RNA–Protein interactions for RNA: ENST00000555535.1

SRP54-207, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-207ENST00000555535 ALOX15P16050 662 aaPredicted RBP4.58□□□□□ -1.68
SRP54-207ENST00000555535 SDSP20132 328 aa4.58□□□□□ -1.68
SRP54-207ENST00000555535 SREBF1P36956 1147 aa4.58□□□□□ -1.68
SRP54-207ENST00000555535 NR4A2P43354 598 aa4.58□□□□□ -1.68
SRP54-207ENST00000555535 MMP13P45452 471 aa4.58□□□□□ -1.68
SRP54-207ENST00000555535 SQSTM1Q13501 440 aa4.58□□□□□ -1.68
SRP54-207ENST00000555535 KRTAP27-1Q3LI81 207 aa4.58□□□□□ -1.68
SRP54-207ENST00000555535 ZNF260Q3ZCT1 412 aa4.58□□□□□ -1.68
SRP54-207ENST00000555535 KIAA1161Q6NSJ0 714 aa4.58□□□□□ -1.68
SRP54-207ENST00000555535 ZNF782Q6ZMW2 699 aaPredicted RBP4.58□□□□□ -1.68
SRP54-207ENST00000555535 YTHDF3Q7Z739 585 aaKnown RBP4.58□□□□□ -1.68
SRP54-207ENST00000555535 MRI1Q9BV20 369 aa4.58□□□□□ -1.68
SRP54-207ENST00000555535 KANSL2Q9H9L4 492 aa4.58□□□□□ -1.68
SRP54-207ENST00000555535 TUBA8Q9NY65 449 aaPredicted RBP4.58□□□□□ -1.68
SRP54-207ENST00000555535 PCDHB1Q9Y5F3 818 aa4.58□□□□□ -1.68
SRP54-207ENST00000555535 IL2RBP14784 551 aa4.57□□□□□ -1.68
SRP54-207ENST00000555535 ATP2A2P16615 1042 aaKnown RBP4.57□□□□□ -1.68
SRP54-207ENST00000555535 ATP5JP18859 108 aa4.57□□□□□ -1.68
SRP54-207ENST00000555535 PHC1P78364 1004 aa4.57□□□□□ -1.68
SRP54-207ENST00000555535 MST1LQ2TV78 715 aa4.57□□□□□ -1.68
SRP54-207ENST00000555535 PITRM1Q5JRX3 1037 aa4.57□□□□□ -1.68
SRP54-207ENST00000555535 CDCA2Q69YH5 1023 aaPredicted RBP4.57□□□□□ -1.68
SRP54-207ENST00000555535 TFAP2BQ92481 460 aa4.57□□□□□ -1.68
SRP54-207ENST00000555535 INTS13Q9NVM9 706 aa4.57□□□□□ -1.68
SRP54-207ENST00000555535 ADAM21Q9UKJ8 722 aa4.57□□□□□ -1.68
SRP54-207ENST00000555535 CDY2AQ9Y6F7 541 aa4.57□□□□□ -1.68
SRP54-207ENST00000555535 ATRNL1Q5VV63 1379 aa4.56□□□□□ -1.68
SRP54-207ENST00000555535 CCDC187A0A096LP49 1063 aa4.56□□□□□ -1.68
SRP54-207ENST00000555535 PPP1R12AO14974 1030 aaPredicted RBP4.56□□□□□ -1.68
SRP54-207ENST00000555535 JMJD7P0C870 316 aa4.56□□□□□ -1.68
SRP54-207ENST00000555535 KRTAP5-9P26371 169 aa4.56□□□□□ -1.68
SRP54-207ENST00000555535 CFAP100Q494V2 611 aa4.56□□□□□ -1.68
SRP54-207ENST00000555535 FAM180AQ6UWF9 173 aa4.56□□□□□ -1.68
SRP54-207ENST00000555535 SLC41A1Q8IVJ1 513 aa4.56□□□□□ -1.68
SRP54-207ENST00000555535 TRMT2AQ8IZ69 625 aaKnown RBP4.56□□□□□ -1.68
SRP54-207ENST00000555535 ZNF610Q8N9Z0 462 aa4.56□□□□□ -1.68
SRP54-207ENST00000555535 OR7D4Q8NG98 312 aa4.56□□□□□ -1.68
SRP54-207ENST00000555535 NUP133Q8WUM0 1156 aa4.56□□□□□ -1.68
SRP54-207ENST00000555535 BCO1Q9HAY6 547 aa4.56□□□□□ -1.68
SRP54-207ENST00000555535 H2AFY2Q9P0M6 372 aaPredicted RBP4.56□□□□□ -1.68
SRP54-207ENST00000555535 TMPRSS11EQ9UL52 423 aa4.56□□□□□ -1.68
SRP54-207ENST00000555535 PPP6CO00743 305 aa4.55□□□□□ -1.68
SRP54-207ENST00000555535 TOP3BO95985 862 aaKnown RBP4.55□□□□□ -1.68
SRP54-207ENST00000555535 ALAS1P13196 640 aa4.55□□□□□ -1.68
SRP54-207ENST00000555535 LSP1P33241 339 aa4.55□□□□□ -1.68
SRP54-207ENST00000555535 SOGA3Q5TF21 947 aa4.55□□□□□ -1.68
SRP54-207ENST00000555535 PXDC1Q5TGL8 231 aa4.55□□□□□ -1.68
SRP54-207ENST00000555535 KRTAP5-4Q6L8H1 288 aa4.55□□□□□ -1.68
SRP54-207ENST00000555535 CDK11AQ9UQ88 783 aaPredicted RBP4.55□□□□□ -1.68
SRP54-207ENST00000555535 PPP2R3BQ9Y5P8 575 aa4.55□□□□□ -1.68
SRP54-207ENST00000555535 A0A1W2PS29 197 aa4.54□□□□□ -1.68
SRP54-207ENST00000555535 CCDC78A2IDD5 438 aa4.54□□□□□ -1.68
SRP54-207ENST00000555535 LINC00473A8K010 186 aa4.54□□□□□ -1.68
SRP54-207ENST00000555535 ADCY6O43306 1168 aa4.54□□□□□ -1.68
SRP54-207ENST00000555535 KRT86O43790 486 aa4.54□□□□□ -1.68
SRP54-207ENST00000555535 ELFN1P0C7U0 828 aa4.54□□□□□ -1.68
SRP54-207ENST00000555535 MT3P25713 68 aa4.54□□□□□ -1.68
SRP54-207ENST00000555535 SCNN1BP51168 640 aa4.54□□□□□ -1.68
SRP54-207ENST00000555535 KRT81Q14533 505 aa4.54□□□□□ -1.68
SRP54-207ENST00000555535 AFMIDQ63HM1 303 aa4.54□□□□□ -1.68
SRP54-207ENST00000555535 OTUD7BQ6GQQ9 843 aa4.54□□□□□ -1.68
SRP54-207ENST00000555535 SLC18B1Q6NT16 456 aa4.54□□□□□ -1.68
SRP54-207ENST00000555535 FRMD7Q6ZUT3 714 aa4.54□□□□□ -1.68
SRP54-207ENST00000555535 RASAL3Q86YV0 1011 aa4.54□□□□□ -1.68
SRP54-207ENST00000555535 LYSMD2Q8IV50 215 aa4.54□□□□□ -1.68
SRP54-207ENST00000555535 DNAJC2Q99543 621 aaKnown RBP4.54□□□□□ -1.68
SRP54-207ENST00000555535 SIK3Q9Y2K2 1263 aa4.54□□□□□ -1.68
SRP54-207ENST00000555535 NEU2Q9Y3R4 380 aa4.54□□□□□ -1.68
SRP54-207ENST00000555535 ADM5C9JUS6 153 aa4.53□□□□□ -1.68
SRP54-207ENST00000555535 TEX33O43247 280 aa4.53□□□□□ -1.68
SRP54-207ENST00000555535 F2P00734 622 aa4.53□□□□□ -1.68
SRP54-207ENST00000555535 RAP2AP10114 183 aa4.53□□□□□ -1.68
SRP54-207ENST00000555535 ZNF134P52741 427 aa4.53□□□□□ -1.68
SRP54-207ENST00000555535 MANFP55145 182 aaKnown RBP4.53□□□□□ -1.68
SRP54-207ENST00000555535 TMEM119Q4V9L6 283 aa4.53□□□□□ -1.68
SRP54-207ENST00000555535 REPS2Q8NFH8 660 aa4.53□□□□□ -1.68
SRP54-207ENST00000555535 MARS2Q96GW9 593 aaKnown RBP4.53□□□□□ -1.68
SRP54-207ENST00000555535 MARK4Q96L34 752 aa4.53□□□□□ -1.68
SRP54-207ENST00000555535 OSBPL2Q9H1P3 480 aa4.53□□□□□ -1.68
SRP54-207ENST00000555535 FAM83GA6ND36 823 aa4.52□□□□□ -1.69
SRP54-207ENST00000555535 TARM1B6A8C7 271 aa4.52□□□□□ -1.69
SRP54-207ENST00000555535 TTLL1O95922 423 aa4.52□□□□□ -1.69
SRP54-207ENST00000555535 TUBB4AP04350 444 aa4.52□□□□□ -1.69
SRP54-207ENST00000555535 CANXP27824 592 aaKnown RBP4.52□□□□□ -1.69
SRP54-207ENST00000555535 MCAMP43121 646 aa4.52□□□□□ -1.69
SRP54-207ENST00000555535 OCRLQ01968 901 aa4.52□□□□□ -1.69
SRP54-207ENST00000555535 BMS1Q14692 1282 aaKnown RBP4.52□□□□□ -1.69
SRP54-207ENST00000555535 TXNRD1Q16881 649 aa4.52□□□□□ -1.69
SRP54-207ENST00000555535 ZBTB8BQ8NAP8 495 aaPredicted RBP4.52□□□□□ -1.69
SRP54-207ENST00000555535 TOR1AIP2Q8NFQ8 470 aa4.52□□□□□ -1.69
SRP54-207ENST00000555535 NSMCE1Q8WV22 266 aa4.52□□□□□ -1.69
SRP54-207ENST00000555535 VPS16Q9H269 839 aa4.52□□□□□ -1.69
SRP54-207ENST00000555535 PRAMEF33A0A0G2JMD5 474 aa4.51□□□□□ -1.69
SRP54-207ENST00000555535 LCHNA4D1U4 455 aa4.51□□□□□ -1.69
SRP54-207ENST00000555535 GSG1L2A8MUP6 293 aa4.51□□□□□ -1.69
SRP54-207ENST00000555535 TGM5O43548 720 aa4.51□□□□□ -1.69
SRP54-207ENST00000555535 PRAMEF10O60809 474 aa4.51□□□□□ -1.69
SRP54-207ENST00000555535 URI1O94763 535 aaPredicted RBP4.51□□□□□ -1.69
SRP54-207ENST00000555535 SLC6A2P23975 617 aa4.51□□□□□ -1.69
SRP54-207ENST00000555535 MPGP29372 298 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms