RNA–Protein interactions for RNA: ENST00000543768.1

SCNN1A-221, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SCNN1A, Length 2,361 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-221ENST00000543768 NEDD9Q14511 834 aa17.2■□□□□ 0.34
SCNN1A-221ENST00000543768 NCAPG2Q86XI2 1143 aa17.2■□□□□ 0.34
SCNN1A-221ENST00000543768 OR5B17Q8NGF7 314 aa17.2■□□□□ 0.34
SCNN1A-221ENST00000543768 CGRRF1Q99675 332 aa17.2■□□□□ 0.34
SCNN1A-221ENST00000543768 EPB41L4BQ9H329 900 aa17.2■□□□□ 0.34
SCNN1A-221ENST00000543768 CENPHQ9H3R5 247 aa17.2■□□□□ 0.34
SCNN1A-221ENST00000543768 MAFO75444 373 aaPredicted RBP17.19■□□□□ 0.34
SCNN1A-221ENST00000543768 RPL21P46778 160 aaKnown RBP17.19■□□□□ 0.34
SCNN1A-221ENST00000543768 SKIDA1Q1XH10 827 aa17.19■□□□□ 0.34
SCNN1A-221ENST00000543768 SEZ6Q53EL9 994 aa17.19■□□□□ 0.34
SCNN1A-221ENST00000543768 C2CD6Q53TS8 623 aa17.19■□□□□ 0.34
SCNN1A-221ENST00000543768 SCARA3Q6AZY7 606 aa17.19■□□□□ 0.34
SCNN1A-221ENST00000543768 LLGL2Q6P1M3 1020 aa17.19■□□□□ 0.34
SCNN1A-221ENST00000543768 RUFY4Q6ZNE9 571 aa17.19■□□□□ 0.34
SCNN1A-221ENST00000543768 MON1BQ7L1V2 547 aa17.19■□□□□ 0.34
SCNN1A-221ENST00000543768 PACS2Q86VP3 889 aa17.19■□□□□ 0.34
SCNN1A-221ENST00000543768 RABEP2Q9H5N1 569 aa17.19■□□□□ 0.34
SCNN1A-221ENST00000543768 LRRC4CQ9HCJ2 640 aa17.19■□□□□ 0.34
SCNN1A-221ENST00000543768 MTUS1Q9ULD2 1270 aa17.19■□□□□ 0.34
SCNN1A-221ENST00000543768 MYBL1P10243 752 aa17.18■□□□□ 0.34
SCNN1A-221ENST00000543768 TGFB3P10600 412 aa17.18■□□□□ 0.34
SCNN1A-221ENST00000543768 TCF7P36402 384 aaPredicted RBP17.18■□□□□ 0.34
SCNN1A-221ENST00000543768 LY6KQ17RY6 165 aa17.18■□□□□ 0.34
SCNN1A-221ENST00000543768 PHLDB2Q86SQ0 1253 aa17.18■□□□□ 0.34
SCNN1A-221ENST00000543768 C12orf50Q8NA57 414 aaPredicted RBP17.18■□□□□ 0.34
SCNN1A-221ENST00000543768 SEPT1Q8WYJ6 367 aa17.18■□□□□ 0.34
SCNN1A-221ENST00000543768 CNTN6Q9UQ52 1028 aa17.18■□□□□ 0.34
SCNN1A-221ENST00000543768 NUB1Q9Y5A7 615 aa17.18■□□□□ 0.34
SCNN1A-221ENST00000543768 UMODL1Q5DID0 1318 aa17.18■□□□□ 0.34
SCNN1A-221ENST00000543768 FSCN2O14926 492 aa17.18■□□□□ 0.34
SCNN1A-221ENST00000543768 CLDN3O15551 220 aa17.18■□□□□ 0.34
SCNN1A-221ENST00000543768 CLTAP09496 248 aa17.18■□□□□ 0.34
SCNN1A-221ENST00000543768 LSP1P33241 339 aa17.18■□□□□ 0.34
SCNN1A-221ENST00000543768 KCNJ1P48048 391 aa17.18■□□□□ 0.34
SCNN1A-221ENST00000543768 AGBL2Q5U5Z8 902 aa17.18■□□□□ 0.34
SCNN1A-221ENST00000543768 FAM160B1Q5W0V3 765 aa17.18■□□□□ 0.34
SCNN1A-221ENST00000543768 GADL1Q6ZQY3 521 aa17.18■□□□□ 0.34
SCNN1A-221ENST00000543768 EEPD1Q7L9B9 569 aa17.18■□□□□ 0.34
SCNN1A-221ENST00000543768 CCDC125Q86Z20 511 aa17.18■□□□□ 0.34
SCNN1A-221ENST00000543768 LRRC19Q9H756 370 aa17.18■□□□□ 0.34
SCNN1A-221ENST00000543768 PCDHB4Q9Y5E5 795 aa17.18■□□□□ 0.34
SCNN1A-221ENST00000543768 CSADQ9Y600 493 aa17.18■□□□□ 0.34
SCNN1A-221ENST00000543768 IRF6O14896 467 aa17.17■□□□□ 0.34
SCNN1A-221ENST00000543768 ERLIN2O94905 339 aa17.17■□□□□ 0.34
SCNN1A-221ENST00000543768 MDH1P40925 334 aaKnown RBP17.17■□□□□ 0.34
SCNN1A-221ENST00000543768 NSFP46459 744 aaKnown RBP17.17■□□□□ 0.34
SCNN1A-221ENST00000543768 CCT5P48643 541 aa17.17■□□□□ 0.34
SCNN1A-221ENST00000543768 NOP14P78316 857 aaKnown RBP17.17■□□□□ 0.34
SCNN1A-221ENST00000543768 TMEM270Q6UE05 265 aa17.17■□□□□ 0.34
SCNN1A-221ENST00000543768 METTL7BQ6UX53 244 aa17.17■□□□□ 0.34
SCNN1A-221ENST00000543768 CCDC105Q8IYK2 499 aa17.17■□□□□ 0.34
SCNN1A-221ENST00000543768 ABRAQ8N0Z2 381 aa17.17■□□□□ 0.34
SCNN1A-221ENST00000543768 PRPF31Q8WWY3 499 aaKnown RBP17.17■□□□□ 0.34
SCNN1A-221ENST00000543768 TRIM11Q96F44 468 aa17.17■□□□□ 0.34
SCNN1A-221ENST00000543768 SBF1O95248 1867 aa17.17■□□□□ 0.34
SCNN1A-221ENST00000543768 ZEB2O60315 1214 aa17.17■□□□□ 0.34
SCNN1A-221ENST00000543768 FAM189A1O60320 539 aa17.17■□□□□ 0.34
SCNN1A-221ENST00000543768 MSCO60682 206 aa17.17■□□□□ 0.34
SCNN1A-221ENST00000543768 CNMDO75829 334 aa17.17■□□□□ 0.34
SCNN1A-221ENST00000543768 HPDP32754 393 aaPredicted RBP17.17■□□□□ 0.34
SCNN1A-221ENST00000543768 FNTAP49354 379 aa17.17■□□□□ 0.34
SCNN1A-221ENST00000543768 NOMO3P69849 1222 aa17.17■□□□□ 0.34
SCNN1A-221ENST00000543768 LLGL1Q15334 1064 aa17.17■□□□□ 0.34
SCNN1A-221ENST00000543768 ZPBP2Q6X784 338 aa17.17■□□□□ 0.34
SCNN1A-221ENST00000543768 RUNDC3BQ96NL0 473 aa17.17■□□□□ 0.34
SCNN1A-221ENST00000543768 PAGR1Q9BTK6 254 aa17.17■□□□□ 0.34
SCNN1A-221ENST00000543768 A0A0G2JLL6 359 aaPredicted RBP17.16■□□□□ 0.34
SCNN1A-221ENST00000543768 ADM5C9JUS6 153 aa17.16■□□□□ 0.34
SCNN1A-221ENST00000543768 SOCS7O14512 581 aa17.16■□□□□ 0.34
SCNN1A-221ENST00000543768 DDNO94850 711 aaPredicted RBP17.16■□□□□ 0.34
SCNN1A-221ENST00000543768 ARIH2O95376 493 aa17.16■□□□□ 0.34
SCNN1A-221ENST00000543768 HARSP12081 509 aaKnown RBP17.16■□□□□ 0.34
SCNN1A-221ENST00000543768 GNA15P30679 374 aa17.16■□□□□ 0.34
SCNN1A-221ENST00000543768 TNFSF9P41273 254 aa17.16■□□□□ 0.34
SCNN1A-221ENST00000543768 SLC1A1P43005 524 aa17.16■□□□□ 0.34
SCNN1A-221ENST00000543768 PMS2P54278 862 aa17.16■□□□□ 0.34
SCNN1A-221ENST00000543768 CORO7P57737 925 aa17.16■□□□□ 0.34
SCNN1A-221ENST00000543768 PRRT2Q7Z6L0 340 aaPredicted RBP17.16■□□□□ 0.34
SCNN1A-221ENST00000543768 PPM1EQ8WY54 764 aa17.16■□□□□ 0.34
SCNN1A-221ENST00000543768 PABPC3Q9H361 631 aaKnown RBP17.16■□□□□ 0.34
SCNN1A-221ENST00000543768 CST3P01034 146 aaPredicted RBP17.16■□□□□ 0.34
SCNN1A-221ENST00000543768 NUDT17P0C025 328 aa17.16■□□□□ 0.34
SCNN1A-221ENST00000543768 TBXAS1P24557 533 aaPredicted RBP17.16■□□□□ 0.34
SCNN1A-221ENST00000543768 GBP1P32455 592 aa17.16■□□□□ 0.34
SCNN1A-221ENST00000543768 EIF3BP55884 814 aaKnown RBP17.16■□□□□ 0.34
SCNN1A-221ENST00000543768 MKRN4PQ13434 485 aaPredicted RBP17.16■□□□□ 0.34
SCNN1A-221ENST00000543768 NCOA4Q13772 614 aa17.16■□□□□ 0.34
SCNN1A-221ENST00000543768 TRIM72Q6ZMU5 477 aa17.16■□□□□ 0.34
SCNN1A-221ENST00000543768 PASD1Q8IV76 773 aa17.16■□□□□ 0.34
SCNN1A-221ENST00000543768 BRSK2Q8IWQ3 736 aa17.16■□□□□ 0.34
SCNN1A-221ENST00000543768 RNF25Q96BH1 459 aaPredicted RBP17.16■□□□□ 0.34
SCNN1A-221ENST00000543768 DDX27Q96GQ7 796 aaKnown RBP17.16■□□□□ 0.34
SCNN1A-221ENST00000543768 FGD4Q96M96 766 aa17.16■□□□□ 0.34
SCNN1A-221ENST00000543768 HERPUD2Q9BSE4 406 aa17.16■□□□□ 0.34
SCNN1A-221ENST00000543768 PLVAPQ9BX97 442 aa17.16■□□□□ 0.34
SCNN1A-221ENST00000543768 CCDC113Q9H0I3 377 aa17.16■□□□□ 0.34
SCNN1A-221ENST00000543768 ASCC2Q9H1I8 757 aaPredicted RBP17.16■□□□□ 0.34
SCNN1A-221ENST00000543768 BCCIPQ9P287 314 aaKnown RBP eCLIP17.16■□□□□ 0.34
SCNN1A-221ENST00000543768 SLC12A6Q9UHW9 1150 aa17.16■□□□□ 0.34
SCNN1A-221ENST00000543768 PTPN22Q9Y2R2 807 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms