RNA–Protein interactions for RNA: ENST00000554437.5

SCFD1-211, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-211ENST00000554437 ZNF703Q9H7S9 590 aaPredicted RBP6.5□□□□□ -1.37
SCFD1-211ENST00000554437 TRPM5Q9NZQ8 1165 aa6.5□□□□□ -1.37
SCFD1-211ENST00000554437 FAM30AQ9NZY2 134 aa6.5□□□□□ -1.37
SCFD1-211ENST00000554437 CEP72Q9P209 647 aa6.5□□□□□ -1.37
SCFD1-211ENST00000554437 GRXCR1A8MXD5 290 aa6.49□□□□□ -1.37
SCFD1-211ENST00000554437 TRIM24O15164 1050 aa6.49□□□□□ -1.37
SCFD1-211ENST00000554437 ALDH2P05091 517 aa6.49□□□□□ -1.37
SCFD1-211ENST00000554437 C1SP09871 688 aa6.49□□□□□ -1.37
SCFD1-211ENST00000554437 HK3P52790 923 aa6.49□□□□□ -1.37
SCFD1-211ENST00000554437 KRTAP10-2P60368 255 aa6.49□□□□□ -1.37
SCFD1-211ENST00000554437 SLC4A10Q6U841 1118 aa6.49□□□□□ -1.37
SCFD1-211ENST00000554437 B3GNT9Q6UX72 402 aa6.49□□□□□ -1.37
SCFD1-211ENST00000554437 HEATR3Q7Z4Q2 680 aa6.49□□□□□ -1.37
SCFD1-211ENST00000554437 PACSIN1Q9BY11 444 aa6.49□□□□□ -1.37
SCFD1-211ENST00000554437 ABCF2Q9UG63 623 aa6.49□□□□□ -1.37
SCFD1-211ENST00000554437 USP15Q9Y4E8 981 aaPredicted RBP6.49□□□□□ -1.37
SCFD1-211ENST00000554437 CDHR4A6H8M9 788 aa6.48□□□□□ -1.37
SCFD1-211ENST00000554437 DIRC3C9JPN6 131 aa6.48□□□□□ -1.37
SCFD1-211ENST00000554437 ZNF185O15231 689 aa6.48□□□□□ -1.37
SCFD1-211ENST00000554437 HAUS5O94927 633 aa6.48□□□□□ -1.37
SCFD1-211ENST00000554437 FOXE3Q13461 319 aa6.48□□□□□ -1.37
SCFD1-211ENST00000554437 FLYWCH1Q4VC44 716 aa6.48□□□□□ -1.37
SCFD1-211ENST00000554437 FAM102AQ5T9C2 384 aaPredicted RBP6.48□□□□□ -1.37
SCFD1-211ENST00000554437 TSHZ3Q63HK5 1081 aa6.48□□□□□ -1.37
SCFD1-211ENST00000554437 GDF7Q7Z4P5 450 aa6.48□□□□□ -1.37
SCFD1-211ENST00000554437 SH2D3CQ8N5H7 860 aa6.48□□□□□ -1.37
SCFD1-211ENST00000554437 FITM2Q8N6M3 262 aa6.48□□□□□ -1.37
SCFD1-211ENST00000554437 IL17RDQ8NFM7 739 aa6.48□□□□□ -1.37
SCFD1-211ENST00000554437 TBC1D15Q8TC07 691 aa6.48□□□□□ -1.37
SCFD1-211ENST00000554437 TAAR9Q96RI9 348 aa6.48□□□□□ -1.37
SCFD1-211ENST00000554437 CGRRF1Q99675 332 aa6.48□□□□□ -1.37
SCFD1-211ENST00000554437 ACO2Q99798 780 aaKnown RBP6.48□□□□□ -1.37
SCFD1-211ENST00000554437 LMBRD1Q9NUN5 540 aa6.48□□□□□ -1.37
SCFD1-211ENST00000554437 MYRFQ9Y2G1 1151 aa6.48□□□□□ -1.37
SCFD1-211ENST00000554437 NR2E3Q9Y5X4 410 aa6.48□□□□□ -1.37
SCFD1-211ENST00000554437 GOLGA6CA6NDK9 693 aa6.47□□□□□ -1.37
SCFD1-211ENST00000554437 GOLGA6BA6NDN3 693 aa6.47□□□□□ -1.37
SCFD1-211ENST00000554437 AHRRA9YTQ3 701 aa6.47□□□□□ -1.37
SCFD1-211ENST00000554437 F2RL2O00254 374 aa6.47□□□□□ -1.37
SCFD1-211ENST00000554437 CTNND1O60716 968 aaKnown RBP6.47□□□□□ -1.37
SCFD1-211ENST00000554437 PARNO95453 639 aaKnown RBP6.47□□□□□ -1.37
SCFD1-211ENST00000554437 SPATA31D3P0C874 917 aa6.47□□□□□ -1.37
SCFD1-211ENST00000554437 GOLGA6DP0CG33 693 aa6.47□□□□□ -1.37
SCFD1-211ENST00000554437 MYBP10242 640 aa6.47□□□□□ -1.37
SCFD1-211ENST00000554437 SLC6A4P31645 630 aa6.47□□□□□ -1.37
SCFD1-211ENST00000554437 DGCR2P98153 550 aa6.47□□□□□ -1.37
SCFD1-211ENST00000554437 SLC25A3Q00325 362 aa6.47□□□□□ -1.37
SCFD1-211ENST00000554437 ZXDCQ2QGD7 858 aaPredicted RBP6.47□□□□□ -1.37
SCFD1-211ENST00000554437 METRNLQ641Q3 311 aa6.47□□□□□ -1.37
SCFD1-211ENST00000554437 SPATA31D4Q6ZUB0 917 aa6.47□□□□□ -1.37
SCFD1-211ENST00000554437 DENND1CQ8IV53 801 aa6.47□□□□□ -1.37
SCFD1-211ENST00000554437 RHOT2Q8IXI1 618 aa6.47□□□□□ -1.37
SCFD1-211ENST00000554437 CDK5RAP3Q96JB5 506 aa6.47□□□□□ -1.37
SCFD1-211ENST00000554437 NEU1Q99519 415 aa6.47□□□□□ -1.37
SCFD1-211ENST00000554437 GNL3LQ9NVN8 582 aaKnown RBP6.47□□□□□ -1.37
SCFD1-211ENST00000554437 GOLGA6AQ9NYA3 693 aa6.47□□□□□ -1.37
SCFD1-211ENST00000554437 FEZ2Q9UHY8 353 aaPredicted RBP6.47□□□□□ -1.37
SCFD1-211ENST00000554437 ATP11BQ9Y2G3 1177 aa6.47□□□□□ -1.37
SCFD1-211ENST00000554437 STXBP5LQ9Y2K9 1186 aa6.47□□□□□ -1.37
SCFD1-211ENST00000554437 NT5C1B-RDH14C9J2C7 533 aa6.46□□□□□ -1.38
SCFD1-211ENST00000554437 H3BML4 177 aa6.46□□□□□ -1.38
SCFD1-211ENST00000554437 H3BUI4 141 aa6.46□□□□□ -1.38
SCFD1-211ENST00000554437 RPS6KA4O75676 772 aa6.46□□□□□ -1.38
SCFD1-211ENST00000554437 PRSS23O95084 383 aa6.46□□□□□ -1.38
SCFD1-211ENST00000554437 FTH1P19P0C7X4 201 aa6.46□□□□□ -1.38
SCFD1-211ENST00000554437 CKBP12277 381 aa6.46□□□□□ -1.38
SCFD1-211ENST00000554437 PUM1Q14671 1186 aaKnown RBP eCLIP6.46□□□□□ -1.38
SCFD1-211ENST00000554437 ARHGAP29Q52LW3 1261 aa6.46□□□□□ -1.38
SCFD1-211ENST00000554437 PDCD4Q53EL6 469 aaKnown RBP6.46□□□□□ -1.38
SCFD1-211ENST00000554437 UTP14CQ5TAP6 766 aaKnown RBP6.46□□□□□ -1.38
SCFD1-211ENST00000554437 AGAP9Q5VTM2 703 aa6.46□□□□□ -1.38
SCFD1-211ENST00000554437 C14orf80Q86SX3 495 aa6.46□□□□□ -1.38
SCFD1-211ENST00000554437 ZNF276Q8N554 614 aa6.46□□□□□ -1.38
SCFD1-211ENST00000554437 ZBTB34Q8NCN2 500 aa6.46□□□□□ -1.38
SCFD1-211ENST00000554437 OR56A1Q8NGH5 318 aa6.46□□□□□ -1.38
SCFD1-211ENST00000554437 PPP1R35Q8TAP8 253 aa6.46□□□□□ -1.38
SCFD1-211ENST00000554437 CACTINQ8WUQ7 758 aaKnown RBP6.46□□□□□ -1.38
SCFD1-211ENST00000554437 ZNF503Q96F45 646 aa6.46□□□□□ -1.38
SCFD1-211ENST00000554437 FAM167AQ96KS9 214 aa6.46□□□□□ -1.38
SCFD1-211ENST00000554437 TEX101Q9BY14 249 aa6.46□□□□□ -1.38
SCFD1-211ENST00000554437 ZNF341Q9BYN7 854 aa6.46□□□□□ -1.38
SCFD1-211ENST00000554437 ZNF768Q9H5H4 540 aaKnown RBP6.46□□□□□ -1.38
SCFD1-211ENST00000554437 WDCPQ9H6R7 721 aa6.46□□□□□ -1.38
SCFD1-211ENST00000554437 PNPOQ9NVS9 261 aa6.46□□□□□ -1.38
SCFD1-211ENST00000554437 JKAMPQ9P055 326 aa6.46□□□□□ -1.38
SCFD1-211ENST00000554437 CHPF2Q9P2E5 772 aa6.46□□□□□ -1.38
SCFD1-211ENST00000554437 CHST2Q9Y4C5 530 aa6.46□□□□□ -1.38
SCFD1-211ENST00000554437 SLC43A1O75387 559 aa6.45□□□□□ -1.38
SCFD1-211ENST00000554437 UBXN7O94888 489 aa6.45□□□□□ -1.38
SCFD1-211ENST00000554437 AGFG2O95081 481 aa6.45□□□□□ -1.38
SCFD1-211ENST00000554437 GNAI3P08754 354 aa6.45□□□□□ -1.38
SCFD1-211ENST00000554437 TYRP14679 529 aa6.45□□□□□ -1.38
SCFD1-211ENST00000554437 ATF3P18847 181 aa6.45□□□□□ -1.38
SCFD1-211ENST00000554437 GCSHP23434 173 aa6.45□□□□□ -1.38
SCFD1-211ENST00000554437 PRDX5P30044 214 aa6.45□□□□□ -1.38
SCFD1-211ENST00000554437 IL12RB1P42701 662 aa6.45□□□□□ -1.38
SCFD1-211ENST00000554437 GNAI1P63096 354 aa6.45□□□□□ -1.38
SCFD1-211ENST00000554437 LSM12Q3MHD2 195 aaKnown RBP6.45□□□□□ -1.38
SCFD1-211ENST00000554437 CCDC93Q567U6 631 aa6.45□□□□□ -1.38
SCFD1-211ENST00000554437 MIIPQ5JXC2 388 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 116.4 ms