRDM12Q9H4Q4 367 aa15.29■□□□□ 0.04
SNX6-206ENST00000556162 MARCH5Q9NX47 278 aa15.29■□□□□ 0.04
SNX6-206ENST00000556162 STK39Q9UEW8 545 aa15.29■□□□□ 0.04
SNX6-206ENST00000556162 ITGA11Q9UKX5 1188 aa15.29■□□□□ 0.04
SNX6-206ENST00000556162 NUB1Q9Y5A7 615 aa15.29■□□□□ 0.04
SNX6-206ENST00000556162 PTPRJQ12913 1337 aa15.29■□□□□ 0.04
SNX6-206ENST00000556162 RALGAPA2Q2PPJ7 1873 aa15.29■□□□□ 0.04
SNX6-206ENST00000556162 F8W810 466 aa15.29■□□□□ 0.04
SNX6-206ENST00000556162 TMEM189-UBE2V1I3L0A0 370 aa15.29■□□□□ 0.04
SNX6-206ENST00000556162 GRM6O15303 877 aa15.29■□□□□ 0.04
SNX6-206ENST00000556162 KIF4AO95239 1232 aa15.29■□□□□ 0.04
SNX6-206ENST00000556162 DLG4P78352 724 aa15.29■□□□□ 0.04
SNX6-206ENST00000556162 ANO6Q4KMQ2 910 aa15.29■□□□□ 0.04
SNX6-206ENST00000556162 C11orf57Q6ZUT1 292 aaPredicted RBP15.29■□□□□ 0.04
SNX6-206ENST00000556162 TRAPPC11Q7Z392 1133 aa15.29■□□□□ 0.04
SNX6-206ENST00000556162 DDX53Q86TM3 631 aaKnown RBP15.29■□□□□ 0.04
SNX6-206ENST00000556162 DEFB123Q8N688 67 aa15.29■□□□□ 0.04
SNX6-206ENST00000556162 C1orf127Q8N9H9 656 aa15.29■□□□□ 0.04
SNX6-206ENST00000556162 ENOX1Q8TC92 643 aaKnown RBP15.29■□□□□ 0.04
SNX6-206ENST00000556162 HASPINQ8TF76 798 aa15.29■□□□□ 0.04
SNX6-206ENST00000556162 GDPD5Q8WTR4 605 aa15.29■□□□□ 0.04
SNX6-206ENST00000556162 BCL7CQ8WUZ0 217 aaPredicted RBP15.29■□□□□ 0.04
SNX6-206ENST00000556162 POF1BQ8WVV4 589 aa15.29■□□□□ 0.04
SNX6-206ENST00000556162 LZTS1Q9Y250 596 aa15.29■□□□□ 0.04
SNX6-206ENST00000556162 ANO9A1A5B4 782 aa15.28■□□□□ 0.04
SNX6-206ENST00000556162 PIRO00625 290 aa15.28■□□□□ 0.04
SNX6-206ENST00000556162 TRAPPC3O43617 180 aa15.28■□□□□ 0.04
SNX6-206ENST00000556162 ITGB3P05106 788 aa15.28■□□□□ 0.04
SNX6-206ENST00000556162 KRT19P08727 400 aa15.28■□□□□ 0.04
SNX6-206ENST00000556162 RBP5P82980 135 aa15.28■□□□□ 0.04
SNX6-206ENST00000556162 Q7L0L9 218 aa15.28■□□□□ 0.04
SNX6-206ENST00000556162 CREBRFQ8IUR6 639 aa15.28■□□□□ 0.04
SNX6-206ENST00000556162 TMEM130Q8N3G9 435 aa15.28■□□□□ 0.04
SNX6-206ENST00000556162 ZNF516Q92618 1163 aa15.28■□□□□ 0.04
SNX6-206ENST00000556162 FAM84AQ96KN4 292 aa15.28■□□□□ 0.04
SNX6-206ENST00000556162 AGAP1Q9UPQ3 857 aa15.28■□□□□ 0.04
SNX6-206ENST00000556162 NLRC5Q86WI3 1866 aa15.27■□□□□ 0.04
SNX6-206ENST00000556162 STX10O60499 249 aa15.27■□□□□ 0.04
SNX6-206ENST00000556162 PHACTR2O75167 634 aa15.27■□□□□ 0.04
SNX6-206ENST00000556162 TRIM49P0CI25 452 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms