RNA–Protein interactions for RNA: ENST00000555178.5

TDP1-211, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 2,200 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-211ENST00000555178 TRIM21P19474 475 aaKnown RBP11.63□□□□□ -0.55
TDP1-211ENST00000555178 WDR5P61964 334 aaKnown RBP11.63□□□□□ -0.55
TDP1-211ENST00000555178 FPGSQ05932 587 aa11.63□□□□□ -0.55
TDP1-211ENST00000555178 ZBTB6Q15916 424 aa11.63□□□□□ -0.55
TDP1-211ENST00000555178 EPC2Q52LR7 807 aa11.63□□□□□ -0.55
TDP1-211ENST00000555178 XKR4Q5GH76 650 aa11.63□□□□□ -0.55
TDP1-211ENST00000555178 C9orf50Q5SZB4 431 aa11.63□□□□□ -0.55
TDP1-211ENST00000555178 SPOPLQ6IQ16 392 aa11.63□□□□□ -0.55
TDP1-211ENST00000555178 TRIM65Q6PJ69 517 aa11.63□□□□□ -0.55
TDP1-211ENST00000555178 C1orf127Q8N9H9 656 aa11.63□□□□□ -0.55
TDP1-211ENST00000555178 TC2NQ8N9U0 490 aa11.63□□□□□ -0.55
TDP1-211ENST00000555178 LMO3Q8TAP4 145 aa11.63□□□□□ -0.55
TDP1-211ENST00000555178 HTATIP2Q9BUP3 242 aa11.63□□□□□ -0.55
TDP1-211ENST00000555178 INTS2Q9H0H0 1204 aaKnown RBP11.63□□□□□ -0.55
TDP1-211ENST00000555178 E4F1Q66K89 784 aaPredicted RBP11.63□□□□□ -0.55
TDP1-211ENST00000555178 GBP6Q6ZN66 633 aa11.63□□□□□ -0.55
TDP1-211ENST00000555178 ZNF280BQ86YH2 543 aa11.63□□□□□ -0.55
TDP1-211ENST00000555178 KIF12Q96FN5 646 aa11.63□□□□□ -0.55
TDP1-211ENST00000555178 GANQ9H2C0 597 aa11.63□□□□□ -0.55
TDP1-211ENST00000555178 TMEM8AQ9HCN3 771 aa11.63□□□□□ -0.55
TDP1-211ENST00000555178 NLRC4Q9NPP4 1024 aa11.63□□□□□ -0.55
TDP1-211ENST00000555178 CNTN3Q9P232 1028 aa11.63□□□□□ -0.55
TDP1-211ENST00000555178 PRKAG2Q9UGJ0 569 aa11.63□□□□□ -0.55
TDP1-211ENST00000555178 FHOD1Q9Y613 1164 aa11.63□□□□□ -0.55
TDP1-211ENST00000555178 REV3LO60673 3130 aa11.62□□□□□ -0.55
TDP1-211ENST00000555178 MFAP3LO75121 409 aa11.62□□□□□ -0.55
TDP1-211ENST00000555178 DDHD2O94830 711 aa11.62□□□□□ -0.55
TDP1-211ENST00000555178 PNMA6AP0CW24 399 aaPredicted RBP11.62□□□□□ -0.55
TDP1-211ENST00000555178 POLR2FP61218 127 aaKnown RBP11.62□□□□□ -0.55
TDP1-211ENST00000555178 BIRC3Q13489 604 aa11.62□□□□□ -0.55
TDP1-211ENST00000555178 IKBKEQ14164 716 aa11.62□□□□□ -0.55
TDP1-211ENST00000555178 KRT39Q6A163 491 aa11.62□□□□□ -0.55
TDP1-211ENST00000555178 TRAPPC11Q7Z392 1133 aa11.62□□□□□ -0.55
TDP1-211ENST00000555178 ARHGEF19Q8IW93 802 aa11.62□□□□□ -0.55
TDP1-211ENST00000555178 KAT5Q92993 513 aa11.62□□□□□ -0.55
TDP1-211ENST00000555178 PPP1R10Q96QC0 940 aaKnown RBP11.62□□□□□ -0.55
TDP1-211ENST00000555178 FTHL17Q9BXU8 183 aa11.62□□□□□ -0.55
TDP1-211ENST00000555178 RSAD1Q9HA92 442 aa11.62□□□□□ -0.55
TDP1-211ENST00000555178 IMPACTQ9P2X3 320 aa11.62□□□□□ -0.55
TDP1-211ENST00000555178 RFC2P35250 354 aa11.62□□□□□ -0.55
TDP1-211ENST00000555178 PBX3P40426 434 aa11.62□□□□□ -0.55
TDP1-211ENST00000555178 MAGEA10P43363 369 aaPredicted RBP11.62□□□□□ -0.55
TDP1-211ENST00000555178 ZACNQ401N2 412 aa11.62□□□□□ -0.55
TDP1-211ENST00000555178 PAN2Q504Q3 1202 aaKnown RBP11.62□□□□□ -0.55
TDP1-211ENST00000555178 KLHDC7AQ5VTJ3 777 aa11.62□□□□□ -0.55
TDP1-211ENST00000555178 FAM109BQ6ICB4 259 aaPredicted RBP11.62□□□□□ -0.55
TDP1-211ENST00000555178 PPFIBP1Q86W92 1011 aa11.62□□□□□ -0.55
TDP1-211ENST00000555178 WDR49Q8IV35 697 aa11.62□□□□□ -0.55
TDP1-211ENST00000555178 NEK11Q8NG66 645 aa11.62□□□□□ -0.55
