RNA–Protein interactions for RNA: ENST00000544474.5

PDZD4-209, Transcript of PDZ domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene PDZD4, Length 3,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD4-209ENST00000544474 PSTPIP2Q9H939 334 aa13.6□□□□□ -0.23
PDZD4-209ENST00000544474 CYP4F11Q9HBI6 524 aa13.6□□□□□ -0.23
PDZD4-209ENST00000544474 COG5Q9UP83 839 aa13.6□□□□□ -0.23
PDZD4-209ENST00000544474 DNM3Q9UQ16 869 aa13.6□□□□□ -0.23
PDZD4-209ENST00000544474 DCCP43146 1447 aa13.59□□□□□ -0.23
PDZD4-209ENST00000544474 ESYT2A0FGR8 921 aa13.59□□□□□ -0.23
PDZD4-209ENST00000544474 CALUO43852 315 aaPredicted RBP13.59□□□□□ -0.23
PDZD4-209ENST00000544474 SP4Q02446 784 aa13.59□□□□□ -0.23
PDZD4-209ENST00000544474 TMEM119Q4V9L6 283 aa13.59□□□□□ -0.23
PDZD4-209ENST00000544474 ZNF333Q96JL9 665 aa13.59□□□□□ -0.23
PDZD4-209ENST00000544474 RILPQ96NA2 401 aa13.59□□□□□ -0.23
PDZD4-209ENST00000544474 REEP2Q9BRK0 252 aa13.59□□□□□ -0.23
PDZD4-209ENST00000544474 PCDH18Q9HCL0 1135 aa13.59□□□□□ -0.23
PDZD4-209ENST00000544474 ZNF711Q9Y462 761 aa13.59□□□□□ -0.23
PDZD4-209ENST00000544474 SPATA31A1Q5TZJ5 1347 aa13.59□□□□□ -0.23
PDZD4-209ENST00000544474 ZNF142P52746 1687 aaPredicted RBP13.59□□□□□ -0.23
PDZD4-209ENST00000544474 MAPK13O15264 365 aa13.59□□□□□ -0.23
PDZD4-209ENST00000544474 TRPA1O75762 1119 aa13.59□□□□□ -0.23
PDZD4-209ENST00000544474 GJB6O95452 261 aa13.59□□□□□ -0.23
PDZD4-209ENST00000544474 PLS3P13797 630 aa13.59□□□□□ -0.23
PDZD4-209ENST00000544474 CTNNA2P26232 953 aa13.59□□□□□ -0.23
PDZD4-209ENST00000544474 ZDHHC24Q6UX98 284 aa13.59□□□□□ -0.23
PDZD4-209ENST00000544474 DPP8Q6V1X1 898 aaPredicted RBP13.59□□□□□ -0.23
PDZD4-209ENST00000544474 PPP4R3CPQ6ZMV5 832 aa13.59□□□□□ -0.23
PDZD4-209ENST00000544474 TMEM110Q86TL2 294 aa13.59□□□□□ -0.23
PDZD4-209ENST00000544474 LRRC57Q8N9N7 239 aa13.59□□□□□ -0.23
PDZD4-209ENST00000544474 RFFLQ8WZ73 363 aa13.59□□□□□ -0.23
PDZD4-209ENST00000544474 CORO1BQ9BR76 489 aa13.59□□□□□ -0.23
PDZD4-209ENST00000544474 DBNDD1Q9H9R9 158 aa13.59□□□□□ -0.23
PDZD4-209ENST00000544474 ETNK2Q9NVF9 386 aa13.59□□□□□ -0.23
PDZD4-209ENST00000544474 SUCLA2Q9P2R7 463 aaPredicted RBP13.59□□□□□ -0.23
PDZD4-209ENST00000544474 PPP1R1BQ9UD71 204 aaPredicted RBP13.59□□□□□ -0.23
PDZD4-209ENST00000544474 USP17L10C9JJH3 530 aa13.58□□□□□ -0.23
PDZD4-209ENST00000544474 DNAJC6O75061 913 aa13.58□□□□□ -0.23
PDZD4-209ENST00000544474 CAPN15O75808 1086 aa13.58□□□□□ -0.23
PDZD4-209ENST00000544474 ENO1P06733 434 aaKnown RBP13.58□□□□□ -0.23
PDZD4-209ENST00000544474 ATP6V1B1P15313 513 aa13.58□□□□□ -0.23
PDZD4-209ENST00000544474 ALOX15P16050 662 aaPredicted RBP13.58□□□□□ -0.23
PDZD4-209ENST00000544474 PTENP60484 403 aa13.58□□□□□ -0.23
PDZD4-209ENST00000544474 COG7P83436 770 aa13.58□□□□□ -0.23
PDZD4-209ENST00000544474 KLRC3Q07444 240 aa13.58□□□□□ -0.23
PDZD4-209ENST00000544474 LSAMPQ13449 338 aa13.58□□□□□ -0.23
PDZD4-209ENST00000544474 SLC44A4Q53GD3 710 aa13.58□□□□□ -0.23
PDZD4-209ENST00000544474 TRAPPC3LQ5T215 181 aa13.58□□□□□ -0.23
PDZD4-209ENST00000544474 DUPD1Q68J44 220 aa13.58□□□□□ -0.23
PDZD4-209ENST00000544474 CLEC4GQ6UXB4 293 aa13.58□□□□□ -0.23
PDZD4-209ENST00000544474 NCCRP1Q6ZVX7 275 aaPredicted RBP13.58□□□□□ -0.23
PDZD4-209ENST00000544474 CYP2W1Q8TAV3 490 aa13.58□□□□□ -0.23
PDZD4-209ENST00000544474 USP21Q9UK80 565 aa13.58□□□□□ -0.23
PDZD4-209ENST00000544474 ZNF148Q9UQR1 794 aa13.58□□□□□ -0.23
PDZD4-209ENST00000544474 SH3GLB1Q9Y371 365 aa13.58□□□□□ -0.23
PDZD4-209ENST00000544474 CYP26A1O43174 497 aa13.58□□□□□ -0.24
PDZD4-209ENST00000544474 MED24O75448 989 aa13.58□□□□□ -0.24
PDZD4-209ENST00000544474 UNC5CO95185 931 aa13.58□□□□□ -0.24
PDZD4-209ENST00000544474 CD58P19256 250 aa13.58□□□□□ -0.24
PDZD4-209ENST00000544474 AGGF1Q8N302 714 aaeCLIP13.58□□□□□ -0.24
PDZD4-209ENST00000544474 USP6NLQ92738 828 aa13.58□□□□□ -0.24
PDZD4-209ENST00000544474 UTP4Q969X6 686 aaKnown RBP13.58□□□□□ -0.24
PDZD4-209ENST00000544474 CLIC5Q9NZA1 410 aa13.58□□□□□ -0.24
PDZD4-209ENST00000544474 PGM3O95394 542 aa13.58□□□□□ -0.24
PDZD4-209ENST00000544474 LMNAP02545 664 aaKnown RBP13.58□□□□□ -0.24
PDZD4-209ENST00000544474 ESRRAP11474 423 aaPredicted RBP13.58□□□□□ -0.24
PDZD4-209ENST00000544474 CETPP11597 493 aa13.58□□□□□ -0.24
PDZD4-209ENST00000544474 EDRF1Q3B7T1 1238 aa13.58□□□□□ -0.24
PDZD4-209ENST00000544474 PPP1R18Q6NYC8 613 aa13.58□□□□□ -0.24
PDZD4-209ENST00000544474 SLC35B4Q969S0 331 aa13.58□□□□□ -0.24
PDZD4-209ENST00000544474 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.58□□□□□ -0.24
PDZD4-209ENST00000544474 PLCH1Q4KWH8 1693 aa13.58□□□□□ -0.24
PDZD4-209ENST00000544474 hCG_1984214I3L0E3 225 aa13.57□□□□□ -0.24
PDZD4-209ENST00000544474 O00370 1275 aa13.57□□□□□ -0.24
PDZD4-209ENST00000544474 NEK3P51956 506 aa13.57□□□□□ -0.24
PDZD4-209ENST00000544474 STRN3Q13033 797 aa13.57□□□□□ -0.24
PDZD4-209ENST00000544474 PPP2R5EQ16537 467 aa13.57□□□□□ -0.24
PDZD4-209ENST00000544474 KNOP1Q1ED39 458 aaKnown RBP13.57□□□□□ -0.24
PDZD4-209ENST00000544474 LMBRD2Q68DH5 695 aaPredicted RBP13.57□□□□□ -0.24
PDZD4-209ENST00000544474 ZNF804AQ7Z570 1209 aa13.57□□□□□ -0.24
PDZD4-209ENST00000544474 SLF2Q8IX21 1173 aa13.57□□□□□ -0.24
PDZD4-209ENST00000544474 ZNF713Q8N859 430 aaPredicted RBP13.57□□□□□ -0.24
PDZD4-209ENST00000544474 ERMNQ8TAM6 284 aa13.57□□□□□ -0.24
PDZD4-209ENST00000544474 FBXO41Q8TF61 875 aa13.57□□□□□ -0.24
PDZD4-209ENST00000544474 LENG1Q96BZ8 264 aaPredicted RBP13.57□□□□□ -0.24
PDZD4-209ENST00000544474 NYXQ9GZU5 481 aa13.57□□□□□ -0.24
PDZD4-209ENST00000544474 DCLRE1BQ9H816 532 aa13.57□□□□□ -0.24
PDZD4-209ENST00000544474 METTL14Q9HCE5 456 aaKnown RBP13.57□□□□□ -0.24
PDZD4-209ENST00000544474 FRMD4BQ9Y2L6 1034 aa13.57□□□□□ -0.24
PDZD4-209ENST00000544474 E2F8A0AVK6 867 aa13.57□□□□□ -0.24
PDZD4-209ENST00000544474 SKIV2L2P42285 1042 aaKnown RBP13.57□□□□□ -0.24
PDZD4-209ENST00000544474 PKN2Q16513 984 aaKnown RBP13.57□□□□□ -0.24
PDZD4-209ENST00000544474 PARP6Q2NL67 630 aa13.57□□□□□ -0.24
PDZD4-209ENST00000544474 EML3Q32P44 896 aa13.57□□□□□ -0.24
PDZD4-209ENST00000544474 CBWD6Q4V339 395 aa13.57□□□□□ -0.24
PDZD4-209ENST00000544474 ASPRV1Q53RT3 343 aa13.57□□□□□ -0.24
PDZD4-209ENST00000544474 CBWD3Q5JTY5 395 aa13.57□□□□□ -0.24
PDZD4-209ENST00000544474 CBWD5Q5RIA9 395 aa13.57□□□□□ -0.24
PDZD4-209ENST00000544474 FRMD5Q7Z6J6 570 aa13.57□□□□□ -0.24
PDZD4-209ENST00000544474 ZNF554Q86TJ5 538 aa13.57□□□□□ -0.24
PDZD4-209ENST00000544474 MAP7D3Q8IWC1 876 aa13.57□□□□□ -0.24
PDZD4-209ENST00000544474 CTAGE3PQ8IX95 158 aa13.57□□□□□ -0.24
PDZD4-209ENST00000544474 NUP85Q9BW27 656 aa13.57□□□□□ -0.24
PDZD4-209ENST00000544474 HEY2Q9UBP5 337 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms