RNA–Protein interactions for RNA: ENST00000551063.5

PRPF40B-211, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 4

Gene PRPF40B, Length 531 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-211ENST00000551063 IKZF4Q9H2S9 585 aa16.77■□□□□ 0.28
PRPF40B-211ENST00000551063 GOLPH3LQ9H4A5 285 aa16.77■□□□□ 0.28
PRPF40B-211ENST00000551063 ASB7Q9H672 318 aa16.77■□□□□ 0.28
PRPF40B-211ENST00000551063 CD320Q9NPF0 282 aa16.77■□□□□ 0.28
PRPF40B-211ENST00000551063 DZANK1Q9NVP4 752 aa16.77■□□□□ 0.28
PRPF40B-211ENST00000551063 DERAQ9Y315 318 aa16.77■□□□□ 0.28
PRPF40B-211ENST00000551063 GOLGA6L4A6NEF3 574 aa16.76■□□□□ 0.27
PRPF40B-211ENST00000551063 LACTBL1A8MY62 500 aa16.76■□□□□ 0.27
PRPF40B-211ENST00000551063 C2CD2LO14523 706 aa16.76■□□□□ 0.27
PRPF40B-211ENST00000551063 TRAPPC3O43617 180 aa16.76■□□□□ 0.27
PRPF40B-211ENST00000551063 KLRC4O43908 158 aa16.76■□□□□ 0.27
PRPF40B-211ENST00000551063 LDHAP00338 332 aaKnown RBP16.76■□□□□ 0.27
PRPF40B-211ENST00000551063 C1RP00736 705 aa16.76■□□□□ 0.27
PRPF40B-211ENST00000551063 ADH1AP07327 375 aa16.76■□□□□ 0.27
PRPF40B-211ENST00000551063 LRPAP1P30533 357 aa16.76■□□□□ 0.27
PRPF40B-211ENST00000551063 ZBTB6Q15916 424 aa16.76■□□□□ 0.27
PRPF40B-211ENST00000551063 BMT2Q1RMZ1 405 aa16.76■□□□□ 0.27
PRPF40B-211ENST00000551063 RTP2Q5QGT7 225 aa16.76■□□□□ 0.27
PRPF40B-211ENST00000551063 FAM171A1Q5VUB5 890 aa16.76■□□□□ 0.27
PRPF40B-211ENST00000551063 ANKRD54Q6NXT1 300 aa16.76■□□□□ 0.27
PRPF40B-211ENST00000551063 CD300LGQ6UXG3 332 aa16.76■□□□□ 0.27
PRPF40B-211ENST00000551063 KRBA2Q6ZNG9 492 aa16.76■□□□□ 0.27
PRPF40B-211ENST00000551063 C3orf58Q8NDZ4 430 aa16.76■□□□□ 0.27
PRPF40B-211ENST00000551063 GLIS3Q8NEA6 775 aa16.76■□□□□ 0.27
PRPF40B-211ENST00000551063 ZNF507Q8TCN5 953 aa16.76■□□□□ 0.27
PRPF40B-211ENST00000551063 PIK3R5Q8WYR1 880 aa16.76■□□□□ 0.27
PRPF40B-211ENST00000551063 C18orf25Q96B23 403 aaPredicted RBP16.76■□□□□ 0.27
PRPF40B-211ENST00000551063 TTPALQ9BTX7 342 aa16.76■□□□□ 0.27
PRPF40B-211ENST00000551063 EXOC1Q9NV70 894 aa16.76■□□□□ 0.27
PRPF40B-211ENST00000551063 FNIP2Q9P278 1114 aa16.76■□□□□ 0.27
PRPF40B-211ENST00000551063 PRKAG3Q9UGI9 489 aa16.76■□□□□ 0.27
PRPF40B-211ENST00000551063 TUBGCP4Q9UGJ1 667 aa16.76■□□□□ 0.27
PRPF40B-211ENST00000551063 RAPGEFL1Q9UHV5 662 aa16.76■□□□□ 0.27
PRPF40B-211ENST00000551063 C2CD2Q9Y426 696 aa16.76■□□□□ 0.27
PRPF40B-211ENST00000551063 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.75■□□□□ 0.27
PRPF40B-211ENST00000551063 TEX28O15482 410 aa16.75■□□□□ 0.27
PRPF40B-211ENST00000551063 MBTPS2O43462 519 aa16.75■□□□□ 0.27
PRPF40B-211ENST00000551063 FGFR3P22607 806 aa16.75■□□□□ 0.27
PRPF40B-211ENST00000551063 KLRC2P26717 231 aa16.75■□□□□ 0.27
PRPF40B-211ENST00000551063 ACOT2P49753 483 aa16.75■□□□□ 0.27
PRPF40B-211ENST00000551063 SNRPFP62306 86 aaKnown RBP16.75■□□□□ 0.27
PRPF40B-211ENST00000551063 RBM10P98175 930 aaKnown RBP16.75■□□□□ 0.27
PRPF40B-211ENST00000551063 LLGL2Q6P1M3 1020 aa16.75■□□□□ 0.27
PRPF40B-211ENST00000551063 ARMCX5Q6P1M9 558 aa16.75■□□□□ 0.27
PRPF40B-211ENST00000551063 CRELD2Q6UXH1 353 aaPredicted RBP16.75■□□□□ 0.27
PRPF40B-211ENST00000551063 NT5DC4Q86YG4 428 aa16.75■□□□□ 0.27
PRPF40B-211ENST00000551063 BRSK2Q8IWQ3 736 aa16.75■□□□□ 0.27
PRPF40B-211ENST00000551063 SLC22A17Q8WUG5 538 aa16.75■□□□□ 0.27
PRPF40B-211ENST00000551063 SCFD1Q8WVM8 642 aa16.75■□□□□ 0.27
PRPF40B-211ENST00000551063 RIN2Q8WYP3 895 aaPredicted RBP16.75■□□□□ 0.27
PRPF40B-211ENST00000551063 CBWD1Q9BRT8 395 aa16.75■□□□□ 0.27
PRPF40B-211ENST00000551063 NUB1Q9Y5A7 615 aa16.75■□□□□ 0.27
PRPF40B-211ENST00000551063 SYN3O14994 580 aa16.74■□□□□ 0.27
PRPF40B-211ENST00000551063 EXTL3O43909 919 aa16.74■□□□□ 0.27
PRPF40B-211ENST00000551063 ZNF202O95125 648 aa16.74■□□□□ 0.27
PRPF40B-211ENST00000551063 IL18RAPO95256 599 aa16.74■□□□□ 0.27
PRPF40B-211ENST00000551063 ALADP13716 330 aa16.74■□□□□ 0.27
PRPF40B-211ENST00000551063 EPCAMP16422 314 aa16.74■□□□□ 0.27
PRPF40B-211ENST00000551063 HOXD13P35453 343 aa16.74■□□□□ 0.27
PRPF40B-211ENST00000551063 CLCN4P51793 760 aa16.74■□□□□ 0.27
PRPF40B-211ENST00000551063 SPAG1Q07617 926 aa16.74■□□□□ 0.27
PRPF40B-211ENST00000551063 PSMD2Q13200 908 aa16.74■□□□□ 0.27
PRPF40B-211ENST00000551063 SMAD2Q15796 467 aaKnown RBP16.74■□□□□ 0.27
PRPF40B-211ENST00000551063 CLUL1Q15846 466 aa16.74■□□□□ 0.27
PRPF40B-211ENST00000551063 TPRNQ4KMQ1 711 aa16.74■□□□□ 0.27
PRPF40B-211ENST00000551063 SPATA1Q5VX52 437 aa16.74■□□□□ 0.27
PRPF40B-211ENST00000551063 JADE1Q6IE81 842 aa16.74■□□□□ 0.27
PRPF40B-211ENST00000551063 KANK3Q6NY19 840 aa16.74■□□□□ 0.27
PRPF40B-211ENST00000551063 HS2ST1Q7LGA3 356 aa16.74■□□□□ 0.27
PRPF40B-211ENST00000551063 BEST2Q8NFU1 509 aa16.74■□□□□ 0.27
PRPF40B-211ENST00000551063 KHSRPQ92945 711 aaKnown RBP eCLIP16.74■□□□□ 0.27
PRPF40B-211ENST00000551063 B3GALT6Q96L58 329 aa16.74■□□□□ 0.27
PRPF40B-211ENST00000551063 CHMP5Q9NZZ3 219 aa16.74■□□□□ 0.27
PRPF40B-211ENST00000551063 HCN4Q9Y3Q4 1203 aa16.74■□□□□ 0.27
PRPF40B-211ENST00000551063 ARIH1Q9Y4X5 557 aaPredicted RBP16.74■□□□□ 0.27
PRPF40B-211ENST00000551063 GLUD1P00367 558 aa16.73■□□□□ 0.27
PRPF40B-211ENST00000551063 NFICP08651 508 aa16.73■□□□□ 0.27
PRPF40B-211ENST00000551063 DPYDQ12882 1025 aa16.73■□□□□ 0.27
PRPF40B-211ENST00000551063 TMEM132DQ14C87 1099 aa16.73■□□□□ 0.27
PRPF40B-211ENST00000551063 PSMD5Q16401 504 aa16.73■□□□□ 0.27
PRPF40B-211ENST00000551063 KMT5BQ4FZB7 885 aa16.73■□□□□ 0.27
PRPF40B-211ENST00000551063 SYCE2Q6PIF2 218 aa16.73■□□□□ 0.27
PRPF40B-211ENST00000551063 ELMSAN1Q6PJG2 1045 aa16.73■□□□□ 0.27
PRPF40B-211ENST00000551063 GPD1LQ8N335 351 aa16.73■□□□□ 0.27
PRPF40B-211ENST00000551063 LNX1Q8TBB1 728 aaPredicted RBP16.73■□□□□ 0.27
PRPF40B-211ENST00000551063 CCDC47Q96A33 483 aaKnown RBP16.73■□□□□ 0.27
PRPF40B-211ENST00000551063 FAM122AQ96E09 287 aa16.73■□□□□ 0.27
PRPF40B-211ENST00000551063 FAM212AQ96EL1 285 aa16.73■□□□□ 0.27
PRPF40B-211ENST00000551063 SAAL1Q96ER3 474 aa16.73■□□□□ 0.27
PRPF40B-211ENST00000551063 FBXL18Q96ME1 805 aa16.73■□□□□ 0.27
PRPF40B-211ENST00000551063 FAM213AQ9BRX8 229 aa16.73■□□□□ 0.27
PRPF40B-211ENST00000551063 SLC39A2Q9NP94 309 aa16.73■□□□□ 0.27
PRPF40B-211ENST00000551063 AGPAT3Q9NRZ7 376 aa16.73■□□□□ 0.27
PRPF40B-211ENST00000551063 CGNQ9P2M7 1197 aaKnown RBP16.73■□□□□ 0.27
PRPF40B-211ENST00000551063 DPP7Q9UHL4 492 aa16.73■□□□□ 0.27
PRPF40B-211ENST00000551063 USP15Q9Y4E8 981 aaPredicted RBP16.73■□□□□ 0.27
PRPF40B-211ENST00000551063 CITO14578 2027 aa16.72■□□□□ 0.27
PRPF40B-211ENST00000551063 RPN1P04843 607 aaKnown RBP16.72■□□□□ 0.27
PRPF40B-211ENST00000551063 PAX3P23760 479 aa16.72■□□□□ 0.27
PRPF40B-211ENST00000551063 IGFBP6P24592 240 aaPredicted RBP16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms