RNA–Protein interactions for RNA: ENST00000553427.5

CPSF2-202, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 715 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-202ENST00000553427 TGFB1I1O43294 461 aa20.05■□□□□ 0.8
CPSF2-202ENST00000553427 TRAPPC3O43617 180 aa20.05■□□□□ 0.8
CPSF2-202ENST00000553427 RHOBTB3O94955 611 aa20.05■□□□□ 0.8
CPSF2-202ENST00000553427 IL18RAPO95256 599 aa20.05■□□□□ 0.8
CPSF2-202ENST00000553427 C1RP00736 705 aa20.05■□□□□ 0.8
CPSF2-202ENST00000553427 NDUFV1P49821 464 aa20.05■□□□□ 0.8
CPSF2-202ENST00000553427 CREMQ03060 361 aa20.05■□□□□ 0.8
CPSF2-202ENST00000553427 STK4Q13043 487 aa20.05■□□□□ 0.8
CPSF2-202ENST00000553427 ARMCX5Q6P1M9 558 aa20.05■□□□□ 0.8
CPSF2-202ENST00000553427 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.05■□□□□ 0.8
CPSF2-202ENST00000553427 HS2ST1Q7LGA3 356 aa20.05■□□□□ 0.8
CPSF2-202ENST00000553427 PPFIBP1Q86W92 1011 aa20.05■□□□□ 0.8
CPSF2-202ENST00000553427 NT5DC4Q86YG4 428 aa20.05■□□□□ 0.8
CPSF2-202ENST00000553427 C12orf56Q8IXR9 622 aa20.05■□□□□ 0.8
CPSF2-202ENST00000553427 ELOA2Q8IYF1 753 aaPredicted RBP20.05■□□□□ 0.8
CPSF2-202ENST00000553427 GOLGA5Q8TBA6 731 aa20.05■□□□□ 0.8
CPSF2-202ENST00000553427 AGPAT3Q9NRZ7 376 aa20.05■□□□□ 0.8
CPSF2-202ENST00000553427 TUBGCP4Q9UGJ1 667 aa20.05■□□□□ 0.8
CPSF2-202ENST00000553427 DLX2Q07687 328 aaPredicted RBP20.04■□□□□ 0.8
CPSF2-202ENST00000553427 KNOP1Q1ED39 458 aaKnown RBP20.04■□□□□ 0.8
CPSF2-202ENST00000553427 TPRNQ4KMQ1 711 aa20.04■□□□□ 0.8
CPSF2-202ENST00000553427 SPATA1Q5VX52 437 aa20.04■□□□□ 0.8
CPSF2-202ENST00000553427 KIAA1841Q6NSI8 718 aa20.04■□□□□ 0.8
CPSF2-202ENST00000553427 PDXDC1Q6P996 788 aa20.04■□□□□ 0.8
CPSF2-202ENST00000553427 C3orf58Q8NDZ4 430 aa20.04■□□□□ 0.8
CPSF2-202ENST00000553427 HASPINQ8TF76 798 aa20.04■□□□□ 0.8
CPSF2-202ENST00000553427 TMEM174Q8WUU8 243 aa20.04■□□□□ 0.8
CPSF2-202ENST00000553427 PIK3R5Q8WYR1 880 aa20.04■□□□□ 0.8
CPSF2-202ENST00000553427 CASP10Q92851 521 aa20.04■□□□□ 0.8
CPSF2-202ENST00000553427 FBXL18Q96ME1 805 aa20.04■□□□□ 0.8
CPSF2-202ENST00000553427 KLHL5Q96PQ7 755 aa20.04■□□□□ 0.8
CPSF2-202ENST00000553427 FAM213AQ9BRX8 229 aa20.04■□□□□ 0.8
CPSF2-202ENST00000553427 TTPALQ9BTX7 342 aa20.04■□□□□ 0.8
CPSF2-202ENST00000553427 KIAA1586Q9HCI6 787 aa20.04■□□□□ 0.8
CPSF2-202ENST00000553427 CLEC1BQ9P126 229 aa20.04■□□□□ 0.8
CPSF2-202ENST00000553427 FNIP2Q9P278 1114 aa20.04■□□□□ 0.8
CPSF2-202ENST00000553427 HCFC2Q9Y5Z7 792 aa20.04■□□□□ 0.8
CPSF2-202ENST00000553427 TTC28Q96AY4 2481 aa20.04■□□□□ 0.8
CPSF2-202ENST00000553427 NFICP08651 508 aa20.03■□□□□ 0.8
CPSF2-202ENST00000553427 CNPP09543 421 aaKnown RBP20.03■□□□□ 0.8
CPSF2-202ENST00000553427 FGFR3P22607 806 aa20.03■□□□□ 0.8
CPSF2-202ENST00000553427 PAX3P23760 479 aa20.03■□□□□ 0.8
CPSF2-202ENST00000553427 TMEM132DQ14C87 1099 aa20.03■□□□□ 0.8
CPSF2-202ENST00000553427 RTP2Q5QGT7 225 aa20.03■□□□□ 0.8
CPSF2-202ENST00000553427 FAM171A1Q5VUB5 890 aa20.03■□□□□ 0.8
CPSF2-202ENST00000553427 JADE1Q6IE81 842 aa20.03■□□□□ 0.8
CPSF2-202ENST00000553427 GPD1LQ8N335 351 aa20.03■□□□□ 0.8
CPSF2-202ENST00000553427 BEST2Q8NFU1 509 aa20.03■□□□□ 0.8
CPSF2-202ENST00000553427 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.03■□□□□ 0.8
CPSF2-202ENST00000553427 SLC22A17Q8WUG5 538 aa20.03■□□□□ 0.8
CPSF2-202ENST00000553427 SAAL1Q96ER3 474 aa20.03■□□□□ 0.8
CPSF2-202ENST00000553427 RBAKQ9NYW8 714 aaPredicted RBP20.03■□□□□ 0.8
CPSF2-202ENST00000553427 HSPBP1Q9NZL4 362 aa20.03■□□□□ 0.8
CPSF2-202ENST00000553427 VCANP13611 3396 aa20.03■□□□□ 0.8
CPSF2-202ENST00000553427 H3BQ06 376 aaPredicted RBP20.02■□□□□ 0.8
CPSF2-202ENST00000553427 ADH1AP07327 375 aa20.02■□□□□ 0.8
CPSF2-202ENST00000553427 BMP1P13497 986 aa20.02■□□□□ 0.8
CPSF2-202ENST00000553427 HOXB8P17481 243 aaPredicted RBP20.02■□□□□ 0.8
CPSF2-202ENST00000553427 CA8P35219 290 aa20.02■□□□□ 0.8
CPSF2-202ENST00000553427 SPAG1Q07617 926 aa20.02■□□□□ 0.8
CPSF2-202ENST00000553427 SMAD4Q13485 552 aaKnown RBP20.02■□□□□ 0.8
CPSF2-202ENST00000553427 CLEC17AQ6ZS10 378 aa20.02■□□□□ 0.8
CPSF2-202ENST00000553427 NELFCDQ8IXH7 590 aa20.02■□□□□ 0.8
CPSF2-202ENST00000553427 SMRP1Q8NCR6 262 aa20.02■□□□□ 0.8
CPSF2-202ENST00000553427 RIN2Q8WYP3 895 aaPredicted RBP20.02■□□□□ 0.8
CPSF2-202ENST00000553427 DZANK1Q9NVP4 752 aa20.02■□□□□ 0.8
CPSF2-202ENST00000553427 CD207Q9UJ71 328 aa20.02■□□□□ 0.8
CPSF2-202ENST00000553427 HOOK1Q9UJC3 728 aaKnown RBP20.02■□□□□ 0.8
CPSF2-202ENST00000553427 BARX2Q9UMQ3 279 aaPredicted RBP20.02■□□□□ 0.8
CPSF2-202ENST00000553427 FAM50BQ9Y247 325 aa20.02■□□□□ 0.8
CPSF2-202ENST00000553427 ANK1P16157 1881 aa20.01■□□□□ 0.79
CPSF2-202ENST00000553427 C2CD2LO14523 706 aa20.01■□□□□ 0.79
CPSF2-202ENST00000553427 SYN3O14994 580 aa20.01■□□□□ 0.79
CPSF2-202ENST00000553427 TEX28O15482 410 aa20.01■□□□□ 0.79
CPSF2-202ENST00000553427 KIF20AO95235 890 aa20.01■□□□□ 0.79
CPSF2-202ENST00000553427 IGFBP6P24592 240 aaPredicted RBP20.01■□□□□ 0.79
CPSF2-202ENST00000553427 AARSP49588 968 aaKnown RBP eCLIP20.01■□□□□ 0.79
CPSF2-202ENST00000553427 KCNQ1P51787 676 aa20.01■□□□□ 0.79
CPSF2-202ENST00000553427 CLCN4P51793 760 aa20.01■□□□□ 0.79
CPSF2-202ENST00000553427 ANKRD54Q6NXT1 300 aa20.01■□□□□ 0.79
CPSF2-202ENST00000553427 EP400NLQ6ZTU2 488 aa20.01■□□□□ 0.79
CPSF2-202ENST00000553427 EFCAB13Q8IY85 973 aa20.01■□□□□ 0.79
CPSF2-202ENST00000553427 ZSWIM2Q8NEG5 633 aa20.01■□□□□ 0.79
CPSF2-202ENST00000553427 SPATA20Q8TB22 786 aa20.01■□□□□ 0.79
CPSF2-202ENST00000553427 FAM212AQ96EL1 285 aa20.01■□□□□ 0.79
CPSF2-202ENST00000553427 SUSD3Q96L08 255 aa20.01■□□□□ 0.79
CPSF2-202ENST00000553427 B3GALT6Q96L58 329 aa20.01■□□□□ 0.79
CPSF2-202ENST00000553427 KCTD10Q9H3F6 313 aa20.01■□□□□ 0.79
CPSF2-202ENST00000553427 PCIF1Q9H4Z3 704 aa20.01■□□□□ 0.79
CPSF2-202ENST00000553427 ANO9A1A5B4 782 aa20■□□□□ 0.79
CPSF2-202ENST00000553427 GRXCR2A6NFK2 248 aa20■□□□□ 0.79
CPSF2-202ENST00000553427 ZNF233A6NK53 670 aa20■□□□□ 0.79
CPSF2-202ENST00000553427 KINO60870 393 aaKnown RBP20■□□□□ 0.79
CPSF2-202ENST00000553427 GADD45BO75293 160 aaPredicted RBP20■□□□□ 0.79
CPSF2-202ENST00000553427 KLRC2P26717 231 aa20■□□□□ 0.79
CPSF2-202ENST00000553427 UBE2HP62256 183 aa20■□□□□ 0.79
CPSF2-202ENST00000553427 RBM10P98175 930 aaKnown RBP20■□□□□ 0.79
CPSF2-202ENST00000553427 PTCRAQ6ISU1 281 aaPredicted RBP20■□□□□ 0.79
CPSF2-202ENST00000553427 SLC9A9Q8IVB4 645 aa20■□□□□ 0.79
CPSF2-202ENST00000553427 LNX1Q8TBB1 728 aaPredicted RBP20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms