RNA–Protein interactions for RNA: ENST00000547247.5

SMARCD1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 1 (best)

Gene SMARCD1, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-203ENST00000547247 POP1Q99575 1024 aaKnown RBP25.08■■□□□ 1.61
SMARCD1-203ENST00000547247 GZF1Q9H116 711 aaPredicted RBP25.08■■□□□ 1.61
SMARCD1-203ENST00000547247 ZNF576Q9H609 170 aa25.08■■□□□ 1.61
SMARCD1-203ENST00000547247 INTS13Q9NVM9 706 aa25.08■■□□□ 1.61
SMARCD1-203ENST00000547247 CACNG4Q9UBN1 327 aa25.08■■□□□ 1.61
SMARCD1-203ENST00000547247 CHD9Q3L8U1 2897 aa25.07■■□□□ 1.6
SMARCD1-203ENST00000547247 KIAA1671Q9BY89 1806 aa25.07■■□□□ 1.6
SMARCD1-203ENST00000547247 GNA14O95837 355 aa25.07■■□□□ 1.6
SMARCD1-203ENST00000547247 RB1P06400 928 aa25.07■■□□□ 1.6
SMARCD1-203ENST00000547247 RPL9P32969 192 aaKnown RBP25.07■■□□□ 1.6
SMARCD1-203ENST00000547247 PPM1AP35813 382 aa25.07■■□□□ 1.6
SMARCD1-203ENST00000547247 ENPEPQ07075 957 aa25.07■■□□□ 1.6
SMARCD1-203ENST00000547247 DUOXA2Q1HG44 320 aa25.07■■□□□ 1.6
SMARCD1-203ENST00000547247 DEFB123Q8N688 67 aa25.07■■□□□ 1.6
SMARCD1-203ENST00000547247 FAM161BQ96MY7 647 aa25.07■■□□□ 1.6
SMARCD1-203ENST00000547247 PAAF1Q9BRP4 392 aa25.07■■□□□ 1.6
SMARCD1-203ENST00000547247 TTYH1Q9H313 450 aaPredicted RBP25.07■■□□□ 1.6
SMARCD1-203ENST00000547247 CERS4Q9HA82 394 aa25.07■■□□□ 1.6
SMARCD1-203ENST00000547247 METTL14Q9HCE5 456 aaKnown RBP25.07■■□□□ 1.6
SMARCD1-203ENST00000547247 DPP3Q9NY33 737 aa25.07■■□□□ 1.6
SMARCD1-203ENST00000547247 SPG21Q9NZD8 308 aa25.07■■□□□ 1.6
SMARCD1-203ENST00000547247 ARMCX3Q9UH62 379 aaPredicted RBP25.07■■□□□ 1.6
SMARCD1-203ENST00000547247 PRG3Q9Y2Y8 225 aaPredicted RBP25.07■■□□□ 1.6
SMARCD1-203ENST00000547247 NLRC5Q86WI3 1866 aa25.06■■□□□ 1.6
SMARCD1-203ENST00000547247 LRRIQ3A6PVS8 624 aaPredicted RBP25.06■■□□□ 1.6
SMARCD1-203ENST00000547247 C5orf67F2Z3F1 127 aa25.06■■□□□ 1.6
SMARCD1-203ENST00000547247 CLCNKBP51801 687 aa25.06■■□□□ 1.6
SMARCD1-203ENST00000547247 CLDN10P78369 228 aa25.06■■□□□ 1.6
SMARCD1-203ENST00000547247 UPP1Q16831 310 aa25.06■■□□□ 1.6
SMARCD1-203ENST00000547247 CCDC40Q4G0X9 1142 aa25.06■■□□□ 1.6
SMARCD1-203ENST00000547247 FRMD5Q7Z6J6 570 aa25.06■■□□□ 1.6
SMARCD1-203ENST00000547247 SLC39A11Q8N1S5 342 aa25.06■■□□□ 1.6
SMARCD1-203ENST00000547247 COLEC11Q9BWP8 271 aa25.06■■□□□ 1.6
SMARCD1-203ENST00000547247 PTPRJQ12913 1337 aa25.06■■□□□ 1.6
SMARCD1-203ENST00000547247 TNNC2P02585 160 aa25.05■■□□□ 1.6
SMARCD1-203ENST00000547247 LRPAP1P30533 357 aa25.05■■□□□ 1.6
SMARCD1-203ENST00000547247 GUCY2FP51841 1108 aa25.05■■□□□ 1.6
SMARCD1-203ENST00000547247 DLG4P78352 724 aa25.05■■□□□ 1.6
SMARCD1-203ENST00000547247 FBXO22Q8NEZ5 403 aa25.05■■□□□ 1.6
SMARCD1-203ENST00000547247 OR5B17Q8NGF7 314 aa25.05■■□□□ 1.6
SMARCD1-203ENST00000547247 ARNTL2Q8WYA1 636 aa25.05■■□□□ 1.6
SMARCD1-203ENST00000547247 RABGGTAQ92696 567 aa25.05■■□□□ 1.6
SMARCD1-203ENST00000547247 C11orf84Q9BUA3 381 aaPredicted RBP25.05■■□□□ 1.6
SMARCD1-203ENST00000547247 MTMR12Q9C0I1 747 aa25.05■■□□□ 1.6
SMARCD1-203ENST00000547247 PODXLO00592 558 aa25.05■■□□□ 1.6
SMARCD1-203ENST00000547247 IKBKBO14920 756 aa25.05■■□□□ 1.6
SMARCD1-203ENST00000547247 AP3M2P53677 418 aa25.05■■□□□ 1.6
SMARCD1-203ENST00000547247 MCCD1P59942 119 aaPredicted RBP25.05■■□□□ 1.6
SMARCD1-203ENST00000547247 DCLRE1AQ6PJP8 1040 aa25.05■■□□□ 1.6
SMARCD1-203ENST00000547247 KLHL23Q8NBE8 558 aa25.05■■□□□ 1.6
SMARCD1-203ENST00000547247 IGSF21Q96ID5 467 aa25.05■■□□□ 1.6
SMARCD1-203ENST00000547247 THAP9Q9H5L6 903 aa25.05■■□□□ 1.6
SMARCD1-203ENST00000547247 FGF18O76093 207 aa25.04■■□□□ 1.6
SMARCD1-203ENST00000547247 MARSP56192 900 aaKnown RBP25.04■■□□□ 1.6
SMARCD1-203ENST00000547247 TMEM130Q8N3G9 435 aa25.04■■□□□ 1.6
SMARCD1-203ENST00000547247 ZNF516Q92618 1163 aa25.04■■□□□ 1.6
SMARCD1-203ENST00000547247 TMEM169Q96HH4 297 aa25.04■■□□□ 1.6
SMARCD1-203ENST00000547247 FAM84AQ96KN4 292 aa25.04■■□□□ 1.6
SMARCD1-203ENST00000547247 BPIFA3Q9BQP9 254 aa25.04■■□□□ 1.6
SMARCD1-203ENST00000547247 NFE2L3Q9Y4A8 694 aa25.04■■□□□ 1.6
SMARCD1-203ENST00000547247 CDH23Q9H251 3354 aa25.04■■□□□ 1.6
SMARCD1-203ENST00000547247 B3GAT3O94766 335 aa25.03■■□□□ 1.6
SMARCD1-203ENST00000547247 ZNF165P49910 485 aa25.03■■□□□ 1.6
SMARCD1-203ENST00000547247 MYL5Q02045 173 aa25.03■■□□□ 1.6
SMARCD1-203ENST00000547247 KRT17Q04695 432 aa25.03■■□□□ 1.6
SMARCD1-203ENST00000547247 TCERG1LQ5VWI1 586 aa25.03■■□□□ 1.6
SMARCD1-203ENST00000547247 TMEM173Q86WV6 379 aaPredicted RBP25.03■■□□□ 1.6
SMARCD1-203ENST00000547247 C1orf127Q8N9H9 656 aa25.03■■□□□ 1.6
SMARCD1-203ENST00000547247 MARCH5Q9NX47 278 aa25.03■■□□□ 1.6
SMARCD1-203ENST00000547247 ITGA11Q9UKX5 1188 aa25.03■■□□□ 1.6
SMARCD1-203ENST00000547247 CHD7Q9P2D1 2997 aa25.03■■□□□ 1.6
SMARCD1-203ENST00000547247 ANO9A1A5B4 782 aa25.02■■□□□ 1.6
SMARCD1-203ENST00000547247 F8W810 466 aa25.02■■□□□ 1.6
SMARCD1-203ENST00000547247 H3BNC9 293 aa25.02■■□□□ 1.6
SMARCD1-203ENST00000547247 TMEM189-UBE2V1I3L0A0 370 aa25.02■■□□□ 1.6
SMARCD1-203ENST00000547247 TADA2AO75478 443 aa25.02■■□□□ 1.6
SMARCD1-203ENST00000547247 KIF4AO95239 1232 aa25.02■■□□□ 1.6
SMARCD1-203ENST00000547247 ITGB3P05106 788 aa25.02■■□□□ 1.6
SMARCD1-203ENST00000547247 TRIM49P0CI25 452 aa25.02■■□□□ 1.6
SMARCD1-203ENST00000547247 TRIM49CP0CI26 452 aa25.02■■□□□ 1.6
SMARCD1-203ENST00000547247 PLCB3Q01970 1234 aa25.02■■□□□ 1.6
SMARCD1-203ENST00000547247 C1orf220Q5T0J3 134 aa25.02■■□□□ 1.6
SMARCD1-203ENST00000547247 C9orf57Q5W0N0 161 aa25.02■■□□□ 1.6
SMARCD1-203ENST00000547247 TRAPPC11Q7Z392 1133 aa25.02■■□□□ 1.6
SMARCD1-203ENST00000547247 IRF2BP1Q8IU81 584 aa25.02■■□□□ 1.6
SMARCD1-203ENST00000547247 FAM114A1Q8IWE2 563 aa25.02■■□□□ 1.6
SMARCD1-203ENST00000547247 CNOT6LQ96LI5 555 aaKnown RBP25.02■■□□□ 1.6
SMARCD1-203ENST00000547247 ADAM28Q9UKQ2 775 aa25.02■■□□□ 1.6
SMARCD1-203ENST00000547247 R3HCC1Q9Y3T6 440 aaKnown RBP25.02■■□□□ 1.6
SMARCD1-203ENST00000547247 ITGB1P05556 798 aa25.01■■□□□ 1.59
SMARCD1-203ENST00000547247 DCAF17Q5H9S7 520 aaPredicted RBP25.01■■□□□ 1.59
SMARCD1-203ENST00000547247 CREBRFQ8IUR6 639 aa25.01■■□□□ 1.59
SMARCD1-203ENST00000547247 C3orf58Q8NDZ4 430 aa25.01■■□□□ 1.59
SMARCD1-203ENST00000547247 BCL7CQ8WUZ0 217 aaPredicted RBP25.01■■□□□ 1.59
SMARCD1-203ENST00000547247 SAMSN1Q9NSI8 373 aaKnown RBP25.01■■□□□ 1.59
SMARCD1-203ENST00000547247 MTMR10Q9NXD2 777 aa25.01■■□□□ 1.59
SMARCD1-203ENST00000547247 PIRO00625 290 aa25.01■■□□□ 1.59
SMARCD1-203ENST00000547247 STX10O60499 249 aa25.01■■□□□ 1.59
SMARCD1-203ENST00000547247 CAVIN2O95810 425 aa25.01■■□□□ 1.59
SMARCD1-203ENST00000547247 C4BPAP04003 597 aaKnown RBP25.01■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms