RNA–Protein interactions for RNA: ENST00000553989.1

TDP1-208, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-208ENST00000553989 MRPS23Q9Y3D9 190 aaKnown RBP9.7□□□□□ -0.86
TDP1-208ENST00000553989 CDY1Q9Y6F8 540 aa9.7□□□□□ -0.86
TDP1-208ENST00000553989 MTCL1Q9Y4B5 1905 aaKnown RBP9.7□□□□□ -0.86
TDP1-208ENST00000553989 CCDC169A6NNP5 214 aa9.69□□□□□ -0.86
TDP1-208ENST00000553989 ESPNB1AK53 854 aa9.69□□□□□ -0.86
TDP1-208ENST00000553989 I3L4J1 428 aa9.69□□□□□ -0.86
TDP1-208ENST00000553989 PRRG1O14668 218 aa9.69□□□□□ -0.86
TDP1-208ENST00000553989 PRPF40AO75400 957 aaKnown RBP9.69□□□□□ -0.86
TDP1-208ENST00000553989 LRG1P02750 347 aa9.69□□□□□ -0.86
TDP1-208ENST00000553989 RPA1P27694 616 aa9.69□□□□□ -0.86
TDP1-208ENST00000553989 TKTP29401 623 aaKnown RBP9.69□□□□□ -0.86
TDP1-208ENST00000553989 EFNA5P52803 228 aa9.69□□□□□ -0.86
TDP1-208ENST00000553989 ARPP19P56211 112 aa9.69□□□□□ -0.86
TDP1-208ENST00000553989 STARD6P59095 220 aa9.69□□□□□ -0.86
TDP1-208ENST00000553989 OSTNP61366 133 aa9.69□□□□□ -0.86
TDP1-208ENST00000553989 PRKCQQ04759 706 aa9.69□□□□□ -0.86
TDP1-208ENST00000553989 RAB33AQ14088 237 aa9.69□□□□□ -0.86
TDP1-208ENST00000553989 UVSSAQ2YD98 709 aa9.69□□□□□ -0.86
TDP1-208ENST00000553989 ZNF568Q3ZCX4 644 aa9.69□□□□□ -0.86
TDP1-208ENST00000553989 SLC44A4Q53GD3 710 aa9.69□□□□□ -0.86
TDP1-208ENST00000553989 ANKS3Q6ZW76 656 aa9.69□□□□□ -0.86
TDP1-208ENST00000553989 DGLUCYQ7Z3D6 616 aa9.69□□□□□ -0.86
TDP1-208ENST00000553989 NPAS3Q8IXF0 933 aa9.69□□□□□ -0.86
TDP1-208ENST00000553989 RUBCNQ92622 972 aa9.69□□□□□ -0.86
TDP1-208ENST00000553989 KIFAP3Q92845 792 aa9.69□□□□□ -0.86
TDP1-208ENST00000553989 MCRS1Q96EZ8 462 aa9.69□□□□□ -0.86
TDP1-208ENST00000553989 ZSCAN31Q96LW9 406 aaPredicted RBP9.69□□□□□ -0.86
TDP1-208ENST00000553989 UROC1Q96N76 676 aa9.69□□□□□ -0.86
TDP1-208ENST00000553989 CCDC94Q9BW85 323 aaPredicted RBP9.69□□□□□ -0.86
TDP1-208ENST00000553989 CCDC113Q9H0I3 377 aa9.69□□□□□ -0.86
TDP1-208ENST00000553989 BHMT2Q9H2M3 363 aa9.69□□□□□ -0.86
TDP1-208ENST00000553989 GOLGA2P5Q9HBQ8 144 aa9.69□□□□□ -0.86
TDP1-208ENST00000553989 POLD4Q9HCU8 107 aa9.69□□□□□ -0.86
TDP1-208ENST00000553989 TOPORSQ9NS56 1045 aaPredicted RBP9.69□□□□□ -0.86
TDP1-208ENST00000553989 DLGAP2Q9P1A6 1054 aa9.69□□□□□ -0.86
TDP1-208ENST00000553989 DNMT3BQ9UBC3 853 aaKnown RBP9.69□□□□□ -0.86
TDP1-208ENST00000553989 MTRRQ9UBK8 725 aa9.69□□□□□ -0.86
TDP1-208ENST00000553989 KCNH3Q9ULD8 1083 aa9.69□□□□□ -0.86
TDP1-208ENST00000553989 ATP6V1DQ9Y5K8 247 aa9.69□□□□□ -0.86
TDP1-208ENST00000553989 FAM170BA6NMN3 283 aa9.68□□□□□ -0.86
TDP1-208ENST00000553989 TMEM189-UBE2V1I3L0A0 370 aa9.68□□□□□ -0.86
TDP1-208ENST00000553989 K7ERI5 159 aa9.68□□□□□ -0.86
TDP1-208ENST00000553989 HAX1O00165 279 aa9.68□□□□□ -0.86
TDP1-208ENST00000553989 EDN1P05305 212 aa9.68□□□□□ -0.86
TDP1-208ENST00000553989 RHOP08100 348 aa9.68□□□□□ -0.86
TDP1-208ENST00000553989 HARSP12081 509 aaKnown RBP9.68□□□□□ -0.86
TDP1-208ENST00000553989 GLULP15104 373 aa9.68□□□□□ -0.86
TDP1-208ENST00000553989 CD72P21854 359 aa9.68□□□□□ -0.86
TDP1-208ENST00000553989 FGFR3P22607 806 aa9.68□□□□□ -0.86
TDP1-208ENST00000553989 BRCC3P46736 316 aa9.68□□□□□ -0.86
TDP1-208ENST00000553989 NASPP49321 788 aaPredicted RBP9.68□□□□□ -0.86
TDP1-208ENST00000553989 CSTF1Q05048 431 aaKnown RBP9.68□□□□□ -0.86
TDP1-208ENST00000553989 DMP1Q13316 513 aaPredicted RBP9.68□□□□□ -0.86
TDP1-208ENST00000553989 NAB2Q15742 525 aa9.68□□□□□ -0.86
TDP1-208ENST00000553989 TTC38Q5R3I4 469 aa9.68□□□□□ -0.86
TDP1-208ENST00000553989 ZBTB41Q5SVQ8 909 aa9.68□□□□□ -0.86
TDP1-208ENST00000553989 TPRG1Q6ZUI0 275 aa9.68□□□□□ -0.86
TDP1-208ENST00000553989 GAS2L3Q86XJ1 694 aa9.68□□□□□ -0.86
TDP1-208ENST00000553989 RMDN1Q96DB5 314 aa9.68□□□□□ -0.86
TDP1-208ENST00000553989 PPP1R10Q96QC0 940 aaKnown RBP9.68□□□□□ -0.86
TDP1-208ENST00000553989 TCHPQ9BT92 498 aa9.68□□□□□ -0.86
TDP1-208ENST00000553989 LTB4R2Q9NPC1 389 aa9.68□□□□□ -0.86
TDP1-208ENST00000553989 SLC38A7Q9NVC3 462 aa9.68□□□□□ -0.86
TDP1-208ENST00000553989 NCDNQ9UBB6 729 aa9.68□□□□□ -0.86
TDP1-208ENST00000553989 NOL7Q9UMY1 257 aaKnown RBP9.68□□□□□ -0.86
TDP1-208ENST00000553989 KIAA1024Q9UPX6 916 aa9.68□□□□□ -0.86
TDP1-208ENST00000553989 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.68□□□□□ -0.86
TDP1-208ENST00000553989 NUB1Q9Y5A7 615 aa9.68□□□□□ -0.86
TDP1-208ENST00000553989 MYH15Q9Y2K3 1946 aa9.68□□□□□ -0.86
TDP1-208ENST00000553989 PHLPP2Q6ZVD8 1323 aa9.67□□□□□ -0.86
TDP1-208ENST00000553989 PODXLO00592 558 aa9.67□□□□□ -0.86
TDP1-208ENST00000553989 NCAM2O15394 837 aa9.67□□□□□ -0.86
TDP1-208ENST00000553989 POU2F2P09086 479 aa9.67□□□□□ -0.86
TDP1-208ENST00000553989 PEX3P56589 373 aa9.67□□□□□ -0.86
TDP1-208ENST00000553989 ORC2Q13416 577 aaPredicted RBP9.67□□□□□ -0.86
TDP1-208ENST00000553989 UPP1Q16831 310 aa9.67□□□□□ -0.86
TDP1-208ENST00000553989 NT5DC1Q5TFE4 455 aa9.67□□□□□ -0.86
TDP1-208ENST00000553989 CCDC83Q8IWF9 413 aa9.67□□□□□ -0.86
TDP1-208ENST00000553989 ELMOD1Q8N336 334 aa9.67□□□□□ -0.86
TDP1-208ENST00000553989 DCLK2Q8N568 766 aa9.67□□□□□ -0.86
TDP1-208ENST00000553989 CEP120Q8N960 986 aa9.67□□□□□ -0.86
TDP1-208ENST00000553989 FAM184AQ8NB25 1140 aa9.67□□□□□ -0.86
TDP1-208ENST00000553989 SNX29Q8TEQ0 813 aa9.67□□□□□ -0.86
TDP1-208ENST00000553989 ATRIPQ8WXE1 791 aa9.67□□□□□ -0.86
TDP1-208ENST00000553989 SECISBP2LQ93073 1101 aaKnown RBP9.67□□□□□ -0.86
TDP1-208ENST00000553989 CORO1BQ9BR76 489 aa9.67□□□□□ -0.86
TDP1-208ENST00000553989 MRPL4Q9BYD3 311 aaKnown RBP9.67□□□□□ -0.86
TDP1-208ENST00000553989 RAB34Q9BZG1 259 aa9.67□□□□□ -0.86
TDP1-208ENST00000553989 CYP4F11Q9HBI6 524 aa9.67□□□□□ -0.86
TDP1-208ENST00000553989 RRAGDQ9NQL2 400 aaPredicted RBP9.67□□□□□ -0.86
TDP1-208ENST00000553989 DDX19AQ9NUU7 478 aaKnown RBP9.67□□□□□ -0.86
TDP1-208ENST00000553989 GDE1Q9NZC3 331 aa9.67□□□□□ -0.86
TDP1-208ENST00000553989 LRWD1Q9UFC0 647 aa9.67□□□□□ -0.86
TDP1-208ENST00000553989 TNFSF13BQ9Y275 285 aa9.67□□□□□ -0.86
TDP1-208ENST00000553989 MRPS17Q9Y2R5 130 aaKnown RBP9.67□□□□□ -0.86
TDP1-208ENST00000553989 MTF2Q9Y483 593 aaPredicted RBP9.67□□□□□ -0.86
TDP1-208ENST00000553989 BACE2Q9Y5Z0 518 aa9.67□□□□□ -0.86
TDP1-208ENST00000553989 GVINP1Q7Z2Y8 2422 aa9.66□□□□□ -0.86
TDP1-208ENST00000553989 SPTBN4Q9H254 2564 aa9.66□□□□□ -0.86
TDP1-208ENST00000553989 SMIM28A0A1B0GU29 152 aa9.66□□□□□ -0.86
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