TDP1-211ENST00000555178 APBB2Q92870 758 aa11.62□□□□□ -0.55
TDP1-211ENST00000555178 TATDN2Q93075 761 aa11.62□□□□□ -0.55
TDP1-211ENST00000555178 CASD1Q96PB1 797 aa11.62□□□□□ -0.55
TDP1-211ENST00000555178 APOBEC3GQ9HC16 384 aaKnown RBP11.62□□□□□ -0.55
TDP1-211ENST00000555178 DNAJB4Q9UDY4 337 aa11.62□□□□□ -0.55
TDP1-211ENST00000555178 VWA8A3KMH1 1905 aa11.61□□□□□ -0.55
TDP1-211ENST00000555178 GTPBP10A4D1E9 387 aaKnown RBP11.61□□□□□ -0.55
TDP1-211ENST00000555178 HLA-DRAP01903 254 aa11.61□□□□□ -0.55
TDP1-211ENST00000555178 ITGB3P05106 788 aa11.61□□□□□ -0.55
TDP1-211ENST00000555178 MYL6P60660 151 aa11.61□□□□□ -0.55
TDP1-211ENST00000555178 TMEM132DQ14C87 1099 aa11.61□□□□□ -0.55
TDP1-211ENST00000555178 PHLDB3Q6NSJ2 640 aa11.61□□□□□ -0.55
TDP1-211ENST00000555178 RRAGAQ7L523 313 aa11.61□□□□□ -0.55
TDP1-211ENST00000555178 SPRED2Q7Z698 418 aa11.61□□□□□ -0.55
TDP1-211ENST00000555178 C3orf58Q8NDZ4 430 aa11.61□□□□□ -0.55
TDP1-211ENST00000555178 BAP1Q92560 729 aa11.61□□□□□ -0.55
TDP1-211ENST00000555178 TMEM161AQ9NX61 479 aa11.61□□□□□ -0.55
TDP1-211ENST00000555178 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.61□□□□□ -0.55
TDP1-211ENST00000555178 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.61□□□□□ -0.55
TDP1-211ENST00000555178 CASTOR2A6NHX0 329 aa11.6□□□□□ -0.55
TDP1-211ENST00000555178 ZBBXA8MT70 800 aa11.6□□□□□ -0.55
TDP1-211ENST00000555178 GRXCR1A8MXD5 290 aa11.6□□□□□ -0.55
TDP1-211ENST00000555178 GOLGA6L6A8MZA4 724 aa11.6□□□□□ -0.55
TDP1-211ENST00000555178 AKR1B15C9JRZ8 316 aaPredicted RBP11.6□□□□□ -0.55
TDP1-211ENST00000555178 SPTLC1O15269 473 aa11.6□□□□□ -0.55
TDP1-211ENST00000555178 IL18RAPO95256 599 aa11.6□□□□□ -0.55
TDP1-211ENST00000555178 PARNO95453 639 aaKnown RBP11.6□□□□□ -0.55
TDP1-211ENST00000555178 FGBP02675 491 aa11.6□□□□□ -0.55
TDP1-211ENST00000555178 ITGB1P05556 798 aa11.6□□□□□ -0.55
TDP1-211ENST00000555178 UCHL3P15374 230 aa11.6□□□□□ -0.55
TDP1-211ENST00000555178 KCNE1P15382 129 aa11.6□□□□□ -0.55
TDP1-211ENST00000555178 KRT9P35527 623 aa11.6□□□□□ -0.55
TDP1-211ENST00000555178 PIK3CAP42336 1068 aa11.6□□□□□ -0.55
TDP1-211ENST00000555178 RAB27AP51159 221 aa11.6□□□□□ -0.55
TDP1-211ENST00000555178 YARSP54577 528 aaKnown RBP11.6□□□□□ -0.55
TDP1-211ENST00000555178 IQCEQ6IPM2 695 aa11.6□□□□□ -0.55
TDP1-211ENST00000555178 USP37Q86T82 979 aa11.6□□□□□ -0.55
TDP1-211ENST00000555178 LRRC8AQ8IWT6 810 aa11.6□□□□□ -0.55
TDP1-211ENST00000555178 EHBP1Q8NDI1 1231 aa11.6□□□□□ -0.55
TDP1-211ENST00000555178 FBXL13Q8NEE6 735 aa11.6□□□□□ -0.55
TDP1-211ENST00000555178 ARID3AQ99856 593 aa11.6□□□□□ -0.55
TDP1-211ENST00000555178 ASB7Q9H672 318 aa11.6□□□□□ -0.55
TDP1-211ENST00000555178 C1orf112Q9NSG2 853 aa11.6□□□□□ -0.55
TDP1-211ENST00000555178 ABHD10Q9NUJ1 306 aa11.6□□□□□ -0.55
TDP1-211ENST00000555178 RAB20Q9NX57 234 aa11.6□□□□□ -0.55
TDP1-211ENST00000555178 DPP3Q9NY33 737 aa11.6□□□□□ -0.55
TDP1-211ENST00000555178 CAPN11Q9UMQ6 739 aa11.6□□□□□ -0.55
TDP1-211ENST00000555178 GIT1Q9Y2X7 761 aa11.6□□□□□ -0.55
TDP1-211ENST00000555178 NLRC5Q86WI3 1866 aa11.6□□□□□ -0.55
TDP1-211ENST00000555178 LRRC53A6NM62 1247 aa11.6□□□□□ -0.55
TDP1-211ENST00000555178 H0YGN5 161 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms