RNA–Protein interactions for RNA: ENST00000554785.1

PRPF39-208, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 2,121 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-208ENST00000554785 SYT12Q8IV01 421 aa1.97□□□□□ -2.09
PRPF39-208ENST00000554785 TPH2Q8IWU9 490 aa1.97□□□□□ -2.09
PRPF39-208ENST00000554785 TCEAL8Q8IYN2 117 aa1.97□□□□□ -2.09
PRPF39-208ENST00000554785 ULK2Q8IYT8 1036 aa1.97□□□□□ -2.09
PRPF39-208ENST00000554785 MIER2Q8N344 545 aa1.97□□□□□ -2.09
PRPF39-208ENST00000554785 OR5M3Q8NGP4 307 aa1.97□□□□□ -2.09
PRPF39-208ENST00000554785 SLC25A43Q8WUT9 341 aaPredicted RBP1.97□□□□□ -2.09
PRPF39-208ENST00000554785 ST8SIA2Q92186 375 aa1.97□□□□□ -2.09
PRPF39-208ENST00000554785 PAWRQ96IZ0 340 aaKnown RBP1.97□□□□□ -2.09
PRPF39-208ENST00000554785 NUP88Q99567 741 aaPredicted RBP1.97□□□□□ -2.09
PRPF39-208ENST00000554785 TTPALQ9BTX7 342 aa1.97□□□□□ -2.09
PRPF39-208ENST00000554785 TEX101Q9BY14 249 aa1.97□□□□□ -2.09
PRPF39-208ENST00000554785 NRDE2Q9H7Z3 1164 aa1.97□□□□□ -2.09
PRPF39-208ENST00000554785 RGS17Q9UGC6 210 aaPredicted RBP1.97□□□□□ -2.09
PRPF39-208ENST00000554785 TUBD1Q9UJT1 453 aa1.97□□□□□ -2.09
PRPF39-208ENST00000554785 SORCS3Q9UPU3 1222 aa1.97□□□□□ -2.09
PRPF39-208ENST00000554785 POLR1AO95602 1720 aaPredicted RBP1.97□□□□□ -2.09
PRPF39-208ENST00000554785 ABCA8O94911 1581 aa1.97□□□□□ -2.09
PRPF39-208ENST00000554785 SETD1BQ9UPS6 1966 aaKnown RBP1.97□□□□□ -2.09
PRPF39-208ENST00000554785 GPR98Q8WXG9 6306 aa1.97□□□□□ -2.09
PRPF39-208ENST00000554785 DENND4BO75064 1496 aaPredicted RBP1.97□□□□□ -2.09
PRPF39-208ENST00000554785 AKNAQ7Z591 1439 aa1.97□□□□□ -2.09
PRPF39-208ENST00000554785 KIF27Q86VH2 1401 aa1.97□□□□□ -2.09
PRPF39-208ENST00000554785 CLTCQ00610 1675 aaKnown RBP1.97□□□□□ -2.09
PRPF39-208ENST00000554785 ITSN2Q9NZM3 1697 aa1.97□□□□□ -2.09
PRPF39-208ENST00000554785 GOLGA6CA6NDK9 693 aa1.97□□□□□ -2.09
PRPF39-208ENST00000554785 GOLGA6BA6NDN3 693 aa1.97□□□□□ -2.09
PRPF39-208ENST00000554785 MTSS1O43312 755 aa1.97□□□□□ -2.09
PRPF39-208ENST00000554785 LPXNO60711 386 aa1.97□□□□□ -2.09
PRPF39-208ENST00000554785 MFAP3LO75121 409 aa1.97□□□□□ -2.09
PRPF39-208ENST00000554785 TMEM127O75204 238 aa1.97□□□□□ -2.09
PRPF39-208ENST00000554785 GOLGA6DP0CG33 693 aa1.97□□□□□ -2.09
PRPF39-208ENST00000554785 GSPT1P15170 499 aaKnown RBP1.97□□□□□ -2.09
PRPF39-208ENST00000554785 PROZP22891 400 aa1.97□□□□□ -2.09
PRPF39-208ENST00000554785 AKAP5P24588 427 aa1.97□□□□□ -2.09
PRPF39-208ENST00000554785 SLC16A1P53985 500 aa1.97□□□□□ -2.09
PRPF39-208ENST00000554785 FSTL1Q12841 308 aa1.97□□□□□ -2.09
PRPF39-208ENST00000554785 GTF2H3Q13889 308 aa1.97□□□□□ -2.09
PRPF39-208ENST00000554785 MLC1Q15049 377 aa1.97□□□□□ -2.09
PRPF39-208ENST00000554785 UBE3CQ15386 1083 aa1.97□□□□□ -2.09
PRPF39-208ENST00000554785 RRP12Q5JTH9 1297 aaKnown RBP1.97□□□□□ -2.09
PRPF39-208ENST00000554785 NAIF1Q69YI7 327 aaPredicted RBP1.97□□□□□ -2.09
PRPF39-208ENST00000554785 FAM180AQ6UWF9 173 aa1.97□□□□□ -2.09
PRPF39-208ENST00000554785 NOL8Q76FK4 1167 aaKnown RBP1.97□□□□□ -2.09
PRPF39-208ENST00000554785 C14orf80Q86SX3 495 aa1.97□□□□□ -2.09
PRPF39-208ENST00000554785 UNC5BQ8IZJ1 945 aa1.97□□□□□ -2.09
PRPF39-208ENST00000554785 ZNF276Q8N554 614 aa1.97□□□□□ -2.09
PRPF39-208ENST00000554785 GLB1L3Q8NCI6 653 aaPredicted RBP1.97□□□□□ -2.09
PRPF39-208ENST00000554785 OR52N2Q8NGI0 321 aa1.97□□□□□ -2.09
PRPF39-208ENST00000554785 NRG4Q8WWG1 115 aa1.97□□□□□ -2.09
PRPF39-208ENST00000554785 ARL8AQ96BM9 186 aa1.97□□□□□ -2.09
PRPF39-208ENST00000554785 COA7Q96BR5 231 aa1.97□□□□□ -2.09
PRPF39-208ENST00000554785 CCDC136Q96JN2 1154 aa1.97□□□□□ -2.09
PRPF39-208ENST00000554785 C8orf48Q96LL4 319 aa1.97□□□□□ -2.09
PRPF39-208ENST00000554785 CPPED1Q9BRF8 314 aaPredicted RBP1.97□□□□□ -2.09
PRPF39-208ENST00000554785 ADI1Q9BV57 179 aa1.97□□□□□ -2.09
PRPF39-208ENST00000554785 GREM2Q9H772 168 aa1.97□□□□□ -2.09
PRPF39-208ENST00000554785 GEMIN8Q9NWZ8 242 aaKnown RBP1.97□□□□□ -2.09
PRPF39-208ENST00000554785 GOLGA6AQ9NYA3 693 aa1.97□□□□□ -2.09
PRPF39-208ENST00000554785 SAP30BPQ9UHR5 308 aaKnown RBP1.97□□□□□ -2.09
PRPF39-208ENST00000554785 DNM3Q9UQ16 869 aa1.97□□□□□ -2.09
PRPF39-208ENST00000554785 TNFRSF18Q9Y5U5 241 aa1.97□□□□□ -2.09
PRPF39-208ENST00000554785 CFAP65Q6ZU64 1925 aaKnown RBP1.97□□□□□ -2.09
PRPF39-208ENST00000554785 PCSK5Q92824 1860 aa1.97□□□□□ -2.09
PRPF39-208ENST00000554785 PTPRTO14522 1441 aa1.96□□□□□ -2.09
PRPF39-208ENST00000554785 NCOA1Q15788 1441 aa1.96□□□□□ -2.09
PRPF39-208ENST00000554785 ZNF142P52746 1687 aaPredicted RBP1.96□□□□□ -2.1
PRPF39-208ENST00000554785 ABCA6Q8N139 1617 aa1.96□□□□□ -2.1
PRPF39-208ENST00000554785 RAPGEF6Q8TEU7 1601 aa1.96□□□□□ -2.1
PRPF39-208ENST00000554785 RPTORQ8N122 1335 aa1.96□□□□□ -2.1
PRPF39-208ENST00000554785 TMEM191CA6NGB0 347 aa1.96□□□□□ -2.1
PRPF39-208ENST00000554785 FOXN1O15353 648 aa1.96□□□□□ -2.1
PRPF39-208ENST00000554785 PRPF3O43395 683 aaKnown RBP1.96□□□□□ -2.1
PRPF39-208ENST00000554785 SCAF4O95104 1147 aaKnown RBP1.96□□□□□ -2.1
PRPF39-208ENST00000554785 POU2F2P09086 479 aa1.96□□□□□ -2.1
PRPF39-208ENST00000554785 LTA4HP09960 611 aaKnown RBP1.96□□□□□ -2.1
PRPF39-208ENST00000554785 ATF3P18847 181 aa1.96□□□□□ -2.1
PRPF39-208ENST00000554785 GNAT2P19087 354 aa1.96□□□□□ -2.1
PRPF39-208ENST00000554785 APOBEC3AP31941 199 aaPredicted RBP1.96□□□□□ -2.1
PRPF39-208ENST00000554785 WASP42768 502 aa1.96□□□□□ -2.1
PRPF39-208ENST00000554785 MCAMP43121 646 aa1.96□□□□□ -2.1
PRPF39-208ENST00000554785 MEF2AQ02078 507 aaPredicted RBP1.96□□□□□ -2.1
PRPF39-208ENST00000554785 MRPL49Q13405 166 aaKnown RBP1.96□□□□□ -2.1
PRPF39-208ENST00000554785 GFOD2Q3B7J2 385 aa1.96□□□□□ -2.1
PRPF39-208ENST00000554785 UAP1L1Q3KQV9 507 aa1.96□□□□□ -2.1
PRPF39-208ENST00000554785 LAIR1Q6GTX8 287 aa1.96□□□□□ -2.1
PRPF39-208ENST00000554785 MFSD5Q6N075 450 aa1.96□□□□□ -2.1
PRPF39-208ENST00000554785 TAS1R1Q7RTX1 841 aa1.96□□□□□ -2.1
PRPF39-208ENST00000554785 MRGPRGQ86SM5 289 aa1.96□□□□□ -2.1
PRPF39-208ENST00000554785 MAGEB6Q8N7X4 407 aa1.96□□□□□ -2.1
PRPF39-208ENST00000554785 GPR156Q8NFN8 814 aa1.96□□□□□ -2.1
PRPF39-208ENST00000554785 TTC8Q8TAM2 541 aa1.96□□□□□ -2.1
PRPF39-208ENST00000554785 CPT1CQ8TCG5 803 aa1.96□□□□□ -2.1
PRPF39-208ENST00000554785 RIN2Q8WYP3 895 aaPredicted RBP1.96□□□□□ -2.1
PRPF39-208ENST00000554785 HAS1Q92839 578 aa1.96□□□□□ -2.1
PRPF39-208ENST00000554785 LRGUKQ96M69 825 aa1.96□□□□□ -2.1
PRPF39-208ENST00000554785 AIFM3Q96NN9 605 aa1.96□□□□□ -2.1
PRPF39-208ENST00000554785 DMRT3Q9NQL9 472 aa1.96□□□□□ -2.1
PRPF39-208ENST00000554785 RBM12Q9NTZ6 932 aaKnown RBP1.96□□□□□ -2.1
PRPF39-208ENST00000554785 SCOCQ9UIL1 159 aa1.96□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms