RNA–Protein interactions for RNA: ENST00000551845.5

PTCH1-225, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 809 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-225ENST00000551845 TRAPPC3O43617 180 aa11.53□□□□□ -0.56
PTCH1-225ENST00000551845 IL18RAPO95256 599 aa11.53□□□□□ -0.56
PTCH1-225ENST00000551845 SOD2P04179 222 aa11.53□□□□□ -0.56
PTCH1-225ENST00000551845 CTSAP10619 480 aa11.53□□□□□ -0.56
PTCH1-225ENST00000551845 CA8P35219 290 aa11.53□□□□□ -0.56
PTCH1-225ENST00000551845 CLCNKBP51801 687 aa11.53□□□□□ -0.56
PTCH1-225ENST00000551845 SPAG1Q07617 926 aa11.53□□□□□ -0.56
PTCH1-225ENST00000551845 ELAVL2Q12926 359 aaKnown RBP11.53□□□□□ -0.56
PTCH1-225ENST00000551845 SMC1AQ14683 1233 aaKnown RBP11.53□□□□□ -0.56
PTCH1-225ENST00000551845 SURF1Q15526 300 aa11.53□□□□□ -0.56
PTCH1-225ENST00000551845 ZBTB6Q15916 424 aa11.53□□□□□ -0.56
PTCH1-225ENST00000551845 UPP1Q16831 310 aa11.53□□□□□ -0.56
PTCH1-225ENST00000551845 TCEAL5Q5H9L2 206 aa11.53□□□□□ -0.56
PTCH1-225ENST00000551845 CRELD2Q6UXH1 353 aaPredicted RBP11.53□□□□□ -0.56
PTCH1-225ENST00000551845 EP400NLQ6ZTU2 488 aa11.53□□□□□ -0.56
PTCH1-225ENST00000551845 RBM23Q86U06 439 aaKnown RBP11.53□□□□□ -0.56
PTCH1-225ENST00000551845 NT5DC4Q86YG4 428 aa11.53□□□□□ -0.56
PTCH1-225ENST00000551845 BEST2Q8NFU1 509 aa11.53□□□□□ -0.56
PTCH1-225ENST00000551845 SPDYE1Q8NFV5 336 aaPredicted RBP11.53□□□□□ -0.56
PTCH1-225ENST00000551845 CACTINQ8WUQ7 758 aaKnown RBP11.53□□□□□ -0.56
PTCH1-225ENST00000551845 PAAF1Q9BRP4 392 aa11.53□□□□□ -0.56
PTCH1-225ENST00000551845 IGFLR1Q9H665 355 aa11.53□□□□□ -0.56
PTCH1-225ENST00000551845 TLE6Q9H808 572 aa11.53□□□□□ -0.56
PTCH1-225ENST00000551845 MRPL17Q9NRX2 175 aaKnown RBP11.53□□□□□ -0.56
PTCH1-225ENST00000551845 AGPAT3Q9NRZ7 376 aa11.53□□□□□ -0.56
PTCH1-225ENST00000551845 MARCH5Q9NX47 278 aa11.53□□□□□ -0.56
PTCH1-225ENST00000551845 HSPBP1Q9NZL4 362 aa11.53□□□□□ -0.56
PTCH1-225ENST00000551845 DERAQ9Y315 318 aa11.53□□□□□ -0.56
PTCH1-225ENST00000551845 NUB1Q9Y5A7 615 aa11.53□□□□□ -0.56
PTCH1-225ENST00000551845 PIEZO1Q92508 2521 aa11.52□□□□□ -0.56
PTCH1-225ENST00000551845 PODXLO00592 558 aa11.52□□□□□ -0.57
PTCH1-225ENST00000551845 PER2O15055 1255 aa11.52□□□□□ -0.57
PTCH1-225ENST00000551845 MEFVO15553 781 aaPredicted RBP11.52□□□□□ -0.57
PTCH1-225ENST00000551845 CALUO43852 315 aaPredicted RBP11.52□□□□□ -0.57
PTCH1-225ENST00000551845 EXOC3O60645 756 aa11.52□□□□□ -0.57
PTCH1-225ENST00000551845 SOX4Q06945 474 aaPredicted RBP11.52□□□□□ -0.57
PTCH1-225ENST00000551845 USP41Q3LFD5 358 aa11.52□□□□□ -0.57
PTCH1-225ENST00000551845 ZNF658Q5TYW1 1059 aaPredicted RBP11.52□□□□□ -0.57
PTCH1-225ENST00000551845 SPATA1Q5VX52 437 aa11.52□□□□□ -0.57
PTCH1-225ENST00000551845 PLPP4Q5VZY2 271 aa11.52□□□□□ -0.57
PTCH1-225ENST00000551845 JADE1Q6IE81 842 aa11.52□□□□□ -0.57
PTCH1-225ENST00000551845 FUT10Q6P4F1 479 aa11.52□□□□□ -0.57
PTCH1-225ENST00000551845 GUF1Q8N442 669 aaKnown RBP11.52□□□□□ -0.57
PTCH1-225ENST00000551845 XXYLT1Q8NBI6 393 aa11.52□□□□□ -0.57
PTCH1-225ENST00000551845 RDH13Q8NBN7 331 aa11.52□□□□□ -0.57
PTCH1-225ENST00000551845 SPATA20Q8TB22 786 aa11.52□□□□□ -0.57
PTCH1-225ENST00000551845 BCL7CQ8WUZ0 217 aaPredicted RBP11.52□□□□□ -0.57
PTCH1-225ENST00000551845 ERCC4Q92889 916 aaPredicted RBP11.52□□□□□ -0.57
PTCH1-225ENST00000551845 C18orf25Q96B23 403 aaPredicted RBP11.52□□□□□ -0.57
PTCH1-225ENST00000551845 MFSD14AQ96MC6 490 aa11.52□□□□□ -0.57
PTCH1-225ENST00000551845 CDCA3Q99618 268 aaPredicted RBP11.52□□□□□ -0.57
PTCH1-225ENST00000551845 EMILIN2Q9BXX0 1053 aa11.52□□□□□ -0.57
PTCH1-225ENST00000551845 GOLGA2P5Q9HBQ8 144 aa11.52□□□□□ -0.57
PTCH1-225ENST00000551845 RBAKQ9NYW8 714 aaPredicted RBP11.52□□□□□ -0.57
PTCH1-225ENST00000551845 MAPK8IP1Q9UQF2 711 aa11.52□□□□□ -0.57
PTCH1-225ENST00000551845 FAM50BQ9Y247 325 aa11.52□□□□□ -0.57
PTCH1-225ENST00000551845 C2CD2Q9Y426 696 aa11.52□□□□□ -0.57
PTCH1-225ENST00000551845 IRAK3Q9Y616 596 aa11.52□□□□□ -0.57
PTCH1-225ENST00000551845 FSD2A1L4K1 749 aa11.51□□□□□ -0.57
PTCH1-225ENST00000551845 C2orf71A6NGG8 1288 aa11.51□□□□□ -0.57
PTCH1-225ENST00000551845 H3BQ06 376 aaPredicted RBP11.51□□□□□ -0.57
PTCH1-225ENST00000551845 TMEM189-UBE2V1I3L0A0 370 aa11.51□□□□□ -0.57
PTCH1-225ENST00000551845 URODP06132 367 aa11.51□□□□□ -0.57
PTCH1-225ENST00000551845 RPL13P26373 211 aaKnown RBP11.51□□□□□ -0.57
PTCH1-225ENST00000551845 LRPAP1P30533 357 aa11.51□□□□□ -0.57
PTCH1-225ENST00000551845 NRIP1P48552 1158 aa11.51□□□□□ -0.57
PTCH1-225ENST00000551845 CYP2J2P51589 502 aa11.51□□□□□ -0.57
PTCH1-225ENST00000551845 MYBPC2Q14324 1141 aa11.51□□□□□ -0.57
PTCH1-225ENST00000551845 TMEM132DQ14C87 1099 aa11.51□□□□□ -0.57
PTCH1-225ENST00000551845 FAM171A1Q5VUB5 890 aa11.51□□□□□ -0.57
PTCH1-225ENST00000551845 TAS1R1Q7RTX1 841 aa11.51□□□□□ -0.57
PTCH1-225ENST00000551845 CEP57Q86XR8 500 aa11.51□□□□□ -0.57
PTCH1-225ENST00000551845 BRSK2Q8IWQ3 736 aa11.51□□□□□ -0.57
PTCH1-225ENST00000551845 C12orf56Q8IXR9 622 aa11.51□□□□□ -0.57
PTCH1-225ENST00000551845 GPR65Q8IYL9 337 aa11.51□□□□□ -0.57
PTCH1-225ENST00000551845 ZSWIM2Q8NEG5 633 aa11.51□□□□□ -0.57
PTCH1-225ENST00000551845 HASPINQ8TF76 798 aa11.51□□□□□ -0.57
PTCH1-225ENST00000551845 GPR62Q9BZJ7 368 aa11.51□□□□□ -0.57
PTCH1-225ENST00000551845 ZBP1Q9H171 429 aa11.51□□□□□ -0.57
PTCH1-225ENST00000551845 KCTD10Q9H3F6 313 aa11.51□□□□□ -0.57
PTCH1-225ENST00000551845 CHST7Q9NS84 486 aa11.51□□□□□ -0.57
PTCH1-225ENST00000551845 LMBRD1Q9NUN5 540 aa11.51□□□□□ -0.57
PTCH1-225ENST00000551845 CACNG4Q9UBN1 327 aa11.51□□□□□ -0.57
PTCH1-225ENST00000551845 TRAF3IP3Q9Y228 551 aa11.51□□□□□ -0.57
PTCH1-225ENST00000551845 R3HCC1Q9Y3T6 440 aaKnown RBP11.51□□□□□ -0.57
PTCH1-225ENST00000551845 SF3B1O75533 1304 aaKnown RBP eCLIP11.51□□□□□ -0.574e-7■■■■■ 133.7
PTCH1-225ENST00000551845 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.5□□□□□ -0.57
PTCH1-225ENST00000551845 HIDE1A8MVS5 230 aa11.5□□□□□ -0.57
PTCH1-225ENST00000551845 F8W810 466 aa11.5□□□□□ -0.57
PTCH1-225ENST00000551845 C2CD2LO14523 706 aa11.5□□□□□ -0.57
PTCH1-225ENST00000551845 KIF4AO95239 1232 aa11.5□□□□□ -0.57
PTCH1-225ENST00000551845 EFEMP2O95967 443 aa11.5□□□□□ -0.57
PTCH1-225ENST00000551845 PAX3P23760 479 aa11.5□□□□□ -0.57
PTCH1-225ENST00000551845 KLRC2P26717 231 aa11.5□□□□□ -0.57
PTCH1-225ENST00000551845 PPP1R2P41236 205 aa11.5□□□□□ -0.57
PTCH1-225ENST00000551845 GLUD2P49448 558 aa11.5□□□□□ -0.57
PTCH1-225ENST00000551845 TFAMQ00059 246 aaKnown RBP11.5□□□□□ -0.57
PTCH1-225ENST00000551845 DSG1Q02413 1049 aa11.5□□□□□ -0.57
PTCH1-225ENST00000551845 HYAL1Q12794 435 aa11.5□□□□□ -0.57
PTCH1-225ENST00000551845 ADAM15Q13444 863 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms