RNA–Protein interactions for RNA: ENST00000554384.1

CHD8-207, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 3

Gene CHD8, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-207ENST00000554384 IL31RAQ8NI17 732 aa6.44□□□□□ -1.38
CHD8-207ENST00000554384 MRGPRX1Q96LB2 322 aa6.44□□□□□ -1.38
CHD8-207ENST00000554384 RPS6KC1Q96S38 1066 aa6.44□□□□□ -1.38
CHD8-207ENST00000554384 P2RX7Q99572 595 aaKnown RBP6.44□□□□□ -1.38
CHD8-207ENST00000554384 NDC1Q9BTX1 674 aa6.44□□□□□ -1.38
CHD8-207ENST00000554384 ZCCHC4Q9H5U6 513 aa6.44□□□□□ -1.38
CHD8-207ENST00000554384 RTEL1Q9NZ71 1219 aa6.44□□□□□ -1.38
CHD8-207ENST00000554384 HECAQ9UBI9 543 aaPredicted RBP6.44□□□□□ -1.38
CHD8-207ENST00000554384 FEZ2Q9UHY8 353 aaPredicted RBP6.44□□□□□ -1.38
CHD8-207ENST00000554384 PHTF1Q9UMS5 762 aa6.44□□□□□ -1.38
CHD8-207ENST00000554384 ANO9A1A5B4 782 aa6.43□□□□□ -1.38
CHD8-207ENST00000554384 NPEPPSL1A6NEC2 478 aa6.43□□□□□ -1.38
CHD8-207ENST00000554384 TBKBP1A7MCY6 615 aa6.43□□□□□ -1.38
CHD8-207ENST00000554384 GPR42O15529 346 aa6.43□□□□□ -1.38
CHD8-207ENST00000554384 PIK3CBP42338 1070 aa6.43□□□□□ -1.38
CHD8-207ENST00000554384 KHDC1LQ5JSQ8 128 aa6.43□□□□□ -1.38
CHD8-207ENST00000554384 SLFN13Q68D06 897 aa6.43□□□□□ -1.38
CHD8-207ENST00000554384 FUKQ8N0W3 1084 aa6.43□□□□□ -1.38
CHD8-207ENST00000554384 CPPED1Q9BRF8 314 aaPredicted RBP6.43□□□□□ -1.38
CHD8-207ENST00000554384 GSTO2Q9H4Y5 243 aa6.43□□□□□ -1.38
CHD8-207ENST00000554384 SPON1Q9HCB6 807 aa6.43□□□□□ -1.38
CHD8-207ENST00000554384 BICRAQ9NZM4 1560 aa6.43□□□□□ -1.38
CHD8-207ENST00000554384 PRSS23O95084 383 aa6.42□□□□□ -1.38
CHD8-207ENST00000554384 ARIH2O95376 493 aa6.42□□□□□ -1.38
CHD8-207ENST00000554384 MATN4O95460 622 aa6.42□□□□□ -1.38
CHD8-207ENST00000554384 IFIT2P09913 472 aaKnown RBP6.42□□□□□ -1.38
CHD8-207ENST00000554384 PHKG2P15735 406 aa6.42□□□□□ -1.38
CHD8-207ENST00000554384 HK1P19367 917 aa6.42□□□□□ -1.38
CHD8-207ENST00000554384 CACNB3P54284 484 aa6.42□□□□□ -1.38
CHD8-207ENST00000554384 CLRN1P58418 232 aa6.42□□□□□ -1.38
CHD8-207ENST00000554384 GPSM2P81274 684 aa6.42□□□□□ -1.38
CHD8-207ENST00000554384 PTH1RQ03431 593 aa6.42□□□□□ -1.38
CHD8-207ENST00000554384 BIRC2Q13490 618 aa6.42□□□□□ -1.38
CHD8-207ENST00000554384 HDAC1Q13547 482 aaPredicted RBP6.42□□□□□ -1.38
CHD8-207ENST00000554384 ELAVL1Q15717 326 aaKnown RBP6.42□□□□□ -1.38
CHD8-207ENST00000554384 LONRF1Q17RB8 773 aa6.42□□□□□ -1.38
CHD8-207ENST00000554384 BMT2Q1RMZ1 405 aa6.42□□□□□ -1.38
CHD8-207ENST00000554384 PABPC1LQ4VXU2 614 aaKnown RBP6.42□□□□□ -1.38
CHD8-207ENST00000554384 SEM1Q6ZVN7 128 aa6.42□□□□□ -1.38
CHD8-207ENST00000554384 MB21D1Q8N884 522 aa6.42□□□□□ -1.38
CHD8-207ENST00000554384 PCSK9Q8NBP7 692 aaKnown RBP6.42□□□□□ -1.38
CHD8-207ENST00000554384 PHACTR3Q96KR7 559 aa6.42□□□□□ -1.38
CHD8-207ENST00000554384 NELFAQ9H3P2 528 aa6.42□□□□□ -1.38
CHD8-207ENST00000554384 PARD6AQ9NPB6 346 aa6.42□□□□□ -1.38
CHD8-207ENST00000554384 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.42□□□□□ -1.38
CHD8-207ENST00000554384 CPNE7Q9UBL6 633 aa6.42□□□□□ -1.38
CHD8-207ENST00000554384 TPCN1Q9ULQ1 816 aa6.42□□□□□ -1.38
CHD8-207ENST00000554384 CORO2BQ9UQ03 480 aa6.42□□□□□ -1.38
CHD8-207ENST00000554384 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.42□□□□□ -1.38
CHD8-207ENST00000554384 A0A1W2PPL8 197 aa6.41□□□□□ -1.38
CHD8-207ENST00000554384 TBX3O15119 743 aa6.41□□□□□ -1.38
CHD8-207ENST00000554384 PHGDHO43175 533 aaKnown RBP6.41□□□□□ -1.38
CHD8-207ENST00000554384 MYF5P13349 255 aa6.41□□□□□ -1.38
CHD8-207ENST00000554384 SLC7A1P30825 629 aa6.41□□□□□ -1.38
CHD8-207ENST00000554384 PSMC1P62191 440 aaKnown RBP6.41□□□□□ -1.38
CHD8-207ENST00000554384 NOMO3P69849 1222 aa6.41□□□□□ -1.38
CHD8-207ENST00000554384 UBXN2BQ14CS0 331 aa6.41□□□□□ -1.38
CHD8-207ENST00000554384 CCDC93Q567U6 631 aa6.41□□□□□ -1.38
CHD8-207ENST00000554384 DACT2Q5SW24 774 aa6.41□□□□□ -1.38
CHD8-207ENST00000554384 GPRIN1Q7Z2K8 1008 aa6.41□□□□□ -1.38
CHD8-207ENST00000554384 D2HGDHQ8N465 521 aa6.41□□□□□ -1.38
CHD8-207ENST00000554384 IL17RDQ8NFM7 739 aa6.41□□□□□ -1.38
CHD8-207ENST00000554384 ANKS1AQ92625 1134 aa6.41□□□□□ -1.38
CHD8-207ENST00000554384 TFAP2CQ92754 450 aa6.41□□□□□ -1.38
CHD8-207ENST00000554384 MTFMTQ96DP5 389 aaKnown RBP6.41□□□□□ -1.38
CHD8-207ENST00000554384 BORCS6Q96GS4 357 aa6.41□□□□□ -1.38
CHD8-207ENST00000554384 FAM167AQ96KS9 214 aa6.41□□□□□ -1.38
CHD8-207ENST00000554384 STRBPQ96SI9 672 aaKnown RBP6.41□□□□□ -1.38
CHD8-207ENST00000554384 WDCPQ9H6R7 721 aa6.41□□□□□ -1.38
CHD8-207ENST00000554384 RSAD1Q9HA92 442 aa6.41□□□□□ -1.38
CHD8-207ENST00000554384 SARS2Q9NP81 518 aaKnown RBP6.41□□□□□ -1.38
CHD8-207ENST00000554384 STK32BQ9NY57 414 aa6.41□□□□□ -1.38
CHD8-207ENST00000554384 ZFR2Q9UPR6 939 aaKnown RBP6.41□□□□□ -1.38
CHD8-207ENST00000554384 HDAC5Q9UQL6 1122 aa6.41□□□□□ -1.38
CHD8-207ENST00000554384 CUX2O14529 1486 aa6.41□□□□□ -1.38
CHD8-207ENST00000554384 CDHR4A6H8M9 788 aa6.4□□□□□ -1.38
CHD8-207ENST00000554384 B5MCH6 92 aa6.4□□□□□ -1.38
CHD8-207ENST00000554384 KPNA5O15131 536 aa6.4□□□□□ -1.38
CHD8-207ENST00000554384 TEX33O43247 280 aa6.4□□□□□ -1.38
CHD8-207ENST00000554384 GJB1P08034 283 aa6.4□□□□□ -1.38
CHD8-207ENST00000554384 SNRPA1P09661 255 aaKnown RBP6.4□□□□□ -1.38
CHD8-207ENST00000554384 MTHFD1P11586 935 aaKnown RBP6.4□□□□□ -1.38
CHD8-207ENST00000554384 RPS19P39019 145 aaKnown RBP6.4□□□□□ -1.38
CHD8-207ENST00000554384 PIK3CGP48736 1102 aa6.4□□□□□ -1.38
CHD8-207ENST00000554384 ALDH5A1P51649 535 aaPredicted RBP6.4□□□□□ -1.38
CHD8-207ENST00000554384 SUMO3P55854 103 aaPredicted RBP6.4□□□□□ -1.38
CHD8-207ENST00000554384 SOX8P57073 446 aa6.4□□□□□ -1.38
CHD8-207ENST00000554384 BRD3Q15059 726 aa6.4□□□□□ -1.38
CHD8-207ENST00000554384 SURF1Q15526 300 aa6.4□□□□□ -1.38
CHD8-207ENST00000554384 UBXN11Q5T124 520 aa6.4□□□□□ -1.38
CHD8-207ENST00000554384 SPTY2D1Q68D10 685 aaPredicted RBP6.4□□□□□ -1.38
CHD8-207ENST00000554384 PGBD4Q96DM1 585 aa6.4□□□□□ -1.38
CHD8-207ENST00000554384 APIPQ96GX9 242 aa6.4□□□□□ -1.38
CHD8-207ENST00000554384 MRPS18AQ9NVS2 196 aaKnown RBP6.4□□□□□ -1.38
CHD8-207ENST00000554384 DAAM1Q9Y4D1 1078 aa6.4□□□□□ -1.38
CHD8-207ENST00000554384 A0A0G2JLL6 359 aaPredicted RBP6.39□□□□□ -1.39
CHD8-207ENST00000554384 MYO1FO00160 1098 aa6.39□□□□□ -1.39
CHD8-207ENST00000554384 MGEA5O60502 916 aa6.39□□□□□ -1.39
CHD8-207ENST00000554384 SLC43A1O75387 559 aa6.39□□□□□ -1.39
CHD8-207ENST00000554384 RAD17O75943 681 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms