RNA–Protein interactions for RNA: ENST00000551391.1

SCAF11-215, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-215ENST00000551391 NOGQ13253 232 aa4.47□□□□□ -1.69
SCAF11-215ENST00000551391 HLTFQ14527 1009 aaKnown RBP eCLIP4.47□□□□□ -1.69
SCAF11-215ENST00000551391 VPS72Q15906 364 aa4.47□□□□□ -1.69
SCAF11-215ENST00000551391 CSRP2Q16527 193 aa4.47□□□□□ -1.69
SCAF11-215ENST00000551391 KHDC1Q4VXA5 237 aaKnown RBP4.47□□□□□ -1.69
SCAF11-215ENST00000551391 C1QL3Q5VWW1 255 aa4.47□□□□□ -1.69
SCAF11-215ENST00000551391 IGFL4Q6B9Z1 124 aa4.47□□□□□ -1.69
SCAF11-215ENST00000551391 EFCAB12Q6NXP0 572 aa4.47□□□□□ -1.69
SCAF11-215ENST00000551391 GADL1Q6ZQY3 521 aa4.47□□□□□ -1.69
SCAF11-215ENST00000551391 XYLT1Q86Y38 959 aa4.47□□□□□ -1.69
SCAF11-215ENST00000551391 DENND1CQ8IV53 801 aa4.47□□□□□ -1.69
SCAF11-215ENST00000551391 WDR75Q8IWA0 830 aaKnown RBP4.47□□□□□ -1.69
SCAF11-215ENST00000551391 IL17RDQ8NFM7 739 aa4.47□□□□□ -1.69
SCAF11-215ENST00000551391 FBXO18Q8NFZ0 1043 aa4.47□□□□□ -1.69
SCAF11-215ENST00000551391 NLGN4YQ8NFZ3 816 aaPredicted RBP4.47□□□□□ -1.69
SCAF11-215ENST00000551391 ATXN2LQ8WWM7 1075 aaKnown RBP4.47□□□□□ -1.69
SCAF11-215ENST00000551391 NEU4Q8WWR8 484 aaPredicted RBP4.47□□□□□ -1.69
SCAF11-215ENST00000551391 TFAP2CQ92754 450 aa4.47□□□□□ -1.69
SCAF11-215ENST00000551391 CDK5RAP3Q96JB5 506 aa4.47□□□□□ -1.69
SCAF11-215ENST00000551391 MNTQ99583 582 aa4.47□□□□□ -1.69
SCAF11-215ENST00000551391 ACO2Q99798 780 aaKnown RBP4.47□□□□□ -1.69
SCAF11-215ENST00000551391 CPEB1Q9BZB8 566 aaKnown RBP4.47□□□□□ -1.69
SCAF11-215ENST00000551391 C11orf54Q9H0W9 315 aaPredicted RBP4.47□□□□□ -1.69
SCAF11-215ENST00000551391 PRDM11Q9NQV5 511 aa4.47□□□□□ -1.69
SCAF11-215ENST00000551391 AURKAIP1Q9NWT8 199 aaPredicted RBP4.47□□□□□ -1.69
SCAF11-215ENST00000551391 XDHP47989 1333 aa4.46□□□□□ -1.69
SCAF11-215ENST00000551391 KLRG2A4D1S0 409 aaPredicted RBP4.46□□□□□ -1.7
SCAF11-215ENST00000551391 NT5C1B-RDH14C9J2C7 533 aa4.46□□□□□ -1.7
SCAF11-215ENST00000551391 TUSC2O75896 110 aa4.46□□□□□ -1.7
SCAF11-215ENST00000551391 POMCP01189 267 aa4.46□□□□□ -1.7
SCAF11-215ENST00000551391 FTLP02792 175 aaPredicted RBP4.46□□□□□ -1.7
SCAF11-215ENST00000551391 ALDH2P05091 517 aa4.46□□□□□ -1.7
SCAF11-215ENST00000551391 MTHFD1P11586 935 aaKnown RBP4.46□□□□□ -1.7
SCAF11-215ENST00000551391 ATF3P18847 181 aa4.46□□□□□ -1.7
SCAF11-215ENST00000551391 HIBADHP31937 336 aaKnown RBP4.46□□□□□ -1.7
SCAF11-215ENST00000551391 MAN2A2P49641 1150 aa4.46□□□□□ -1.7
SCAF11-215ENST00000551391 ZNF280AP59817 542 aaPredicted RBP4.46□□□□□ -1.7
SCAF11-215ENST00000551391 CREMQ03060 361 aa4.46□□□□□ -1.7
SCAF11-215ENST00000551391 SNAPC2Q13487 334 aa4.46□□□□□ -1.7
SCAF11-215ENST00000551391 GBX1Q14549 363 aa4.46□□□□□ -1.7
SCAF11-215ENST00000551391 PABPC1LQ4VXU2 614 aaKnown RBP4.46□□□□□ -1.7
SCAF11-215ENST00000551391 ATXN7L2Q5T6C5 722 aaPredicted RBP4.46□□□□□ -1.7
SCAF11-215ENST00000551391 ZNF575Q86XF7 245 aa4.46□□□□□ -1.7
SCAF11-215ENST00000551391 DCBLD1Q8N8Z6 715 aa4.46□□□□□ -1.7
SCAF11-215ENST00000551391 CGRRF1Q99675 332 aa4.46□□□□□ -1.7
SCAF11-215ENST00000551391 VRK1Q99986 396 aaPredicted RBP4.46□□□□□ -1.7
SCAF11-215ENST00000551391 NDC1Q9BTX1 674 aa4.46□□□□□ -1.7
SCAF11-215ENST00000551391 WDCPQ9H6R7 721 aa4.46□□□□□ -1.7
SCAF11-215ENST00000551391 OBP2AQ9NY56 170 aa4.46□□□□□ -1.7
SCAF11-215ENST00000551391 GABBR1Q9UBS5 961 aa4.46□□□□□ -1.7
SCAF11-215ENST00000551391 STXBP5LQ9Y2K9 1186 aa4.46□□□□□ -1.7
SCAF11-215ENST00000551391 A0A088AWK7 358 aa4.45□□□□□ -1.7
SCAF11-215ENST00000551391 VSTM5A8MXK1 200 aa4.45□□□□□ -1.7
SCAF11-215ENST00000551391 UBXN7O94888 489 aa4.45□□□□□ -1.7
SCAF11-215ENST00000551391 HRGP04196 525 aa4.45□□□□□ -1.7
SCAF11-215ENST00000551391 ADH4P08319 380 aa4.45□□□□□ -1.7
SCAF11-215ENST00000551391 ALAS1P13196 640 aa4.45□□□□□ -1.7
SCAF11-215ENST00000551391 ACRV1P26436 265 aa4.45□□□□□ -1.7
SCAF11-215ENST00000551391 AGFG1P52594 562 aaKnown RBP4.45□□□□□ -1.7
SCAF11-215ENST00000551391 NKX6-1P78426 367 aaPredicted RBP4.45□□□□□ -1.7
SCAF11-215ENST00000551391 UBXN2BQ14CS0 331 aa4.45□□□□□ -1.7
SCAF11-215ENST00000551391 ARHGAP29Q52LW3 1261 aa4.45□□□□□ -1.7
SCAF11-215ENST00000551391 ZNF529Q6P280 563 aa4.45□□□□□ -1.7
SCAF11-215ENST00000551391 CHST15Q7LFX5 561 aaPredicted RBP4.45□□□□□ -1.7
SCAF11-215ENST00000551391 HEATR3Q7Z4Q2 680 aa4.45□□□□□ -1.7
SCAF11-215ENST00000551391 DGKHQ86XP1 1220 aa4.45□□□□□ -1.7
SCAF11-215ENST00000551391 DNAJC10Q8IXB1 793 aa4.45□□□□□ -1.7
SCAF11-215ENST00000551391 CAMKK1Q8N5S9 505 aa4.45□□□□□ -1.7
SCAF11-215ENST00000551391 RAB24Q969Q5 203 aa4.45□□□□□ -1.7
SCAF11-215ENST00000551391 MYOCQ99972 504 aa4.45□□□□□ -1.7
SCAF11-215ENST00000551391 GPR87Q9BY21 358 aa4.45□□□□□ -1.7
SCAF11-215ENST00000551391 TMEM60Q9H2L4 133 aa4.45□□□□□ -1.7
SCAF11-215ENST00000551391 SPON1Q9HCB6 807 aa4.45□□□□□ -1.7
SCAF11-215ENST00000551391 LMBRD1Q9NUN5 540 aa4.45□□□□□ -1.7
SCAF11-215ENST00000551391 GNL3LQ9NVN8 582 aaKnown RBP4.45□□□□□ -1.7
SCAF11-215ENST00000551391 LRRC14BA6NHZ5 514 aa4.44□□□□□ -1.7
SCAF11-215ENST00000551391 DRGXA6NNA5 263 aa4.44□□□□□ -1.7
SCAF11-215ENST00000551391 DIRC3C9JPN6 131 aa4.44□□□□□ -1.7
SCAF11-215ENST00000551391 F2RL2O00254 374 aa4.44□□□□□ -1.7
SCAF11-215ENST00000551391 PLSCR1O15162 318 aa4.44□□□□□ -1.7
SCAF11-215ENST00000551391 GRM6O15303 877 aa4.44□□□□□ -1.7
SCAF11-215ENST00000551391 B3GALT2O43825 422 aa4.44□□□□□ -1.7
SCAF11-215ENST00000551391 SLC43A1O75387 559 aa4.44□□□□□ -1.7
SCAF11-215ENST00000551391 C1SP09871 688 aa4.44□□□□□ -1.7
SCAF11-215ENST00000551391 TYRP14679 529 aa4.44□□□□□ -1.7
SCAF11-215ENST00000551391 HK1P19367 917 aa4.44□□□□□ -1.7
SCAF11-215ENST00000551391 TGM1P22735 817 aa4.44□□□□□ -1.7
SCAF11-215ENST00000551391 SMARCA1P28370 1054 aa4.44□□□□□ -1.7
SCAF11-215ENST00000551391 PRDX5P30044 214 aa4.44□□□□□ -1.7
SCAF11-215ENST00000551391 SCNN1GP51170 649 aa4.44□□□□□ -1.7
SCAF11-215ENST00000551391 TUBA3CQ13748 450 aa4.44□□□□□ -1.7
SCAF11-215ENST00000551391 RRP1BQ14684 758 aaKnown RBP4.44□□□□□ -1.7
SCAF11-215ENST00000551391 ANO6Q4KMQ2 910 aa4.44□□□□□ -1.7
SCAF11-215ENST00000551391 FLYWCH1Q4VC44 716 aa4.44□□□□□ -1.7
SCAF11-215ENST00000551391 METRNLQ641Q3 311 aa4.44□□□□□ -1.7
SCAF11-215ENST00000551391 CYB5RLQ6IPT4 315 aa4.44□□□□□ -1.7
SCAF11-215ENST00000551391 TUBA3EQ6PEY2 450 aa4.44□□□□□ -1.7
SCAF11-215ENST00000551391 SLC4A10Q6U841 1118 aa4.44□□□□□ -1.7
SCAF11-215ENST00000551391 Q6ZRM9 215 aa4.44□□□□□ -1.7
SCAF11-215ENST00000551391 OVCH2Q7RTZ1 564 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms