RNA–Protein interactions for RNA: ENST00000548401.1

LETMD1-216, Transcript of LETM1 domain containing 1, humanhuman

TSL 3

Gene LETMD1, Length 433 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-216ENST00000548401 C1orf127Q8N9H9 656 aa18.68■□□□□ 0.58
LETMD1-216ENST00000548401 C3orf58Q8NDZ4 430 aa18.68■□□□□ 0.58
LETMD1-216ENST00000548401 ZNF516Q92618 1163 aa18.68■□□□□ 0.58
LETMD1-216ENST00000548401 UROC1Q96N76 676 aa18.68■□□□□ 0.58
LETMD1-216ENST00000548401 SAMD11Q96NU1 681 aa18.68■□□□□ 0.58
LETMD1-216ENST00000548401 FAM193BQ96PV7 902 aaPredicted RBP18.68■□□□□ 0.58
LETMD1-216ENST00000548401 POP1Q99575 1024 aaKnown RBP18.68■□□□□ 0.58
LETMD1-216ENST00000548401 SLC28A3Q9HAS3 691 aa18.68■□□□□ 0.58
LETMD1-216ENST00000548401 RWDD3Q9Y3V2 267 aa18.68■□□□□ 0.58
LETMD1-216ENST00000548401 ANO9A1A5B4 782 aa18.67■□□□□ 0.58
LETMD1-216ENST00000548401 EPOPA6NHQ4 379 aa18.67■□□□□ 0.58
LETMD1-216ENST00000548401 TMEM189-UBE2V1I3L0A0 370 aa18.67■□□□□ 0.58
LETMD1-216ENST00000548401 NRP1O14786 923 aa18.67■□□□□ 0.58
LETMD1-216ENST00000548401 XPOTO43592 962 aaKnown RBP18.67■□□□□ 0.58
LETMD1-216ENST00000548401 ITGB1P05556 798 aa18.67■□□□□ 0.58
LETMD1-216ENST00000548401 IGFBP6P24592 240 aaPredicted RBP18.67■□□□□ 0.58
LETMD1-216ENST00000548401 BMPR1AP36894 532 aa18.67■□□□□ 0.58
LETMD1-216ENST00000548401 CLCNKBP51801 687 aa18.67■□□□□ 0.58
LETMD1-216ENST00000548401 TFAMQ00059 246 aaKnown RBP18.67■□□□□ 0.58
LETMD1-216ENST00000548401 MYL5Q02045 173 aa18.67■□□□□ 0.58
LETMD1-216ENST00000548401 UPP1Q16831 310 aa18.67■□□□□ 0.58
LETMD1-216ENST00000548401 EPC2Q52LR7 807 aa18.67■□□□□ 0.58
LETMD1-216ENST00000548401 SPOUT1Q5T280 376 aaKnown RBP18.67■□□□□ 0.58
LETMD1-216ENST00000548401 SCARA3Q6AZY7 606 aa18.67■□□□□ 0.58
LETMD1-216ENST00000548401 CD300LGQ6UXG3 332 aa18.67■□□□□ 0.58
LETMD1-216ENST00000548401 FRMD5Q7Z6J6 570 aa18.67■□□□□ 0.58
LETMD1-216ENST00000548401 TRIM59Q8IWR1 403 aa18.67■□□□□ 0.58
LETMD1-216ENST00000548401 BEST2Q8NFU1 509 aa18.67■□□□□ 0.58
LETMD1-216ENST00000548401 RABGGTAQ92696 567 aa18.67■□□□□ 0.58
LETMD1-216ENST00000548401 CNOT6LQ96LI5 555 aaKnown RBP18.67■□□□□ 0.58
LETMD1-216ENST00000548401 FNBP1Q96RU3 617 aa18.67■□□□□ 0.58
LETMD1-216ENST00000548401 PLVAPQ9BX97 442 aa18.67■□□□□ 0.58
LETMD1-216ENST00000548401 HSD3B7Q9H2F3 369 aa18.67■□□□□ 0.58
LETMD1-216ENST00000548401 TTYH1Q9H313 450 aaPredicted RBP18.67■□□□□ 0.58
LETMD1-216ENST00000548401 THAP9Q9H5L6 903 aa18.67■□□□□ 0.58
LETMD1-216ENST00000548401 ARMCX3Q9UH62 379 aaPredicted RBP18.67■□□□□ 0.58
LETMD1-216ENST00000548401 SIX4Q9UIU6 781 aa18.67■□□□□ 0.58
LETMD1-216ENST00000548401 PRG3Q9Y2Y8 225 aaPredicted RBP18.67■□□□□ 0.58
LETMD1-216ENST00000548401 NFE2L3Q9Y4A8 694 aa18.67■□□□□ 0.58
LETMD1-216ENST00000548401 SCN1AP35498 2009 aa18.67■□□□□ 0.58
LETMD1-216ENST00000548401 NT5C1B-RDH14C9J2C7 533 aa18.66■□□□□ 0.58
LETMD1-216ENST00000548401 PODXLO00592 558 aa18.66■□□□□ 0.58
LETMD1-216ENST00000548401 PPEF2O14830 753 aa18.66■□□□□ 0.58
LETMD1-216ENST00000548401 FGFR1OPO95684 399 aaKnown RBP18.66■□□□□ 0.58
LETMD1-216ENST00000548401 GNA14O95837 355 aa18.66■□□□□ 0.58
LETMD1-216ENST00000548401 EFEMP2O95967 443 aa18.66■□□□□ 0.58
LETMD1-216ENST00000548401 TMEM191BP0C7N4 346 aa18.66■□□□□ 0.58
LETMD1-216ENST00000548401 KRT13P13646 458 aa18.66■□□□□ 0.58
LETMD1-216ENST00000548401 PPM1AP35813 382 aa18.66■□□□□ 0.58
LETMD1-216ENST00000548401 OR1G1P47890 313 aa18.66■□□□□ 0.58
LETMD1-216ENST00000548401 ZNF445P59923 1031 aa18.66■□□□□ 0.58
LETMD1-216ENST00000548401 CDKAL1Q5VV42 579 aa18.66■□□□□ 0.58
LETMD1-216ENST00000548401 C15orf39Q6ZRI6 1047 aa18.66■□□□□ 0.58
LETMD1-216ENST00000548401 DHX40Q8IX18 779 aaKnown RBP18.66■□□□□ 0.58
LETMD1-216ENST00000548401 AOPEPQ8N6M6 819 aa18.66■□□□□ 0.58
LETMD1-216ENST00000548401 SLC35C1Q96A29 364 aa18.66■□□□□ 0.58
LETMD1-216ENST00000548401 IGSF21Q96ID5 467 aa18.66■□□□□ 0.58
LETMD1-216ENST00000548401 VN1R3Q9BXE9 311 aa18.66■□□□□ 0.58
LETMD1-216ENST00000548401 METTL14Q9HCE5 456 aaKnown RBP18.66■□□□□ 0.58
LETMD1-216ENST00000548401 AAASQ9NRG9 546 aa18.66■□□□□ 0.58
LETMD1-216ENST00000548401 DPP3Q9NY33 737 aa18.66■□□□□ 0.58
LETMD1-216ENST00000548401 MTUS1Q9ULD2 1270 aa18.66■□□□□ 0.58
LETMD1-216ENST00000548401 VWA8A3KMH1 1905 aa18.65■□□□□ 0.58
LETMD1-216ENST00000548401 CARNS1A5YM72 827 aa18.65■□□□□ 0.58
LETMD1-216ENST00000548401 IKBKBO14920 756 aa18.65■□□□□ 0.58
LETMD1-216ENST00000548401 TNNI1P19237 187 aa18.65■□□□□ 0.58
LETMD1-216ENST00000548401 RPL9P32969 192 aaKnown RBP18.65■□□□□ 0.58
LETMD1-216ENST00000548401 ALDH7A1P49419 539 aaKnown RBP18.65■□□□□ 0.58
LETMD1-216ENST00000548401 ZNF165P49910 485 aa18.65■□□□□ 0.58
LETMD1-216ENST00000548401 PPP3CAQ08209 521 aa18.65■□□□□ 0.58
LETMD1-216ENST00000548401 CCDC40Q4G0X9 1142 aa18.65■□□□□ 0.58
LETMD1-216ENST00000548401 TDRD10Q5VZ19 366 aaKnown RBP18.65■□□□□ 0.58
LETMD1-216ENST00000548401 C9orf57Q5W0N0 161 aa18.65■□□□□ 0.58
LETMD1-216ENST00000548401 LRSAM1Q6UWE0 723 aa18.65■□□□□ 0.58
LETMD1-216ENST00000548401 RNF168Q8IYW5 571 aaPredicted RBP18.65■□□□□ 0.58
LETMD1-216ENST00000548401 KLHL23Q8NBE8 558 aa18.65■□□□□ 0.58
LETMD1-216ENST00000548401 DDX27Q96GQ7 796 aaKnown RBP18.65■□□□□ 0.58
LETMD1-216ENST00000548401 ANKRD36BP1Q96IX9 119 aa18.65■□□□□ 0.58
LETMD1-216ENST00000548401 NAT10Q9H0A0 1025 aaKnown RBP18.65■□□□□ 0.58
LETMD1-216ENST00000548401 ZNF576Q9H609 170 aa18.65■□□□□ 0.58
LETMD1-216ENST00000548401 SAMSN1Q9NSI8 373 aaKnown RBP18.65■□□□□ 0.58
LETMD1-216ENST00000548401 SPG21Q9NZD8 308 aa18.65■□□□□ 0.58
LETMD1-216ENST00000548401 ITGA11Q9UKX5 1188 aa18.65■□□□□ 0.58
LETMD1-216ENST00000548401 FAN1Q9Y2M0 1017 aa18.65■□□□□ 0.58
LETMD1-216ENST00000548401 PCDHB12Q9Y5F1 795 aa18.65■□□□□ 0.58
LETMD1-216ENST00000548401 PIRO00625 290 aa18.64■□□□□ 0.57
LETMD1-216ENST00000548401 FGF18O76093 207 aa18.64■□□□□ 0.57
LETMD1-216ENST00000548401 C4BPAP04003 597 aaKnown RBP18.64■□□□□ 0.57
LETMD1-216ENST00000548401 ITGB3P05106 788 aa18.64■□□□□ 0.57
LETMD1-216ENST00000548401 RB1P06400 928 aa18.64■□□□□ 0.57
LETMD1-216ENST00000548401 POLR2BP30876 1174 aaKnown RBP18.64■□□□□ 0.57
LETMD1-216ENST00000548401 AARSP49588 968 aaKnown RBP eCLIP18.64■□□□□ 0.57
LETMD1-216ENST00000548401 PLCB3Q01970 1234 aa18.64■□□□□ 0.57
LETMD1-216ENST00000548401 IQCB1Q15051 598 aa18.64■□□□□ 0.57
LETMD1-216ENST00000548401 TPD52L1Q16890 204 aaPredicted RBP18.64■□□□□ 0.57
LETMD1-216ENST00000548401 DUOXA2Q1HG44 320 aa18.64■□□□□ 0.57
LETMD1-216ENST00000548401 ZACNQ401N2 412 aa18.64■□□□□ 0.57
LETMD1-216ENST00000548401 DCAF17Q5H9S7 520 aaPredicted RBP18.64■□□□□ 0.57
LETMD1-216ENST00000548401 TRAPPC11Q7Z392 1133 aa18.64■□□□□ 0.57
LETMD1-216ENST00000548401 USP37Q86T82 979 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms