RNA–Protein interactions for RNA: ENST00000546215.5

SCARB1-211, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARB1, Length 1,597 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-211ENST00000546215 DUSP9Q99956 384 aaKnown RBP22.52■■□□□ 1.2
SCARB1-211ENST00000546215 COL4A4P53420 1690 aaPredicted RBP22.52■■□□□ 1.2
SCARB1-211ENST00000546215 CETN3O15182 167 aa22.51■■□□□ 1.19
SCARB1-211ENST00000546215 KIF4AO95239 1232 aa22.51■■□□□ 1.19
SCARB1-211ENST00000546215 EFEMP2O95967 443 aa22.51■■□□□ 1.19
SCARB1-211ENST00000546215 LRPAP1P30533 357 aa22.51■■□□□ 1.19
SCARB1-211ENST00000546215 RPL9P32969 192 aaKnown RBP22.51■■□□□ 1.19
SCARB1-211ENST00000546215 UBE3AQ05086 875 aa22.51■■□□□ 1.19
SCARB1-211ENST00000546215 ADGRE1Q14246 886 aa22.51■■□□□ 1.19
SCARB1-211ENST00000546215 NFKBIBQ15653 356 aa22.51■■□□□ 1.19
SCARB1-211ENST00000546215 BEST2Q8NFU1 509 aa22.51■■□□□ 1.19
SCARB1-211ENST00000546215 PLEKHO2Q8TD55 490 aa22.51■■□□□ 1.19
SCARB1-211ENST00000546215 POF1BQ8WVV4 589 aa22.51■■□□□ 1.19
SCARB1-211ENST00000546215 SYAP1Q96A49 352 aaPredicted RBP22.51■■□□□ 1.19
SCARB1-211ENST00000546215 VN1R3Q9BXE9 311 aa22.51■■□□□ 1.19
SCARB1-211ENST00000546215 LZTS1Q9Y250 596 aa22.51■■□□□ 1.19
SCARB1-211ENST00000546215 REV3LO60673 3130 aa22.51■■□□□ 1.19
SCARB1-211ENST00000546215 EYSQ5T1H1 3165 aa22.51■■□□□ 1.19
SCARB1-211ENST00000546215 MYO7AQ13402 2215 aa22.51■■□□□ 1.19
SCARB1-211ENST00000546215 BICDL2A1A5D9 508 aa22.5■■□□□ 1.19
SCARB1-211ENST00000546215 TMEM189-UBE2V1I3L0A0 370 aa22.5■■□□□ 1.19
SCARB1-211ENST00000546215 TULP1O00294 542 aaPredicted RBP22.5■■□□□ 1.19
SCARB1-211ENST00000546215 PODXLO00592 558 aa22.5■■□□□ 1.19
SCARB1-211ENST00000546215 STX17P56962 302 aa22.5■■□□□ 1.19
SCARB1-211ENST00000546215 DCLRE1AQ6PJP8 1040 aa22.5■■□□□ 1.19
SCARB1-211ENST00000546215 CD300LGQ6UXG3 332 aa22.5■■□□□ 1.19
SCARB1-211ENST00000546215 DDX53Q86TM3 631 aaKnown RBP22.5■■□□□ 1.19
SCARB1-211ENST00000546215 C3orf58Q8NDZ4 430 aa22.5■■□□□ 1.19
SCARB1-211ENST00000546215 PARD3BQ8TEW8 1205 aa22.5■■□□□ 1.19
SCARB1-211ENST00000546215 CCDC127Q96BQ5 260 aa22.5■■□□□ 1.19
SCARB1-211ENST00000546215 MED15Q96RN5 788 aa22.5■■□□□ 1.19
SCARB1-211ENST00000546215 RWDD2AQ9UIY3 292 aa22.5■■□□□ 1.19
SCARB1-211ENST00000546215 ADAM28Q9UKQ2 775 aa22.5■■□□□ 1.19
SCARB1-211ENST00000546215 PTPRJQ12913 1337 aa22.5■■□□□ 1.19
SCARB1-211ENST00000546215 B3GAT3O94766 335 aa22.5■■□□□ 1.19
SCARB1-211ENST00000546215 PSMC2P35998 433 aaKnown RBP22.5■■□□□ 1.19
SCARB1-211ENST00000546215 TFAMQ00059 246 aaKnown RBP22.5■■□□□ 1.19
SCARB1-211ENST00000546215 SKOR2Q2VWA4 1001 aaPredicted RBP22.5■■□□□ 1.19
SCARB1-211ENST00000546215 LMBRD2Q68DH5 695 aaPredicted RBP22.5■■□□□ 1.19
SCARB1-211ENST00000546215 WDR49Q8IV35 697 aa22.5■■□□□ 1.19
SCARB1-211ENST00000546215 FAM84AQ96KN4 292 aa22.5■■□□□ 1.19
SCARB1-211ENST00000546215 FNBP1Q96RU3 617 aa22.5■■□□□ 1.19
SCARB1-211ENST00000546215 POP1Q99575 1024 aaKnown RBP22.5■■□□□ 1.19
SCARB1-211ENST00000546215 MKNK1Q9BUB5 465 aa22.5■■□□□ 1.19
SCARB1-211ENST00000546215 LMAN2LQ9H0V9 348 aa22.5■■□□□ 1.19
SCARB1-211ENST00000546215 INTS13Q9NVM9 706 aa22.5■■□□□ 1.19
SCARB1-211ENST00000546215 DPP3Q9NY33 737 aa22.5■■□□□ 1.19
SCARB1-211ENST00000546215 PUF60Q9UHX1 559 aaKnown RBP22.5■■□□□ 1.19
SCARB1-211ENST00000546215 TADA2AO75478 443 aa22.49■■□□□ 1.19
SCARB1-211ENST00000546215 DLATP10515 647 aaKnown RBP22.49■■□□□ 1.19
SCARB1-211ENST00000546215 POU3F3P20264 500 aaPredicted RBP22.49■■□□□ 1.19
SCARB1-211ENST00000546215 SASS6Q6UVJ0 657 aa22.49■■□□□ 1.19
SCARB1-211ENST00000546215 FAM186BQ8IYM0 893 aa22.49■■□□□ 1.19
SCARB1-211ENST00000546215 RNF168Q8IYW5 571 aaPredicted RBP22.49■■□□□ 1.19
SCARB1-211ENST00000546215 OR5B17Q8NGF7 314 aa22.49■■□□□ 1.19
SCARB1-211ENST00000546215 HASPINQ8TF76 798 aa22.49■■□□□ 1.19
SCARB1-211ENST00000546215 CACTINQ8WUQ7 758 aaKnown RBP22.49■■□□□ 1.19
SCARB1-211ENST00000546215 MYLIPQ8WY64 445 aa22.49■■□□□ 1.19
SCARB1-211ENST00000546215 BORCS6Q96GS4 357 aa22.49■■□□□ 1.19
SCARB1-211ENST00000546215 CGRRF1Q99675 332 aa22.49■■□□□ 1.19
SCARB1-211ENST00000546215 ANO9A1A5B4 782 aa22.48■■□□□ 1.19
SCARB1-211ENST00000546215 MCCD1P59942 119 aaPredicted RBP22.48■■□□□ 1.19
SCARB1-211ENST00000546215 CLDN10P78369 228 aa22.48■■□□□ 1.19
SCARB1-211ENST00000546215 C9orf57Q5W0N0 161 aa22.48■■□□□ 1.19
SCARB1-211ENST00000546215 C1orf127Q8N9H9 656 aa22.48■■□□□ 1.19
SCARB1-211ENST00000546215 ZNF516Q92618 1163 aa22.48■■□□□ 1.19
SCARB1-211ENST00000546215 MRPL38Q96DV4 380 aaKnown RBP22.48■■□□□ 1.19
SCARB1-211ENST00000546215 GAS2L1Q99501 681 aaPredicted RBP22.48■■□□□ 1.19
SCARB1-211ENST00000546215 GPR62Q9BZJ7 368 aa22.48■■□□□ 1.19
SCARB1-211ENST00000546215 MTMR12Q9C0I1 747 aa22.48■■□□□ 1.19
SCARB1-211ENST00000546215 LMCD1Q9NZU5 365 aa22.48■■□□□ 1.19
SCARB1-211ENST00000546215 DACH1Q9UI36 760 aa22.48■■□□□ 1.19
SCARB1-211ENST00000546215 PRRC2BQ5JSZ5 2229 aaKnown RBP22.48■■□□□ 1.19
SCARB1-211ENST00000546215 LRRIQ3A6PVS8 624 aaPredicted RBP22.47■■□□□ 1.19
SCARB1-211ENST00000546215 PIRO00625 290 aa22.47■■□□□ 1.19
SCARB1-211ENST00000546215 PPEF2O14830 753 aa22.47■■□□□ 1.19
SCARB1-211ENST00000546215 TNNI1P19237 187 aa22.47■■□□□ 1.19
SCARB1-211ENST00000546215 ERVFC1P60507 584 aa22.47■■□□□ 1.19
SCARB1-211ENST00000546215 DLG4P78352 724 aa22.47■■□□□ 1.19
SCARB1-211ENST00000546215 DUOXA2Q1HG44 320 aa22.47■■□□□ 1.19
SCARB1-211ENST00000546215 FUT10Q6P4F1 479 aa22.47■■□□□ 1.19
SCARB1-211ENST00000546215 INTS8Q75QN2 995 aaKnown RBP22.47■■□□□ 1.19
SCARB1-211ENST00000546215 TAS1R1Q7RTX1 841 aa22.47■■□□□ 1.19
SCARB1-211ENST00000546215 VPS52Q8N1B4 723 aa22.47■■□□□ 1.19
SCARB1-211ENST00000546215 CSGALNACT2Q8N6G5 542 aa22.47■■□□□ 1.19
SCARB1-211ENST00000546215 CXorf38Q8TB03 319 aa22.47■■□□□ 1.19
SCARB1-211ENST00000546215 TMC2Q8TDI7 906 aa22.47■■□□□ 1.19
SCARB1-211ENST00000546215 CEP63Q96MT8 703 aa22.47■■□□□ 1.19
SCARB1-211ENST00000546215 TLR9Q9NR96 1032 aa22.47■■□□□ 1.19
SCARB1-211ENST00000546215 MTCH2Q9Y6C9 303 aa22.47■■□□□ 1.19
SCARB1-211ENST00000546215 SLC16A3O15427 465 aaKnown RBP22.46■■□□□ 1.19
SCARB1-211ENST00000546215 TMEM191BP0C7N4 346 aa22.46■■□□□ 1.19
SCARB1-211ENST00000546215 EPB41P11171 864 aaKnown RBP22.46■■□□□ 1.19
SCARB1-211ENST00000546215 ERCC5P28715 1186 aaPredicted RBP22.46■■□□□ 1.19
SCARB1-211ENST00000546215 IRS1P35568 1242 aa22.46■■□□□ 1.19
SCARB1-211ENST00000546215 PTPROQ16827 1216 aa22.46■■□□□ 1.19
SCARB1-211ENST00000546215 CT47A1Q5JQC4 288 aaPredicted RBP22.46■■□□□ 1.19
SCARB1-211ENST00000546215 SCARA3Q6AZY7 606 aa22.46■■□□□ 1.19
SCARB1-211ENST00000546215 FILIP1Q7Z7B0 1213 aa22.46■■□□□ 1.19
SCARB1-211ENST00000546215 ANKRD36BP1Q96IX9 119 aa22.46■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms