RNA–Protein interactions for RNA: ENST00000542866.2

KDM3B-209, Transcript of lysine demethylase 3B, humanhuman

TSL 2 BASIC

Gene KDM3B, Length 3,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-209ENST00000542866 ZNF341Q9BYN7 854 aa5.65□□□□□ -1.5
KDM3B-209ENST00000542866 TMEM39BQ9GZU3 492 aa5.65□□□□□ -1.5
KDM3B-209ENST00000542866 WNT8AQ9H1J5 351 aa5.65□□□□□ -1.5
KDM3B-209ENST00000542866 VCXQ9H320 206 aa5.65□□□□□ -1.5
KDM3B-209ENST00000542866 PCIF1Q9H4Z3 704 aa5.65□□□□□ -1.5
KDM3B-209ENST00000542866 AAASQ9NRG9 546 aa5.65□□□□□ -1.5
KDM3B-209ENST00000542866 CHKBQ9Y259 395 aa5.65□□□□□ -1.5
KDM3B-209ENST00000542866 RABGAP1Q9Y3P9 1069 aa5.65□□□□□ -1.5
KDM3B-209ENST00000542866 C2CD2Q9Y426 696 aa5.65□□□□□ -1.5
KDM3B-209ENST00000542866 LRRC42Q9Y546 428 aa5.65□□□□□ -1.5
KDM3B-209ENST00000542866 USH1CQ9Y6N9 552 aa5.65□□□□□ -1.5
KDM3B-209ENST00000542866 TAF1P21675 1872 aa5.65□□□□□ -1.51
KDM3B-209ENST00000542866 GTPBP10A4D1E9 387 aaKnown RBP5.65□□□□□ -1.51
KDM3B-209ENST00000542866 WDR91A4D1P6 747 aa5.65□□□□□ -1.51
KDM3B-209ENST00000542866 FZD9O00144 591 aa5.65□□□□□ -1.51
KDM3B-209ENST00000542866 ZBTB5O15062 677 aa5.65□□□□□ -1.51
KDM3B-209ENST00000542866 MAP3K13O43283 966 aa5.65□□□□□ -1.51
KDM3B-209ENST00000542866 ATP5HO75947 161 aa5.65□□□□□ -1.51
KDM3B-209ENST00000542866 WFS1O76024 890 aa5.65□□□□□ -1.51
KDM3B-209ENST00000542866 GGPS1O95749 300 aa5.65□□□□□ -1.51
KDM3B-209ENST00000542866 GM2AP17900 193 aa5.65□□□□□ -1.51
KDM3B-209ENST00000542866 GJC1P36383 396 aa5.65□□□□□ -1.51
KDM3B-209ENST00000542866 RAB27AP51159 221 aa5.65□□□□□ -1.51
KDM3B-209ENST00000542866 ANKRD35Q8N283 1001 aa5.65□□□□□ -1.51
KDM3B-209ENST00000542866 C2orf69Q8N8R5 385 aa5.65□□□□□ -1.51
KDM3B-209ENST00000542866 ZNF564Q8TBZ8 553 aaPredicted RBP5.65□□□□□ -1.51
KDM3B-209ENST00000542866 LRRC8CQ8TDW0 803 aa5.65□□□□□ -1.51
KDM3B-209ENST00000542866 ZNF653Q96CK0 615 aa5.65□□□□□ -1.51
KDM3B-209ENST00000542866 GRAMD1AQ96CP6 724 aa5.65□□□□□ -1.51
KDM3B-209ENST00000542866 HEMGNQ9BXL5 484 aa5.65□□□□□ -1.51
KDM3B-209ENST00000542866 TRIM4Q9C037 500 aa5.65□□□□□ -1.51
KDM3B-209ENST00000542866 METTL5Q9NRN9 209 aaKnown RBP5.65□□□□□ -1.51
KDM3B-209ENST00000542866 CHST7Q9NS84 486 aa5.65□□□□□ -1.51
KDM3B-209ENST00000542866 IRAK4Q9NWZ3 460 aa5.65□□□□□ -1.51
KDM3B-209ENST00000542866 NINJ2Q9NZG7 142 aa5.65□□□□□ -1.51
KDM3B-209ENST00000542866 COL5A3P25940 1745 aaPredicted RBP5.65□□□□□ -1.51
KDM3B-209ENST00000542866 ZNF831Q5JPB2 1677 aa5.65□□□□□ -1.51
KDM3B-209ENST00000542866 ROBO3Q96MS0 1386 aa5.65□□□□□ -1.51
KDM3B-209ENST00000542866 GAKO14976 1311 aa5.65□□□□□ -1.51
KDM3B-209ENST00000542866 ZBTB39O15060 712 aa5.65□□□□□ -1.51
KDM3B-209ENST00000542866 GH2P01242 217 aa5.65□□□□□ -1.51
KDM3B-209ENST00000542866 SPATA31C1P0DKV0 1188 aa5.65□□□□□ -1.51
KDM3B-209ENST00000542866 ALAS1P13196 640 aa5.65□□□□□ -1.51
KDM3B-209ENST00000542866 CHRNB2P17787 502 aa5.65□□□□□ -1.51
KDM3B-209ENST00000542866 ITIH2P19823 946 aa5.65□□□□□ -1.51
KDM3B-209ENST00000542866 RPA1P27694 616 aa5.65□□□□□ -1.51
KDM3B-209ENST00000542866 SKIV2L2P42285 1042 aaKnown RBP5.65□□□□□ -1.51
KDM3B-209ENST00000542866 CLK2P49760 499 aaKnown RBP5.65□□□□□ -1.51
KDM3B-209ENST00000542866 RASSF2P50749 326 aa5.65□□□□□ -1.51
KDM3B-209ENST00000542866 CCNG1P51959 295 aa5.65□□□□□ -1.51
KDM3B-209ENST00000542866 ZNF543Q08ER8 600 aa5.65□□□□□ -1.51
KDM3B-209ENST00000542866 RCN2Q14257 317 aa5.65□□□□□ -1.51
KDM3B-209ENST00000542866 USH1GQ495M9 461 aa5.65□□□□□ -1.51
KDM3B-209ENST00000542866 SPDYE2Q495Y8 402 aa5.65□□□□□ -1.51
KDM3B-209ENST00000542866 PRAMEF18Q5VWM3 479 aa5.65□□□□□ -1.51
KDM3B-209ENST00000542866 CWF19L1Q69YN2 538 aaKnown RBP5.65□□□□□ -1.51
KDM3B-209ENST00000542866 C11orf63Q6NUN7 778 aa5.65□□□□□ -1.51
KDM3B-209ENST00000542866 C4orf33Q8N1A6 199 aa5.65□□□□□ -1.51
KDM3B-209ENST00000542866 OLIG1Q8TAK6 271 aa5.65□□□□□ -1.51
KDM3B-209ENST00000542866 DTX3LQ8TDB6 740 aa5.65□□□□□ -1.51
KDM3B-209ENST00000542866 UCMAQ8WVF2 138 aa5.65□□□□□ -1.51
KDM3B-209ENST00000542866 SNF8Q96H20 258 aa5.65□□□□□ -1.51
KDM3B-209ENST00000542866 NAP1L4Q99733 375 aaKnown RBP5.65□□□□□ -1.51
KDM3B-209ENST00000542866 GPR88Q9GZN0 384 aa5.65□□□□□ -1.51
KDM3B-209ENST00000542866 LRMDAQ9H2I8 198 aa5.65□□□□□ -1.51
KDM3B-209ENST00000542866 DENND2DQ9H6A0 471 aaPredicted RBP5.65□□□□□ -1.51
KDM3B-209ENST00000542866 RRAGCQ9HB90 399 aa5.65□□□□□ -1.51
KDM3B-209ENST00000542866 ABT1Q9ULW3 272 aaKnown RBP5.65□□□□□ -1.51
KDM3B-209ENST00000542866 UBR3Q6ZT12 1888 aa5.64□□□□□ -1.51
KDM3B-209ENST00000542866 FAM47DPA6NHR8 397 aa5.64□□□□□ -1.51
KDM3B-209ENST00000542866 NVLO15381 856 aaKnown RBP5.64□□□□□ -1.51
KDM3B-209ENST00000542866 CDH16O75309 829 aa5.64□□□□□ -1.51
KDM3B-209ENST00000542866 LGR5O75473 907 aa5.64□□□□□ -1.51
KDM3B-209ENST00000542866 SGPL1O95470 568 aa5.64□□□□□ -1.51
KDM3B-209ENST00000542866 GAS8O95995 478 aa5.64□□□□□ -1.51
KDM3B-209ENST00000542866 GCLMP48507 274 aa5.64□□□□□ -1.51
KDM3B-209ENST00000542866 ERFP50548 548 aa5.64□□□□□ -1.51
KDM3B-209ENST00000542866 WDR4P57081 412 aaKnown RBP5.64□□□□□ -1.51
KDM3B-209ENST00000542866 ARHGAP4P98171 946 aa5.64□□□□□ -1.51
KDM3B-209ENST00000542866 TRAF1Q13077 416 aa5.64□□□□□ -1.51
KDM3B-209ENST00000542866 SEPT7Q16181 437 aaKnown RBP5.64□□□□□ -1.51
KDM3B-209ENST00000542866 PARP6Q2NL67 630 aa5.64□□□□□ -1.51
KDM3B-209ENST00000542866 TAF1BQ53T94 588 aaPredicted RBP5.64□□□□□ -1.51
KDM3B-209ENST00000542866 PPP1R15BQ5SWA1 713 aa5.64□□□□□ -1.51
KDM3B-209ENST00000542866 ZFYVE27Q5T4F4 411 aa5.64□□□□□ -1.51
KDM3B-209ENST00000542866 RFX8Q6ZV50 586 aa5.64□□□□□ -1.51
KDM3B-209ENST00000542866 TMEM179Q6ZVK1 233 aa5.64□□□□□ -1.51
KDM3B-209ENST00000542866 USP50Q70EL3 339 aaPredicted RBP5.64□□□□□ -1.51
KDM3B-209ENST00000542866 ZNF365Q70YC5 407 aa5.64□□□□□ -1.51
KDM3B-209ENST00000542866 GSTA5Q7RTV2 222 aa5.64□□□□□ -1.51
KDM3B-209ENST00000542866 TRMT1LQ7Z2T5 733 aaKnown RBP5.64□□□□□ -1.51
KDM3B-209ENST00000542866 ZC3H18Q86VM9 953 aaKnown RBP5.64□□□□□ -1.51
KDM3B-209ENST00000542866 ARHGEF19Q8IW93 802 aa5.64□□□□□ -1.51
KDM3B-209ENST00000542866 FAM178BQ8IXR5 827 aa5.64□□□□□ -1.51
KDM3B-209ENST00000542866 KAT5Q92993 513 aa5.64□□□□□ -1.51
KDM3B-209ENST00000542866 ZFP69BQ9UJL9 534 aa5.64□□□□□ -1.51
KDM3B-209ENST00000542866 DCTN4Q9UJW0 460 aa5.64□□□□□ -1.51
KDM3B-209ENST00000542866 DYNC1LI1Q9Y6G9 523 aaKnown RBP5.64□□□□□ -1.51
KDM3B-209ENST00000542866 EP400Q96L91 3159 aa5.64□□□□□ -1.51
KDM3B-209ENST00000542866 SNED1Q8TER0 1413 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms