RNA–Protein interactions for RNA: ENST00000546229.5

COPS7A-221, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-221ENST00000546229 CCT6AP40227 531 aaKnown RBP13.79□□□□□ -0.2
COPS7A-221ENST00000546229 ZNF528Q3MIS6 628 aa13.79□□□□□ -0.2
COPS7A-221ENST00000546229 VARS2Q5ST30 1063 aaKnown RBP13.79□□□□□ -0.2
COPS7A-221ENST00000546229 ANKS3Q6ZW76 656 aa13.79□□□□□ -0.2
COPS7A-221ENST00000546229 C1orf186Q6ZWK4 172 aa13.79□□□□□ -0.2
COPS7A-221ENST00000546229 TMEM134Q9H6X4 195 aa13.79□□□□□ -0.2
COPS7A-221ENST00000546229 LTB4R2Q9NPC1 389 aa13.79□□□□□ -0.2
COPS7A-221ENST00000546229 LIMCH1Q9UPQ0 1083 aa13.79□□□□□ -0.2
COPS7A-221ENST00000546229 KIAA1024Q9UPX6 916 aa13.79□□□□□ -0.2
COPS7A-221ENST00000546229 PCDHB6Q9Y5E3 794 aa13.79□□□□□ -0.2
COPS7A-221ENST00000546229 TICRRQ7Z2Z1 1910 aa13.79□□□□□ -0.2
COPS7A-221ENST00000546229 F5P12259 2224 aa13.79□□□□□ -0.2
COPS7A-221ENST00000546229 PODXLO00592 558 aa13.78□□□□□ -0.2
COPS7A-221ENST00000546229 HIP1RO75146 1068 aa13.78□□□□□ -0.2
COPS7A-221ENST00000546229 PDIA5Q14554 519 aa13.78□□□□□ -0.2
COPS7A-221ENST00000546229 SAFBQ15424 915 aaKnown RBP eCLIP13.78□□□□□ -0.2
COPS7A-221ENST00000546229 ZNF568Q3ZCX4 644 aa13.78□□□□□ -0.2
COPS7A-221ENST00000546229 SLC44A4Q53GD3 710 aa13.78□□□□□ -0.2
COPS7A-221ENST00000546229 HYIQ5T013 277 aa13.78□□□□□ -0.2
COPS7A-221ENST00000546229 RINT1Q6NUQ1 792 aa13.78□□□□□ -0.2
COPS7A-221ENST00000546229 TCEAL8Q8IYN2 117 aa13.78□□□□□ -0.2
COPS7A-221ENST00000546229 ZNF461Q8TAF7 563 aa13.78□□□□□ -0.2
COPS7A-221ENST00000546229 KCNN1Q92952 543 aa13.78□□□□□ -0.2
COPS7A-221ENST00000546229 C18orf25Q96B23 403 aaPredicted RBP13.78□□□□□ -0.2
COPS7A-221ENST00000546229 TCEAL4Q96EI5 215 aa13.78□□□□□ -0.2
COPS7A-221ENST00000546229 IFT74Q96LB3 600 aa13.78□□□□□ -0.2
COPS7A-221ENST00000546229 TARS2Q9BW92 718 aaKnown RBP13.78□□□□□ -0.2
COPS7A-221ENST00000546229 HAPLN2Q9GZV7 340 aa13.78□□□□□ -0.2
COPS7A-221ENST00000546229 PRMT8Q9NR22 394 aaPredicted RBP13.78□□□□□ -0.2
COPS7A-221ENST00000546229 GDE1Q9NZC3 331 aa13.78□□□□□ -0.2
COPS7A-221ENST00000546229 LRWD1Q9UFC0 647 aa13.78□□□□□ -0.2
COPS7A-221ENST00000546229 MYH11P35749 1972 aa13.78□□□□□ -0.2
COPS7A-221ENST00000546229 K7ERI5 159 aa13.77□□□□□ -0.21
COPS7A-221ENST00000546229 STK25O00506 426 aa13.77□□□□□ -0.21
COPS7A-221ENST00000546229 SYN3O14994 580 aa13.77□□□□□ -0.21
COPS7A-221ENST00000546229 FAM189A1O60320 539 aa13.77□□□□□ -0.21
COPS7A-221ENST00000546229 LILRB5O75023 590 aa13.77□□□□□ -0.21
COPS7A-221ENST00000546229 MCF2P10911 925 aa13.77□□□□□ -0.21
COPS7A-221ENST00000546229 ATF2P15336 505 aa13.77□□□□□ -0.21
COPS7A-221ENST00000546229 CD72P21854 359 aa13.77□□□□□ -0.21
COPS7A-221ENST00000546229 EPHA5P54756 1037 aa13.77□□□□□ -0.21
COPS7A-221ENST00000546229 PEX3P56589 373 aa13.77□□□□□ -0.21
COPS7A-221ENST00000546229 PTGDRQ13258 359 aa13.77□□□□□ -0.21
COPS7A-221ENST00000546229 TANGO2Q6ICL3 276 aa13.77□□□□□ -0.21
COPS7A-221ENST00000546229 ZFHX4Q86UP3 3567 aa13.77□□□□□ -0.21
COPS7A-221ENST00000546229 ZBTB44Q8NCP5 570 aa13.77□□□□□ -0.21
COPS7A-221ENST00000546229 BEST2Q8NFU1 509 aa13.77□□□□□ -0.21
COPS7A-221ENST00000546229 SNX29Q8TEQ0 813 aa13.77□□□□□ -0.21
COPS7A-221ENST00000546229 LRRC15Q8TF66 581 aa13.77□□□□□ -0.21
COPS7A-221ENST00000546229 SHDQ96IW2 340 aa13.77□□□□□ -0.21
COPS7A-221ENST00000546229 ZBTB45Q96K62 511 aaPredicted RBP13.77□□□□□ -0.21
COPS7A-221ENST00000546229 SUSD3Q96L08 255 aa13.77□□□□□ -0.21
COPS7A-221ENST00000546229 NTPCRQ9BSD7 190 aaKnown RBP13.77□□□□□ -0.21
COPS7A-221ENST00000546229 MRPL4Q9BYD3 311 aaKnown RBP13.77□□□□□ -0.21
COPS7A-221ENST00000546229 FBXL5Q9UKA1 691 aa13.77□□□□□ -0.21
COPS7A-221ENST00000546229 FBXO4Q9UKT5 387 aa13.77□□□□□ -0.21
COPS7A-221ENST00000546229 POLIQ9UNA4 740 aa13.77□□□□□ -0.21
COPS7A-221ENST00000546229 INSL5Q9Y5Q6 135 aa13.77□□□□□ -0.21
COPS7A-221ENST00000546229 ANK1P16157 1881 aa13.76□□□□□ -0.21
COPS7A-221ENST00000546229 ARNTLO00327 626 aa13.76□□□□□ -0.21
COPS7A-221ENST00000546229 MICAL2O94851 1124 aa13.76□□□□□ -0.21
COPS7A-221ENST00000546229 GUCY2CP25092 1073 aa13.76□□□□□ -0.21
COPS7A-221ENST00000546229 CDC25AP30304 524 aa13.76□□□□□ -0.21
COPS7A-221ENST00000546229 PRPHP41219 470 aa13.76□□□□□ -0.21
COPS7A-221ENST00000546229 RPS9P46781 194 aaKnown RBP13.76□□□□□ -0.21
COPS7A-221ENST00000546229 AARSP49588 968 aaKnown RBP eCLIP13.76□□□□□ -0.21
COPS7A-221ENST00000546229 OSTNP61366 133 aa13.76□□□□□ -0.21
COPS7A-221ENST00000546229 HMGN5P82970 282 aaKnown RBP13.76□□□□□ -0.21
COPS7A-221ENST00000546229 TMEM132AQ24JP5 1023 aa13.76□□□□□ -0.21
COPS7A-221ENST00000546229 SLC10A6Q3KNW5 377 aa13.76□□□□□ -0.21
COPS7A-221ENST00000546229 ZC3H14Q6PJT7 736 aaKnown RBP13.76□□□□□ -0.21
COPS7A-221ENST00000546229 MPZL3Q6UWV2 235 aa13.76□□□□□ -0.21
COPS7A-221ENST00000546229 DCLK2Q8N568 766 aa13.76□□□□□ -0.21
COPS7A-221ENST00000546229 TMEM161BQ8NDZ6 487 aa13.76□□□□□ -0.21
COPS7A-221ENST00000546229 ELSPBP1Q96BH3 223 aa13.76□□□□□ -0.21
COPS7A-221ENST00000546229 PNMA5Q96PV4 448 aa13.76□□□□□ -0.21
COPS7A-221ENST00000546229 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.76□□□□□ -0.21
COPS7A-221ENST00000546229 TOPORSQ9NS56 1045 aaPredicted RBP13.76□□□□□ -0.21
COPS7A-221ENST00000546229 DLL3Q9NYJ7 618 aa13.76□□□□□ -0.21
COPS7A-221ENST00000546229 TUBGCP4Q9UGJ1 667 aa13.76□□□□□ -0.21
COPS7A-221ENST00000546229 MRPS23Q9Y3D9 190 aaKnown RBP13.76□□□□□ -0.21
COPS7A-221ENST00000546229 NUP210Q8TEM1 1887 aaPredicted RBP13.76□□□□□ -0.21
COPS7A-221ENST00000546229 KMT2BQ9UMN6 2715 aaPredicted RBP13.76□□□□□ -0.21
COPS7A-221ENST00000546229 MED19A0JLT2 244 aaPredicted RBP13.75□□□□□ -0.21
COPS7A-221ENST00000546229 TRAPPC3O43617 180 aa13.75□□□□□ -0.21
COPS7A-221ENST00000546229 MAPTP10636 758 aaKnown RBP13.75□□□□□ -0.21
COPS7A-221ENST00000546229 RFX1P22670 979 aa13.75□□□□□ -0.21
COPS7A-221ENST00000546229 MAGEA9P43362 315 aa13.75□□□□□ -0.21
COPS7A-221ENST00000546229 PFKPQ01813 784 aa13.75□□□□□ -0.21
COPS7A-221ENST00000546229 DMP1Q13316 513 aaPredicted RBP13.75□□□□□ -0.21
COPS7A-221ENST00000546229 WDR44Q5JSH3 913 aa13.75□□□□□ -0.21
COPS7A-221ENST00000546229 FAM78AQ5JUQ0 283 aa13.75□□□□□ -0.21
COPS7A-221ENST00000546229 TPRG1Q6ZUI0 275 aa13.75□□□□□ -0.21
COPS7A-221ENST00000546229 MAP4K3Q8IVH8 894 aa13.75□□□□□ -0.21
COPS7A-221ENST00000546229 SPIRE2Q8WWL2 714 aa13.75□□□□□ -0.21
COPS7A-221ENST00000546229 RUBCNQ92622 972 aa13.75□□□□□ -0.21
COPS7A-221ENST00000546229 DNASE1L2Q92874 299 aa13.75□□□□□ -0.21
COPS7A-221ENST00000546229 MCRS1Q96EZ8 462 aa13.75□□□□□ -0.21
COPS7A-221ENST00000546229 ZSWIM3Q96MP5 696 aa13.75□□□□□ -0.21
COPS7A-221ENST00000546229 ASB16Q96NS5 453 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms