RNA–Protein interactions for RNA: ENST00000551912.1

DDX54-209, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-209ENST00000551912 CCDC183Q5T5S1 534 aa20.22■□□□□ 0.83
DDX54-209ENST00000551912 KLHL10Q6JEL2 608 aa20.22■□□□□ 0.83
DDX54-209ENST00000551912 EFCAB13Q8IY85 973 aa20.22■□□□□ 0.83
DDX54-209ENST00000551912 HASPINQ8TF76 798 aa20.22■□□□□ 0.83
DDX54-209ENST00000551912 CACTINQ8WUQ7 758 aaKnown RBP20.22■□□□□ 0.83
DDX54-209ENST00000551912 LRPAP1P30533 357 aa20.21■□□□□ 0.83
DDX54-209ENST00000551912 CASP4P49662 377 aa20.21■□□□□ 0.83
DDX54-209ENST00000551912 PMS1P54277 932 aaKnown RBP20.21■□□□□ 0.83
DDX54-209ENST00000551912 TFAMQ00059 246 aaKnown RBP20.21■□□□□ 0.83
DDX54-209ENST00000551912 PSMD6Q15008 389 aa20.21■□□□□ 0.83
DDX54-209ENST00000551912 ANKRD40Q6AI12 368 aa20.21■□□□□ 0.83
DDX54-209ENST00000551912 RBM43Q6ZSC3 357 aaKnown RBP20.21■□□□□ 0.83
DDX54-209ENST00000551912 VPS52Q8N1B4 723 aa20.21■□□□□ 0.83
DDX54-209ENST00000551912 MLKLQ8NB16 471 aa20.21■□□□□ 0.83
DDX54-209ENST00000551912 MICAL1Q8TDZ2 1067 aa20.21■□□□□ 0.83
DDX54-209ENST00000551912 NELFBQ8WX92 580 aa20.21■□□□□ 0.83
DDX54-209ENST00000551912 MFSD14AQ96MC6 490 aa20.21■□□□□ 0.83
DDX54-209ENST00000551912 FNBP1Q96RU3 617 aa20.21■□□□□ 0.83
DDX54-209ENST00000551912 VN1R3Q9BXE9 311 aa20.21■□□□□ 0.83
DDX54-209ENST00000551912 CTNND2Q9UQB3 1225 aa20.21■□□□□ 0.83
DDX54-209ENST00000551912 BICDL2A1A5D9 508 aa20.2■□□□□ 0.82
DDX54-209ENST00000551912 TRIM49BA6NDI0 452 aa20.2■□□□□ 0.82
DDX54-209ENST00000551912 CETN3O15182 167 aa20.2■□□□□ 0.82
DDX54-209ENST00000551912 GUCY2FP51841 1108 aa20.2■□□□□ 0.82
DDX54-209ENST00000551912 ERVFC1P60507 584 aa20.2■□□□□ 0.82
DDX54-209ENST00000551912 PAK1Q13153 545 aa20.2■□□□□ 0.82
DDX54-209ENST00000551912 BMS1Q14692 1282 aaKnown RBP20.2■□□□□ 0.82
DDX54-209ENST00000551912 TIGD5Q53EQ6 642 aa20.2■□□□□ 0.82
DDX54-209ENST00000551912 PDE12Q6L8Q7 609 aaKnown RBP20.2■□□□□ 0.82
DDX54-209ENST00000551912 FUT10Q6P4F1 479 aa20.2■□□□□ 0.82
DDX54-209ENST00000551912 TMC7Q7Z402 723 aa20.2■□□□□ 0.82
DDX54-209ENST00000551912 WDR49Q8IV35 697 aa20.2■□□□□ 0.82
DDX54-209ENST00000551912 C3orf58Q8NDZ4 430 aa20.2■□□□□ 0.82
DDX54-209ENST00000551912 CCDC127Q96BQ5 260 aa20.2■□□□□ 0.82
DDX54-209ENST00000551912 TCF25Q9BQ70 676 aa20.2■□□□□ 0.82
DDX54-209ENST00000551912 NGRNQ9NPE2 291 aaKnown RBP20.2■□□□□ 0.82
DDX54-209ENST00000551912 ENTPD7Q9NQZ7 604 aa20.2■□□□□ 0.82
DDX54-209ENST00000551912 DPP3Q9NY33 737 aa20.2■□□□□ 0.82
DDX54-209ENST00000551912 SF3B1O75533 1304 aaKnown RBP eCLIP20.2■□□□□ 0.829e-6■■■■■ 68.9
DDX54-209ENST00000551912 PRRC2BQ5JSZ5 2229 aaKnown RBP20.19■□□□□ 0.82
DDX54-209ENST00000551912 FSCN2O14926 492 aa20.19■□□□□ 0.82
DDX54-209ENST00000551912 MAPK13O15264 365 aa20.19■□□□□ 0.82
DDX54-209ENST00000551912 AKAP3O75969 853 aa20.19■□□□□ 0.82
DDX54-209ENST00000551912 EFEMP2O95967 443 aa20.19■□□□□ 0.82
DDX54-209ENST00000551912 SOD2P04179 222 aa20.19■□□□□ 0.82
DDX54-209ENST00000551912 TMEM191BP0C7N4 346 aa20.19■□□□□ 0.82
DDX54-209ENST00000551912 DLATP10515 647 aaKnown RBP20.19■□□□□ 0.82
DDX54-209ENST00000551912 IRS1P35568 1242 aa20.19■□□□□ 0.82
DDX54-209ENST00000551912 PSMC2P35998 433 aaKnown RBP20.19■□□□□ 0.82
DDX54-209ENST00000551912 NLRP12P59046 1061 aa20.19■□□□□ 0.82
DDX54-209ENST00000551912 FKBP3Q00688 224 aaKnown RBP20.19■□□□□ 0.82
DDX54-209ENST00000551912 ELAVL2Q12926 359 aaKnown RBP20.19■□□□□ 0.82
DDX54-209ENST00000551912 FOXR2Q6PJQ5 311 aa20.19■□□□□ 0.82
DDX54-209ENST00000551912 RNF168Q8IYW5 571 aaPredicted RBP20.19■□□□□ 0.82
DDX54-209ENST00000551912 TMEM130Q8N3G9 435 aa20.19■□□□□ 0.82
DDX54-209ENST00000551912 SYAP1Q96A49 352 aaPredicted RBP20.19■□□□□ 0.82
DDX54-209ENST00000551912 ANKRD36BP1Q96IX9 119 aa20.19■□□□□ 0.82
DDX54-209ENST00000551912 HERC2P3Q9BVR0 1158 aa20.19■□□□□ 0.82
DDX54-209ENST00000551912 GPR62Q9BZJ7 368 aa20.19■□□□□ 0.82
DDX54-209ENST00000551912 ZBP1Q9H171 429 aa20.19■□□□□ 0.82
DDX54-209ENST00000551912 INTS13Q9NVM9 706 aa20.19■□□□□ 0.82
DDX54-209ENST00000551912 STXBP5LQ9Y2K9 1186 aa20.19■□□□□ 0.82
DDX54-209ENST00000551912 NUB1Q9Y5A7 615 aa20.19■□□□□ 0.82
DDX54-209ENST00000551912 TRAPPC3O43617 180 aa20.18■□□□□ 0.82
DDX54-209ENST00000551912 CTSAP10619 480 aa20.18■□□□□ 0.82
DDX54-209ENST00000551912 TNNI1P19237 187 aa20.18■□□□□ 0.82
DDX54-209ENST00000551912 IGFBP6P24592 240 aaPredicted RBP20.18■□□□□ 0.82
DDX54-209ENST00000551912 SMC1AQ14683 1233 aaKnown RBP20.18■□□□□ 0.82
DDX54-209ENST00000551912 DUOXA2Q1HG44 320 aa20.18■□□□□ 0.82
DDX54-209ENST00000551912 KLHL40Q2TBA0 621 aa20.18■□□□□ 0.82
DDX54-209ENST00000551912 PLPP4Q5VZY2 271 aa20.18■□□□□ 0.82
DDX54-209ENST00000551912 C9orf57Q5W0N0 161 aa20.18■□□□□ 0.82
DDX54-209ENST00000551912 LMBRD2Q68DH5 695 aaPredicted RBP20.18■□□□□ 0.82
DDX54-209ENST00000551912 TTI2Q6NXR4 508 aa20.18■□□□□ 0.82
DDX54-209ENST00000551912 CD300LGQ6UXG3 332 aa20.18■□□□□ 0.82
DDX54-209ENST00000551912 TAS1R1Q7RTX1 841 aa20.18■□□□□ 0.82
DDX54-209ENST00000551912 ZC3H3Q8IXZ2 948 aaKnown RBP20.18■□□□□ 0.82
DDX54-209ENST00000551912 FAM186BQ8IYM0 893 aa20.18■□□□□ 0.82
DDX54-209ENST00000551912 MICALL1Q8N3F8 863 aa20.18■□□□□ 0.82
DDX54-209ENST00000551912 EEF2KMTQ96G04 330 aa20.18■□□□□ 0.82
DDX54-209ENST00000551912 CGRRF1Q99675 332 aa20.18■□□□□ 0.82
DDX54-209ENST00000551912 MKNK1Q9BUB5 465 aa20.18■□□□□ 0.82
DDX54-209ENST00000551912 MTMR12Q9C0I1 747 aa20.18■□□□□ 0.82
DDX54-209ENST00000551912 NSUN3Q9H649 340 aaKnown RBP20.18■□□□□ 0.82
DDX54-209ENST00000551912 TMEM63CQ9P1W3 806 aa20.18■□□□□ 0.82
DDX54-209ENST00000551912 MYO7AQ13402 2215 aa20.18■□□□□ 0.82
DDX54-209ENST00000551912 ANO9A1A5B4 782 aa20.17■□□□□ 0.82
DDX54-209ENST00000551912 TNNC2P02585 160 aa20.17■□□□□ 0.82
DDX54-209ENST00000551912 EPB41P11171 864 aaKnown RBP20.17■□□□□ 0.82
DDX54-209ENST00000551912 USP41Q3LFD5 358 aa20.17■□□□□ 0.82
DDX54-209ENST00000551912 DPCR1Q3MIW9 517 aa20.17■□□□□ 0.82
DDX54-209ENST00000551912 KIAA1841Q6NSI8 718 aa20.17■□□□□ 0.82
DDX54-209ENST00000551912 CAVIN1Q6NZI2 390 aaKnown RBP20.17■□□□□ 0.82
DDX54-209ENST00000551912 INTS8Q75QN2 995 aaKnown RBP20.17■□□□□ 0.82
DDX54-209ENST00000551912 USP37Q86T82 979 aa20.17■□□□□ 0.82
DDX54-209ENST00000551912 C1orf127Q8N9H9 656 aa20.17■□□□□ 0.82
DDX54-209ENST00000551912 OR5B17Q8NGF7 314 aa20.17■□□□□ 0.82
DDX54-209ENST00000551912 PARD3BQ8TEW8 1205 aa20.17■□□□□ 0.82
DDX54-209ENST00000551912 PPP2R3CQ969Q6 453 aa20.17■□□□□ 0.82
DDX54-209ENST00000551912 POP1Q99575 1024 aaKnown RBP20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms