RNA–Protein interactions for RNA: ENST00000546039.5

PAAF1-216, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 3

Gene PAAF1, Length 805 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-216ENST00000546039 CWH43Q9H720 699 aa11.64□□□□□ -0.55
PAAF1-216ENST00000546039 NRDE2Q9H7Z3 1164 aa11.64□□□□□ -0.55
PAAF1-216ENST00000546039 TUBGCP4Q9UGJ1 667 aa11.64□□□□□ -0.55
PAAF1-216ENST00000546039 ITGA11Q9UKX5 1188 aa11.64□□□□□ -0.55
PAAF1-216ENST00000546039 RWDD3Q9Y3V2 267 aa11.64□□□□□ -0.55
PAAF1-216ENST00000546039 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.64□□□□□ -0.55
PAAF1-216ENST00000546039 GRXCR1A8MXD5 290 aa11.63□□□□□ -0.55
PAAF1-216ENST00000546039 ZC3H11AO75152 810 aaKnown RBP eCLIP11.63□□□□□ -0.55
PAAF1-216ENST00000546039 AFPP02771 609 aaKnown RBP11.63□□□□□ -0.55
PAAF1-216ENST00000546039 PRKCSHP14314 528 aaPredicted RBP11.63□□□□□ -0.55
PAAF1-216ENST00000546039 CDK11BP21127 795 aaKnown RBP11.63□□□□□ -0.55
PAAF1-216ENST00000546039 RPL9P32969 192 aaKnown RBP11.63□□□□□ -0.55
PAAF1-216ENST00000546039 MXI1P50539 228 aa11.63□□□□□ -0.55
PAAF1-216ENST00000546039 RABGGTBP53611 331 aa11.63□□□□□ -0.55
PAAF1-216ENST00000546039 SOX4Q06945 474 aaPredicted RBP11.63□□□□□ -0.55
PAAF1-216ENST00000546039 BIRC3Q13489 604 aa11.63□□□□□ -0.55
PAAF1-216ENST00000546039 HSP90AA4PQ58FG1 418 aa11.63□□□□□ -0.55
PAAF1-216ENST00000546039 C1orf220Q5T0J3 134 aa11.63□□□□□ -0.55
PAAF1-216ENST00000546039 SPOUT1Q5T280 376 aaKnown RBP11.63□□□□□ -0.55
PAAF1-216ENST00000546039 TRAPPC11Q7Z392 1133 aa11.63□□□□□ -0.55
PAAF1-216ENST00000546039 CREBRFQ8IUR6 639 aa11.63□□□□□ -0.55
PAAF1-216ENST00000546039 COLGALT2Q8IYK4 626 aa11.63□□□□□ -0.55
PAAF1-216ENST00000546039 C1orf127Q8N9H9 656 aa11.63□□□□□ -0.55
PAAF1-216ENST00000546039 OR5B17Q8NGF7 314 aa11.63□□□□□ -0.55
PAAF1-216ENST00000546039 C18orf25Q96B23 403 aaPredicted RBP11.63□□□□□ -0.55
PAAF1-216ENST00000546039 DDX27Q96GQ7 796 aaKnown RBP11.63□□□□□ -0.55
PAAF1-216ENST00000546039 ZNF560Q96MR9 790 aa11.63□□□□□ -0.55
PAAF1-216ENST00000546039 POP1Q99575 1024 aaKnown RBP11.63□□□□□ -0.55
PAAF1-216ENST00000546039 TUBGCP2Q9BSJ2 902 aa11.63□□□□□ -0.55
PAAF1-216ENST00000546039 TMEM8AQ9HCN3 771 aa11.63□□□□□ -0.55
PAAF1-216ENST00000546039 AAASQ9NRG9 546 aa11.63□□□□□ -0.55
PAAF1-216ENST00000546039 DPP3Q9NY33 737 aa11.63□□□□□ -0.55
PAAF1-216ENST00000546039 LIMA1Q9UHB6 759 aaKnown RBP11.63□□□□□ -0.55
PAAF1-216ENST00000546039 MSRAQ9UJ68 235 aa11.63□□□□□ -0.55
PAAF1-216ENST00000546039 MRPL42Q9Y6G3 142 aaKnown RBP11.63□□□□□ -0.55
PAAF1-216ENST00000546039 MYH10P35580 1976 aa11.62□□□□□ -0.55
PAAF1-216ENST00000546039 CASTOR2A6NHX0 329 aa11.62□□□□□ -0.55
PAAF1-216ENST00000546039 TMEM189-UBE2V1I3L0A0 370 aa11.62□□□□□ -0.55
PAAF1-216ENST00000546039 PMM2O15305 246 aa11.62□□□□□ -0.55
PAAF1-216ENST00000546039 P4HA2O15460 535 aa11.62□□□□□ -0.55
PAAF1-216ENST00000546039 B4GALT3O60512 393 aa11.62□□□□□ -0.55
PAAF1-216ENST00000546039 PHACTR2O75167 634 aa11.62□□□□□ -0.55
PAAF1-216ENST00000546039 DDHD2O94830 711 aa11.62□□□□□ -0.55
PAAF1-216ENST00000546039 SLC34A2O95436 690 aa11.62□□□□□ -0.55
PAAF1-216ENST00000546039 C4BPAP04003 597 aaKnown RBP11.62□□□□□ -0.55
PAAF1-216ENST00000546039 PAX3P23760 479 aa11.62□□□□□ -0.55
PAAF1-216ENST00000546039 GCLMP48507 274 aa11.62□□□□□ -0.55
PAAF1-216ENST00000546039 FMO5P49326 533 aa11.62□□□□□ -0.55
PAAF1-216ENST00000546039 GUCY2FP51841 1108 aa11.62□□□□□ -0.55
PAAF1-216ENST00000546039 SMAD3P84022 425 aaKnown RBP11.62□□□□□ -0.55
PAAF1-216ENST00000546039 MYL7Q01449 175 aa11.62□□□□□ -0.55
PAAF1-216ENST00000546039 PPP3CAQ08209 521 aa11.62□□□□□ -0.55
PAAF1-216ENST00000546039 KCNH2Q12809 1159 aa11.62□□□□□ -0.55
PAAF1-216ENST00000546039 KRT31Q15323 416 aa11.62□□□□□ -0.55
PAAF1-216ENST00000546039 ZACNQ401N2 412 aa11.62□□□□□ -0.55
PAAF1-216ENST00000546039 TDRD10Q5VZ19 366 aaKnown RBP11.62□□□□□ -0.55
PAAF1-216ENST00000546039 KRT39Q6A163 491 aa11.62□□□□□ -0.55
PAAF1-216ENST00000546039 C15orf39Q6ZRI6 1047 aa11.62□□□□□ -0.55
PAAF1-216ENST00000546039 SV2AQ7L0J3 742 aa11.62□□□□□ -0.55
PAAF1-216ENST00000546039 ZNF280BQ86YH2 543 aa11.62□□□□□ -0.55
PAAF1-216ENST00000546039 LRRC52Q8N7C0 313 aa11.62□□□□□ -0.55
PAAF1-216ENST00000546039 COLGALT1Q8NBJ5 622 aa11.62□□□□□ -0.55
PAAF1-216ENST00000546039 RNF214Q8ND24 703 aa11.62□□□□□ -0.55
PAAF1-216ENST00000546039 ZNF516Q92618 1163 aa11.62□□□□□ -0.55
PAAF1-216ENST00000546039 CLP1Q92989 425 aaKnown RBP11.62□□□□□ -0.55
PAAF1-216ENST00000546039 ZNF558Q96NG5 402 aa11.62□□□□□ -0.55
PAAF1-216ENST00000546039 SAMD11Q96NU1 681 aa11.62□□□□□ -0.55
PAAF1-216ENST00000546039 PBX4Q9BYU1 374 aa11.62□□□□□ -0.55
PAAF1-216ENST00000546039 MMRN2Q9H8L6 949 aa11.62□□□□□ -0.55
PAAF1-216ENST00000546039 GOLGA2P5Q9HBQ8 144 aa11.62□□□□□ -0.55
PAAF1-216ENST00000546039 HCSTQ9UBK5 93 aa11.62□□□□□ -0.55
PAAF1-216ENST00000546039 DNAJB4Q9UDY4 337 aa11.62□□□□□ -0.55
PAAF1-216ENST00000546039 R3HCC1Q9Y3T6 440 aaKnown RBP11.62□□□□□ -0.55
PAAF1-216ENST00000546039 ANO9A1A5B4 782 aa11.61□□□□□ -0.55
PAAF1-216ENST00000546039 LCHNA4D1U4 455 aa11.61□□□□□ -0.55
PAAF1-216ENST00000546039 LINC01553A4QN01 128 aa11.61□□□□□ -0.55
PAAF1-216ENST00000546039 PODXLO00592 558 aa11.61□□□□□ -0.55
PAAF1-216ENST00000546039 ITGB3P05106 788 aa11.61□□□□□ -0.55
PAAF1-216ENST00000546039 CA3P07451 260 aa11.61□□□□□ -0.55
PAAF1-216ENST00000546039 GALTP07902 379 aa11.61□□□□□ -0.55
PAAF1-216ENST00000546039 ATP1A3P13637 1013 aa11.61□□□□□ -0.55
PAAF1-216ENST00000546039 POLR2BP30876 1174 aaKnown RBP11.61□□□□□ -0.55
PAAF1-216ENST00000546039 PPM1AP35813 382 aa11.61□□□□□ -0.55
PAAF1-216ENST00000546039 PNPLA4P41247 253 aa11.61□□□□□ -0.55
PAAF1-216ENST00000546039 PIK3CAP42336 1068 aa11.61□□□□□ -0.55
PAAF1-216ENST00000546039 OR1G1P47890 313 aa11.61□□□□□ -0.55
PAAF1-216ENST00000546039 SLC11A1P49279 550 aa11.61□□□□□ -0.55
PAAF1-216ENST00000546039 ALDH7A1P49419 539 aaKnown RBP11.61□□□□□ -0.55
PAAF1-216ENST00000546039 COPB1P53618 953 aaKnown RBP11.61□□□□□ -0.55
PAAF1-216ENST00000546039 BCAR1P56945 870 aa11.61□□□□□ -0.55
PAAF1-216ENST00000546039 RBP5P82980 135 aa11.61□□□□□ -0.55
PAAF1-216ENST00000546039 CETN1Q12798 172 aa11.61□□□□□ -0.55
PAAF1-216ENST00000546039 TRPC3Q13507 836 aa11.61□□□□□ -0.55
PAAF1-216ENST00000546039 UPP1Q16831 310 aa11.61□□□□□ -0.55
PAAF1-216ENST00000546039 LRIT3Q3SXY7 679 aa11.61□□□□□ -0.55
PAAF1-216ENST00000546039 VWA3BQ502W6 1294 aa11.61□□□□□ -0.55
PAAF1-216ENST00000546039 C9orf57Q5W0N0 161 aa11.61□□□□□ -0.55
PAAF1-216ENST00000546039 KCNT2Q6UVM3 1135 aa11.61□□□□□ -0.55
PAAF1-216ENST00000546039 FAM84AQ96KN4 292 aa11.61□□□□□ -0.55
PAAF1-216ENST00000546039 COLEC11Q9BWP8 271 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms