RNA–Protein interactions for RNA: ENST00000544506.1

LEMD3-205, Transcript of LEM domain containing 3, human

TSL 5

Gene LEMD3, Length 412 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LEMD3-205	ENST00000544506	ARIH2	O95376	493 aa		6.74	□□□□□ -1.33
LEMD3-205	ENST00000544506	HMGB1	P09429	215 aa	Known RBP	6.74	□□□□□ -1.33
LEMD3-205	ENST00000544506	ATF3	P18847	181 aa		6.74	□□□□□ -1.33
LEMD3-205	ENST00000544506	RNASE9	P60153	205 aa	Known RBP	6.74	□□□□□ -1.33
LEMD3-205	ENST00000544506	CCDC157	Q569K6	752 aa		6.74	□□□□□ -1.33
LEMD3-205	ENST00000544506	RABL3	Q5HYI8	236 aa		6.74	□□□□□ -1.33
LEMD3-205	ENST00000544506	FAM102A	Q5T9C2	384 aa	Predicted RBP	6.74	□□□□□ -1.33
LEMD3-205	ENST00000544506	METRNL	Q641Q3	311 aa		6.74	□□□□□ -1.33
LEMD3-205	ENST00000544506	SPRED1	Q7Z699	444 aa		6.74	□□□□□ -1.33
LEMD3-205	ENST00000544506	TTC8	Q8TAM2	541 aa		6.74	□□□□□ -1.33
LEMD3-205	ENST00000544506	PACSIN1	Q9BY11	444 aa		6.74	□□□□□ -1.33
LEMD3-205	ENST00000544506	GABBR1	Q9UBS5	961 aa		6.74	□□□□□ -1.33
LEMD3-205	ENST00000544506	FEZ2	Q9UHY8	353 aa	Predicted RBP	6.74	□□□□□ -1.33
LEMD3-205	ENST00000544506	STXBP5L	Q9Y2K9	1186 aa		6.74	□□□□□ -1.33
LEMD3-205	ENST00000544506	GOLGA6C	A6NDK9	693 aa		6.73	□□□□□ -1.33
LEMD3-205	ENST00000544506	GOLGA6B	A6NDN3	693 aa		6.73	□□□□□ -1.33
LEMD3-205	ENST00000544506	ERC2	O15083	957 aa		6.73	□□□□□ -1.33
LEMD3-205	ENST00000544506	CTNND1	O60716	968 aa	Known RBP	6.73	□□□□□ -1.33
LEMD3-205	ENST00000544506	UBXN7	O94888	489 aa		6.73	□□□□□ -1.33
LEMD3-205	ENST00000544506	PRSS23	O95084	383 aa		6.73	□□□□□ -1.33
LEMD3-205	ENST00000544506	SCAF4	O95104	1147 aa	Known RBP	6.73	□□□□□ -1.33
LEMD3-205	ENST00000544506	C1S	P09871	688 aa		6.73	□□□□□ -1.33
LEMD3-205	ENST00000544506	GOLGA6D	P0CG33	693 aa		6.73	□□□□□ -1.33
LEMD3-205	ENST00000544506	SMARCA1	P28370	1054 aa		6.73	□□□□□ -1.33
LEMD3-205	ENST00000544506	IL12RB1	P42701	662 aa		6.73	□□□□□ -1.33
LEMD3-205	ENST00000544506	GFOD2	Q3B7J2	385 aa		6.73	□□□□□ -1.33
LEMD3-205	ENST00000544506	FLYWCH1	Q4VC44	716 aa		6.73	□□□□□ -1.33
LEMD3-205	ENST00000544506	IL17RD	Q8NFM7	739 aa		6.73	□□□□□ -1.33
LEMD3-205	ENST00000544506	NLGN4Y	Q8NFZ3	816 aa	Predicted RBP	6.73	□□□□□ -1.33
LEMD3-205	ENST00000544506	CPT1C	Q8TCG5	803 aa		6.73	□□□□□ -1.33
LEMD3-205	ENST00000544506	CDK5RAP3	Q96JB5	506 aa		6.73	□□□□□ -1.33
LEMD3-205	ENST00000544506	DCLRE1C	Q96SD1	692 aa	Known RBP	6.73	□□□□□ -1.33
LEMD3-205	ENST00000544506	ZNF703	Q9H7S9	590 aa	Predicted RBP	6.73	□□□□□ -1.33
LEMD3-205	ENST00000544506	GOLGA6A	Q9NYA3	693 aa		6.73	□□□□□ -1.33
LEMD3-205	ENST00000544506	TRPM5	Q9NZQ8	1165 aa		6.73	□□□□□ -1.33
LEMD3-205	ENST00000544506	CHST2	Q9Y4C5	530 aa		6.73	□□□□□ -1.33
LEMD3-205	ENST00000544506	USP15	Q9Y4E8	981 aa	Predicted RBP	6.73	□□□□□ -1.33
LEMD3-205	ENST00000544506	KRTAP4-8	A0A0G2JLE6	195 aa		6.72	□□□□□ -1.33
LEMD3-205	ENST00000544506	VSTM5	A8MXK1	200 aa		6.72	□□□□□ -1.33
LEMD3-205	ENST00000544506	AHRR	A9YTQ3	701 aa		6.72	□□□□□ -1.33
LEMD3-205	ENST00000544506	ZNF185	O15231	689 aa		6.72	□□□□□ -1.33
LEMD3-205	ENST00000544506	RECQL4	O94761	1208 aa		6.72	□□□□□ -1.33
LEMD3-205	ENST00000544506	FTH1P19	P0C7X4	201 aa		6.72	□□□□□ -1.33
LEMD3-205	ENST00000544506	TYR	P14679	529 aa		6.72	□□□□□ -1.33
LEMD3-205	ENST00000544506	HTR1B	P28222	390 aa		6.72	□□□□□ -1.33
LEMD3-205	ENST00000544506	PRDX5	P30044	214 aa		6.72	□□□□□ -1.33
LEMD3-205	ENST00000544506	NKX6-1	P78426	367 aa	Predicted RBP	6.72	□□□□□ -1.33
LEMD3-205	ENST00000544506	SLC25A3	Q00325	362 aa		6.72	□□□□□ -1.33
LEMD3-205	ENST00000544506	ARHGAP29	Q52LW3	1261 aa		6.72	□□□□□ -1.33
LEMD3-205	ENST00000544506	AGAP9	Q5VTM2	703 aa		6.72	□□□□□ -1.33
LEMD3-205	ENST00000544506	OVCH2	Q7RTZ1	564 aa		6.72	□□□□□ -1.33
LEMD3-205	ENST00000544506	GDF7	Q7Z4P5	450 aa		6.72	□□□□□ -1.33
LEMD3-205	ENST00000544506	ZFPM1	Q8IX07	1006 aa		6.72	□□□□□ -1.33
LEMD3-205	ENST00000544506	SH2D3C	Q8N5H7	860 aa		6.72	□□□□□ -1.33
LEMD3-205	ENST00000544506	FITM2	Q8N6M3	262 aa		6.72	□□□□□ -1.33
LEMD3-205	ENST00000544506	KLHDC4	Q8TBB5	520 aa		6.72	□□□□□ -1.33
LEMD3-205	ENST00000544506	SLC35A4	Q96G79	324 aa		6.72	□□□□□ -1.33
LEMD3-205	ENST00000544506	FAM167A	Q96KS9	214 aa		6.72	□□□□□ -1.33
LEMD3-205	ENST00000544506	FAM193B	Q96PV7	902 aa	Predicted RBP	6.72	□□□□□ -1.33
LEMD3-205	ENST00000544506	LRFN3	Q9BTN0	628 aa		6.72	□□□□□ -1.33
LEMD3-205	ENST00000544506	C1orf43	Q9BWL3	253 aa		6.72	□□□□□ -1.33
LEMD3-205	ENST00000544506	ZNF768	Q9H5H4	540 aa	Known RBP	6.72	□□□□□ -1.33
LEMD3-205	ENST00000544506	WDCP	Q9H6R7	721 aa		6.72	□□□□□ -1.33
LEMD3-205	ENST00000544506	PARPBP	Q9NWS1	579 aa		6.72	□□□□□ -1.33
LEMD3-205	ENST00000544506	JKAMP	Q9P055	326 aa		6.72	□□□□□ -1.33
LEMD3-205	ENST00000544506	DIRC3	C9JPN6	131 aa		6.71	□□□□□ -1.34
LEMD3-205	ENST00000544506	B3GALT2	O43825	422 aa		6.71	□□□□□ -1.34
LEMD3-205	ENST00000544506	MARCH6	O60337	910 aa		6.71	□□□□□ -1.34
LEMD3-205	ENST00000544506	SLC43A1	O75387	559 aa		6.71	□□□□□ -1.34
LEMD3-205	ENST00000544506	DGCR2	P98153	550 aa		6.71	□□□□□ -1.34
LEMD3-205	ENST00000544506	PLS1	Q14651	629 aa		6.71	□□□□□ -1.34
LEMD3-205	ENST00000544506	PDCD4	Q53EL6	469 aa	Known RBP	6.71	□□□□□ -1.34
LEMD3-205	ENST00000544506	CCDC93	Q567U6	631 aa		6.71	□□□□□ -1.34
LEMD3-205	ENST00000544506	ZNF365	Q70YC5	407 aa		6.71	□□□□□ -1.34
LEMD3-205	ENST00000544506	FAM90A1	Q86YD7	464 aa		6.71	□□□□□ -1.34
LEMD3-205	ENST00000544506	RHOT2	Q8IXI1	618 aa		6.71	□□□□□ -1.34
LEMD3-205	ENST00000544506	PLBD2	Q8NHP8	589 aa		6.71	□□□□□ -1.34
LEMD3-205	ENST00000544506	TBC1D15	Q8TC07	691 aa		6.71	□□□□□ -1.34
LEMD3-205	ENST00000544506	CACTIN	Q8WUQ7	758 aa	Known RBP	6.71	□□□□□ -1.34
LEMD3-205	ENST00000544506	PLEKHG4B	Q96PX9	1271 aa		6.71	□□□□□ -1.34
LEMD3-205	ENST00000544506	TEX101	Q9BY14	249 aa		6.71	□□□□□ -1.34
LEMD3-205	ENST00000544506	C1orf112	Q9NSG2	853 aa		6.71	□□□□□ -1.34
LEMD3-205	ENST00000544506	PNPO	Q9NVS9	261 aa		6.71	□□□□□ -1.34
LEMD3-205	ENST00000544506	SIDT1	Q9NXL6	827 aa	Known RBP	6.71	□□□□□ -1.34
LEMD3-205	ENST00000544506	DDX20	Q9UHI6	824 aa	Known RBP	6.71	□□□□□ -1.34
LEMD3-205	ENST00000544506		H3BUI4	141 aa		6.7	□□□□□ -1.34
LEMD3-205	ENST00000544506	RPS6KA4	O75676	772 aa		6.7	□□□□□ -1.34
LEMD3-205	ENST00000544506	TUSC2	O75896	110 aa		6.7	□□□□□ -1.34
LEMD3-205	ENST00000544506	AGFG2	O95081	481 aa		6.7	□□□□□ -1.34
LEMD3-205	ENST00000544506	GCSH	P23434	173 aa		6.7	□□□□□ -1.34
LEMD3-205	ENST00000544506	PIK3CG	P48736	1102 aa		6.7	□□□□□ -1.34
LEMD3-205	ENST00000544506	RAB1A	P62820	205 aa		6.7	□□□□□ -1.34
LEMD3-205	ENST00000544506	NOMO3	P69849	1222 aa		6.7	□□□□□ -1.34
LEMD3-205	ENST00000544506	NOMO2	Q5JPE7	1267 aa		6.7	□□□□□ -1.34
LEMD3-205	ENST00000544506	UTP14C	Q5TAP6	766 aa	Known RBP	6.7	□□□□□ -1.34
LEMD3-205	ENST00000544506	TSHZ3	Q63HK5	1081 aa		6.7	□□□□□ -1.34
LEMD3-205	ENST00000544506	OR56A1	Q8NGH5	318 aa		6.7	□□□□□ -1.34
LEMD3-205	ENST00000544506	REXO4	Q9GZR2	422 aa	Known RBP	6.7	□□□□□ -1.34
LEMD3-205	ENST00000544506	ARMT1	Q9H993	441 aa		6.7	□□□□□ -1.34
LEMD3-205	ENST00000544506	KLHL11	Q9NVR0	708 aa		6.7	□□□□□ -1.34

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