RNA–Protein interactions for RNA: ENST00000553719.5

PSEN1-208, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-208ENST00000553719 DNAJB4Q9UDY4 337 aa19.51■□□□□ 0.71
PSEN1-208ENST00000553719 LIMA1Q9UHB6 759 aaKnown RBP19.51■□□□□ 0.71
PSEN1-208ENST00000553719 SIX4Q9UIU6 781 aa19.51■□□□□ 0.71
PSEN1-208ENST00000553719 PCDHA11Q9Y5I1 949 aa19.51■□□□□ 0.71
PSEN1-208ENST00000553719 HSFX4A0A1B0GTS1 333 aaPredicted RBP19.5■□□□□ 0.71
PSEN1-208ENST00000553719 HSFX3A0A1B0GWH4 333 aaPredicted RBP19.5■□□□□ 0.71
PSEN1-208ENST00000553719 ANO9A1A5B4 782 aa19.5■□□□□ 0.71
PSEN1-208ENST00000553719 PMM2O15305 246 aa19.5■□□□□ 0.71
PSEN1-208ENST00000553719 ARHGEF15O94989 841 aa19.5■□□□□ 0.71
PSEN1-208ENST00000553719 TNNI1P19237 187 aa19.5■□□□□ 0.71
PSEN1-208ENST00000553719 TFAMQ00059 246 aaKnown RBP19.5■□□□□ 0.71
PSEN1-208ENST00000553719 KRT31Q15323 416 aa19.5■□□□□ 0.71
PSEN1-208ENST00000553719 DUOXA2Q1HG44 320 aa19.5■□□□□ 0.71
PSEN1-208ENST00000553719 DCAF17Q5H9S7 520 aaPredicted RBP19.5■□□□□ 0.71
PSEN1-208ENST00000553719 TDRD10Q5VZ19 366 aaKnown RBP19.5■□□□□ 0.71
PSEN1-208ENST00000553719 SV2AQ7L0J3 742 aa19.5■□□□□ 0.71
PSEN1-208ENST00000553719 BEST2Q8NFU1 509 aa19.5■□□□□ 0.71
PSEN1-208ENST00000553719 PAAF1Q9BRP4 392 aa19.5■□□□□ 0.71
PSEN1-208ENST00000553719 TMEM175Q9BSA9 504 aa19.5■□□□□ 0.71
PSEN1-208ENST00000553719 PBX4Q9BYU1 374 aa19.5■□□□□ 0.71
PSEN1-208ENST00000553719 RBSNQ9H1K0 784 aa19.5■□□□□ 0.71
PSEN1-208ENST00000553719 TMEM8AQ9HCN3 771 aa19.5■□□□□ 0.71
PSEN1-208ENST00000553719 YBX2Q9Y2T7 364 aaKnown RBP19.5■□□□□ 0.71
PSEN1-208ENST00000553719 NLRC5Q86WI3 1866 aa19.5■□□□□ 0.71
PSEN1-208ENST00000553719 XPOTO43592 962 aaKnown RBP19.49■□□□□ 0.71
PSEN1-208ENST00000553719 TMEM191BP0C7N4 346 aa19.49■□□□□ 0.71
PSEN1-208ENST00000553719 MYOGP15173 224 aa19.49■□□□□ 0.71
PSEN1-208ENST00000553719 GCLMP48507 274 aa19.49■□□□□ 0.71
PSEN1-208ENST00000553719 MAN2A1Q16706 1144 aa19.49■□□□□ 0.71
PSEN1-208ENST00000553719 UPP1Q16831 310 aa19.49■□□□□ 0.71
PSEN1-208ENST00000553719 CBWD6Q4V339 395 aa19.49■□□□□ 0.71
PSEN1-208ENST00000553719 CBWD3Q5JTY5 395 aa19.49■□□□□ 0.71
PSEN1-208ENST00000553719 CBWD5Q5RIA9 395 aa19.49■□□□□ 0.71
PSEN1-208ENST00000553719 CD300LGQ6UXG3 332 aa19.49■□□□□ 0.71
PSEN1-208ENST00000553719 TRAPPC11Q7Z392 1133 aa19.49■□□□□ 0.71
PSEN1-208ENST00000553719 RNF214Q8ND24 703 aa19.49■□□□□ 0.71
PSEN1-208ENST00000553719 CACTINQ8WUQ7 758 aaKnown RBP19.49■□□□□ 0.71
PSEN1-208ENST00000553719 ANKRD36BP1Q96IX9 119 aa19.49■□□□□ 0.71
PSEN1-208ENST00000553719 UROC1Q96N76 676 aa19.49■□□□□ 0.71
PSEN1-208ENST00000553719 TUBGCP2Q9BSJ2 902 aa19.49■□□□□ 0.71
PSEN1-208ENST00000553719 DPP3Q9NY33 737 aa19.49■□□□□ 0.71
PSEN1-208ENST00000553719 MAGEC2Q9UBF1 373 aaPredicted RBP19.49■□□□□ 0.71
PSEN1-208ENST00000553719 CACNG4Q9UBN1 327 aa19.49■□□□□ 0.71
PSEN1-208ENST00000553719 ITGA11Q9UKX5 1188 aa19.49■□□□□ 0.71
PSEN1-208ENST00000553719 COLQQ9Y215 455 aaPredicted RBP19.49■□□□□ 0.71
PSEN1-208ENST00000553719 COQ4Q9Y3A0 265 aa19.49■□□□□ 0.71
PSEN1-208ENST00000553719 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.49■□□□□ 0.71
PSEN1-208ENST00000553719 TRIOBPQ9H2D6 2365 aa19.49■□□□□ 0.71
PSEN1-208ENST00000553719 SCN1AP35498 2009 aa19.49■□□□□ 0.71
PSEN1-208ENST00000553719 LINC01553A4QN01 128 aa19.48■□□□□ 0.71
PSEN1-208ENST00000553719 CASTOR2A6NHX0 329 aa19.48■□□□□ 0.71
PSEN1-208ENST00000553719 PIRO00625 290 aa19.48■□□□□ 0.71
PSEN1-208ENST00000553719 PPEF2O14830 753 aa19.48■□□□□ 0.71
PSEN1-208ENST00000553719 STX10O60499 249 aa19.48■□□□□ 0.71
PSEN1-208ENST00000553719 VNN1O95497 513 aa19.48■□□□□ 0.71
PSEN1-208ENST00000553719 GALTP07902 379 aa19.48■□□□□ 0.71
PSEN1-208ENST00000553719 RPL9P32969 192 aaKnown RBP19.48■□□□□ 0.71
PSEN1-208ENST00000553719 PBX2P40425 430 aa19.48■□□□□ 0.71
PSEN1-208ENST00000553719 MTIF2P46199 727 aaKnown RBP19.48■□□□□ 0.71
PSEN1-208ENST00000553719 SLC11A1P49279 550 aa19.48■□□□□ 0.71
PSEN1-208ENST00000553719 FMO5P49326 533 aa19.48■□□□□ 0.71
PSEN1-208ENST00000553719 RNASELQ05823 741 aaKnown RBP19.48■□□□□ 0.71
PSEN1-208ENST00000553719 KCNH2Q12809 1159 aa19.48■□□□□ 0.71
PSEN1-208ENST00000553719 LRIT3Q3SXY7 679 aa19.48■□□□□ 0.71
PSEN1-208ENST00000553719 TCERG1LQ5VWI1 586 aa19.48■□□□□ 0.71
PSEN1-208ENST00000553719 C9orf57Q5W0N0 161 aa19.48■□□□□ 0.71
PSEN1-208ENST00000553719 KRT39Q6A163 491 aa19.48■□□□□ 0.71
PSEN1-208ENST00000553719 FIBCD1Q8N539 461 aa19.48■□□□□ 0.71
PSEN1-208ENST00000553719 C3orf58Q8NDZ4 430 aa19.48■□□□□ 0.71
PSEN1-208ENST00000553719 MARCH5Q9NX47 278 aa19.48■□□□□ 0.71
PSEN1-208ENST00000553719 TMEM189-UBE2V1I3L0A0 370 aa19.47■□□□□ 0.71
PSEN1-208ENST00000553719 ZC3H11AO75152 810 aaKnown RBP eCLIP19.47■□□□□ 0.71
PSEN1-208ENST00000553719 EFEMP2O95967 443 aa19.47■□□□□ 0.71
PSEN1-208ENST00000553719 TNNC2P02585 160 aa19.47■□□□□ 0.71
PSEN1-208ENST00000553719 AFPP02771 609 aaKnown RBP19.47■□□□□ 0.71
PSEN1-208ENST00000553719 ITGB3P05106 788 aa19.47■□□□□ 0.71
PSEN1-208ENST00000553719 CA3P07451 260 aa19.47■□□□□ 0.71
PSEN1-208ENST00000553719 IGFBP6P24592 240 aaPredicted RBP19.47■□□□□ 0.71
PSEN1-208ENST00000553719 MXI1P50539 228 aa19.47■□□□□ 0.71
PSEN1-208ENST00000553719 CLCNKBP51801 687 aa19.47■□□□□ 0.71
PSEN1-208ENST00000553719 COPB1P53618 953 aaKnown RBP19.47■□□□□ 0.71
PSEN1-208ENST00000553719 SMAD3P84022 425 aaKnown RBP19.47■□□□□ 0.71
PSEN1-208ENST00000553719 TAB2Q9NYJ8 693 aa19.47■□□□□ 0.71
PSEN1-208ENST00000553719 F8W810 466 aa19.46■□□□□ 0.71
PSEN1-208ENST00000553719 GOLGA6L19H0YKK7 550 aa19.46■□□□□ 0.71
PSEN1-208ENST00000553719 PODXLO00592 558 aa19.46■□□□□ 0.71
PSEN1-208ENST00000553719 NRP1O14786 923 aa19.46■□□□□ 0.71
PSEN1-208ENST00000553719 P4HA2O15460 535 aa19.46■□□□□ 0.71
PSEN1-208ENST00000553719 LAG3P18627 525 aa19.46■□□□□ 0.71
PSEN1-208ENST00000553719 AARSP49588 968 aaKnown RBP eCLIP19.46■□□□□ 0.71
PSEN1-208ENST00000553719 BCAR1P56945 870 aa19.46■□□□□ 0.71
PSEN1-208ENST00000553719 RAB30Q15771 203 aa19.46■□□□□ 0.71
PSEN1-208ENST00000553719 VWA3BQ502W6 1294 aa19.46■□□□□ 0.71
PSEN1-208ENST00000553719 EPC2Q52LR7 807 aa19.46■□□□□ 0.71
PSEN1-208ENST00000553719 TMEM173Q86WV6 379 aaPredicted RBP19.46■□□□□ 0.71
PSEN1-208ENST00000553719 LRRC52Q8N7C0 313 aa19.46■□□□□ 0.71
PSEN1-208ENST00000553719 COLGALT1Q8NBJ5 622 aa19.46■□□□□ 0.71
PSEN1-208ENST00000553719 TAS1R2Q8TE23 839 aa19.46■□□□□ 0.71
PSEN1-208ENST00000553719 BCL7CQ8WUZ0 217 aaPredicted RBP19.46■□□□□ 0.71
PSEN1-208ENST00000553719 DDX27Q96GQ7 796 aaKnown RBP19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms