RNA–Protein interactions for RNA: ENST00000550841.1

NEK3-202, Transcript of NIMA related kinase 3, humanhuman

TSL 4

Gene NEK3, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-202ENST00000550841 TFAMQ00059 246 aaKnown RBP23.21■■□□□ 1.31
NEK3-202ENST00000550841 GRIN2CQ14957 1233 aa23.21■■□□□ 1.31
NEK3-202ENST00000550841 SLC39A11Q8N1S5 342 aa23.21■■□□□ 1.31
NEK3-202ENST00000550841 PARD3BQ8TEW8 1205 aa23.21■■□□□ 1.31
NEK3-202ENST00000550841 ARNTL2Q8WYA1 636 aa23.21■■□□□ 1.31
NEK3-202ENST00000550841 C18orf25Q96B23 403 aaPredicted RBP23.21■■□□□ 1.31
NEK3-202ENST00000550841 TMEM169Q96HH4 297 aa23.21■■□□□ 1.31
NEK3-202ENST00000550841 CGRRF1Q99675 332 aa23.21■■□□□ 1.31
NEK3-202ENST00000550841 INTS13Q9NVM9 706 aa23.21■■□□□ 1.31
NEK3-202ENST00000550841 R3HCC1Q9Y3T6 440 aaKnown RBP23.21■■□□□ 1.31
NEK3-202ENST00000550841 SYCE3A1L190 88 aa23.2■■□□□ 1.3
NEK3-202ENST00000550841 CASTOR2A6NHX0 329 aa23.2■■□□□ 1.3
NEK3-202ENST00000550841 IKBKBO14920 756 aa23.2■■□□□ 1.3
NEK3-202ENST00000550841 TADA2AO75478 443 aa23.2■■□□□ 1.3
NEK3-202ENST00000550841 TMEM191BP0C7N4 346 aa23.2■■□□□ 1.3
NEK3-202ENST00000550841 DLATP10515 647 aaKnown RBP23.2■■□□□ 1.3
NEK3-202ENST00000550841 PAX3P23760 479 aa23.2■■□□□ 1.3
NEK3-202ENST00000550841 LRPAP1P30533 357 aa23.2■■□□□ 1.3
NEK3-202ENST00000550841 VAMP7P51809 220 aa23.2■■□□□ 1.3
NEK3-202ENST00000550841 PLCB3Q01970 1234 aa23.2■■□□□ 1.3
NEK3-202ENST00000550841 FRMD5Q7Z6J6 570 aa23.2■■□□□ 1.3
NEK3-202ENST00000550841 KLHL23Q8NBE8 558 aa23.2■■□□□ 1.3
NEK3-202ENST00000550841 IGSF21Q96ID5 467 aa23.2■■□□□ 1.3
NEK3-202ENST00000550841 DPP3Q9NY33 737 aa23.2■■□□□ 1.3
NEK3-202ENST00000550841 MTUS1Q9ULD2 1270 aa23.2■■□□□ 1.3
NEK3-202ENST00000550841 LAMA2P24043 3122 aaKnown RBP23.19■■□□□ 1.3
NEK3-202ENST00000550841 A0A0C4DFX4 3053 aa23.19■■□□□ 1.3
NEK3-202ENST00000550841 NT5C1B-RDH14C9J2C7 533 aa23.19■■□□□ 1.3
NEK3-202ENST00000550841 H3BNC9 293 aa23.19■■□□□ 1.3
NEK3-202ENST00000550841 STX10O60499 249 aa23.19■■□□□ 1.3
NEK3-202ENST00000550841 B4GALT3O60512 393 aa23.19■■□□□ 1.3
NEK3-202ENST00000550841 FGF18O76093 207 aa23.19■■□□□ 1.3
NEK3-202ENST00000550841 CLDN10P78369 228 aa23.19■■□□□ 1.3
NEK3-202ENST00000550841 UBE3AQ05086 875 aa23.19■■□□□ 1.3
NEK3-202ENST00000550841 SOX4Q06945 474 aaPredicted RBP23.19■■□□□ 1.3
NEK3-202ENST00000550841 UPP1Q16831 310 aa23.19■■□□□ 1.3
NEK3-202ENST00000550841 ZSCAN23Q3MJ62 389 aa23.19■■□□□ 1.3
NEK3-202ENST00000550841 EFCAB13Q8IY85 973 aa23.19■■□□□ 1.3
NEK3-202ENST00000550841 ENOX1Q8TC92 643 aaKnown RBP23.19■■□□□ 1.3
NEK3-202ENST00000550841 EEF2KMTQ96G04 330 aa23.19■■□□□ 1.3
NEK3-202ENST00000550841 CERS4Q9HA82 394 aa23.19■■□□□ 1.3
NEK3-202ENST00000550841 TUBGCP4Q9UGJ1 667 aa23.19■■□□□ 1.3
NEK3-202ENST00000550841 ARMCX3Q9UH62 379 aaPredicted RBP23.19■■□□□ 1.3
NEK3-202ENST00000550841 LZTS1Q9Y250 596 aa23.19■■□□□ 1.3
NEK3-202ENST00000550841 PRG3Q9Y2Y8 225 aaPredicted RBP23.19■■□□□ 1.3
NEK3-202ENST00000550841 ANK1P16157 1881 aa23.19■■□□□ 1.3
NEK3-202ENST00000550841 PDCD11Q14690 1871 aaKnown RBP23.18■■□□□ 1.3
NEK3-202ENST00000550841 NLRC5Q86WI3 1866 aa23.18■■□□□ 1.3
NEK3-202ENST00000550841 TMEM189-UBE2V1I3L0A0 370 aa23.18■■□□□ 1.3
NEK3-202ENST00000550841 PODXLO00592 558 aa23.18■■□□□ 1.3
NEK3-202ENST00000550841 B3GAT3O94766 335 aa23.18■■□□□ 1.3
NEK3-202ENST00000550841 CLCNKBP51801 687 aa23.18■■□□□ 1.3
NEK3-202ENST00000550841 WNT7BP56706 349 aa23.18■■□□□ 1.3
NEK3-202ENST00000550841 MCCD1P59942 119 aaPredicted RBP23.18■■□□□ 1.3
NEK3-202ENST00000550841 BFSP1Q12934 665 aa23.18■■□□□ 1.3
NEK3-202ENST00000550841 GPM6BQ13491 265 aa23.18■■□□□ 1.3
NEK3-202ENST00000550841 BMS1Q14692 1282 aaKnown RBP23.18■■□□□ 1.3
NEK3-202ENST00000550841 CCDC40Q4G0X9 1142 aa23.18■■□□□ 1.3
NEK3-202ENST00000550841 FAM114A1Q8IWE2 563 aa23.18■■□□□ 1.3
NEK3-202ENST00000550841 GOLGA2P5Q9HBQ8 144 aa23.18■■□□□ 1.3
NEK3-202ENST00000550841 ITGA11Q9UKX5 1188 aa23.18■■□□□ 1.3
NEK3-202ENST00000550841 TRAPPC3O43617 180 aa23.17■■□□□ 1.3
NEK3-202ENST00000550841 CAVIN2O95810 425 aa23.17■■□□□ 1.3
NEK3-202ENST00000550841 GTF2H1P32780 548 aa23.17■■□□□ 1.3
NEK3-202ENST00000550841 PBX3P40426 434 aa23.17■■□□□ 1.3
NEK3-202ENST00000550841 ELAVL2Q12926 359 aaKnown RBP23.17■■□□□ 1.3
NEK3-202ENST00000550841 BORCS6Q96GS4 357 aa23.17■■□□□ 1.3
NEK3-202ENST00000550841 POP1Q99575 1024 aaKnown RBP23.17■■□□□ 1.3
NEK3-202ENST00000550841 LMAN2LQ9H0V9 348 aa23.17■■□□□ 1.3
NEK3-202ENST00000550841 DNAJC25Q9H1X3 360 aa23.17■■□□□ 1.3
NEK3-202ENST00000550841 THAP9Q9H5L6 903 aa23.17■■□□□ 1.3
NEK3-202ENST00000550841 ADAM28Q9UKQ2 775 aa23.17■■□□□ 1.3
NEK3-202ENST00000550841 LRRIQ3A6PVS8 624 aaPredicted RBP23.16■■□□□ 1.3
NEK3-202ENST00000550841 RBP5P82980 135 aa23.16■■□□□ 1.3
NEK3-202ENST00000550841 C9orf57Q5W0N0 161 aa23.16■■□□□ 1.3
NEK3-202ENST00000550841 DDX53Q86TM3 631 aaKnown RBP23.16■■□□□ 1.3
NEK3-202ENST00000550841 SPPL3Q8TCT6 385 aa23.16■■□□□ 1.3
NEK3-202ENST00000550841 MED15Q96RN5 788 aa23.16■■□□□ 1.3
NEK3-202ENST00000550841 GAS2L1Q99501 681 aaPredicted RBP23.16■■□□□ 1.3
NEK3-202ENST00000550841 PAAF1Q9BRP4 392 aa23.16■■□□□ 1.3
NEK3-202ENST00000550841 FUCA2Q9BTY2 467 aa23.16■■□□□ 1.3
NEK3-202ENST00000550841 MTMR12Q9C0I1 747 aa23.16■■□□□ 1.3
NEK3-202ENST00000550841 MAGEC2Q9UBF1 373 aaPredicted RBP23.16■■□□□ 1.3
NEK3-202ENST00000550841 NUB1Q9Y5A7 615 aa23.16■■□□□ 1.3
NEK3-202ENST00000550841 ANO9A1A5B4 782 aa23.15■■□□□ 1.3
NEK3-202ENST00000550841 PIRO00625 290 aa23.15■■□□□ 1.3
NEK3-202ENST00000550841 PHACTR2O75167 634 aa23.15■■□□□ 1.3
NEK3-202ENST00000550841 ITGB1P05556 798 aa23.15■■□□□ 1.3
NEK3-202ENST00000550841 PNPLA4P41247 253 aa23.15■■□□□ 1.3
NEK3-202ENST00000550841 PTPROQ16827 1216 aa23.15■■□□□ 1.3
NEK3-202ENST00000550841 ANO6Q4KMQ2 910 aa23.15■■□□□ 1.3
NEK3-202ENST00000550841 LMBRD2Q68DH5 695 aaPredicted RBP23.15■■□□□ 1.3
NEK3-202ENST00000550841 C11orf57Q6ZUT1 292 aaPredicted RBP23.15■■□□□ 1.3
NEK3-202ENST00000550841 TRAPPC11Q7Z392 1133 aa23.15■■□□□ 1.3
NEK3-202ENST00000550841 SPRED2Q7Z698 418 aa23.15■■□□□ 1.3
NEK3-202ENST00000550841 OR5B17Q8NGF7 314 aa23.15■■□□□ 1.3
NEK3-202ENST00000550841 PLEKHO2Q8TD55 490 aa23.15■■□□□ 1.3
NEK3-202ENST00000550841 BPIFA3Q9BQP9 254 aa23.15■■□□□ 1.3
NEK3-202ENST00000550841 MARCH5Q9NX47 278 aa23.15■■□□□ 1.3
NEK3-202ENST00000550841 KIAA1671Q9BY89 1806 aa23.15■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms