RNA–Protein interactions for RNA: ENST00000542001.5

VARS2-212, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS2, Length 4,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-212ENST00000542001 DNAJC18Q9H819 358 aa17.07■□□□□ 0.32
VARS2-212ENST00000542001 KLC4Q9NSK0 619 aa17.07■□□□□ 0.32
VARS2-212ENST00000542001 NR2E1Q9Y466 385 aa17.07■□□□□ 0.32
VARS2-212ENST00000542001 BAZ2AQ9UIF9 1905 aaKnown RBP17.07■□□□□ 0.32
VARS2-212ENST00000542001 GOLGA4Q13439 2230 aaKnown RBP17.07■□□□□ 0.32
VARS2-212ENST00000542001 PFASO15067 1338 aa17.07■□□□□ 0.32
VARS2-212ENST00000542001 WNT10BO00744 389 aa17.07■□□□□ 0.32
VARS2-212ENST00000542001 CIB2O75838 187 aa17.07■□□□□ 0.32
VARS2-212ENST00000542001 GPC3P51654 580 aa17.07■□□□□ 0.32
VARS2-212ENST00000542001 MTMR12Q9C0I1 747 aa17.07■□□□□ 0.32
VARS2-212ENST00000542001 SLC38A10Q9HBR0 1119 aa17.07■□□□□ 0.32
VARS2-212ENST00000542001 RGPD1P0DJD0 1748 aa17.07■□□□□ 0.32
VARS2-212ENST00000542001 FOXO6A8MYZ6 492 aa17.06■□□□□ 0.32
VARS2-212ENST00000542001 SHBGP04278 402 aa17.06■□□□□ 0.32
VARS2-212ENST00000542001 ADORA2BP29275 332 aa17.06■□□□□ 0.32
VARS2-212ENST00000542001 GABPAQ06546 454 aa17.06■□□□□ 0.32
VARS2-212ENST00000542001 MYCBPQ99417 103 aaPredicted RBP17.06■□□□□ 0.32
VARS2-212ENST00000542001 OLFML3Q9NRN5 406 aa17.06■□□□□ 0.32
VARS2-212ENST00000542001 NUB1Q9Y5A7 615 aa17.06■□□□□ 0.32
VARS2-212ENST00000542001 PCDHB2Q9Y5E7 798 aa17.06■□□□□ 0.32
VARS2-212ENST00000542001 MYH10P35580 1976 aa17.06■□□□□ 0.32
VARS2-212ENST00000542001 LOC102724159A0A0B4J2E5 919 aa17.06■□□□□ 0.32
VARS2-212ENST00000542001 CSPG5O95196 566 aa17.06■□□□□ 0.32
VARS2-212ENST00000542001 FAM107AO95990 144 aa17.06■□□□□ 0.32
VARS2-212ENST00000542001 PDGFRBP09619 1106 aa17.06■□□□□ 0.32
VARS2-212ENST00000542001 HOXA7P31268 230 aaPredicted RBP17.06■□□□□ 0.32
VARS2-212ENST00000542001 CNTN2Q02246 1040 aa17.06■□□□□ 0.32
VARS2-212ENST00000542001 ZNF844Q08AG5 666 aa17.06■□□□□ 0.32
VARS2-212ENST00000542001 KIF22Q14807 665 aa17.06■□□□□ 0.32
VARS2-212ENST00000542001 PWP2Q15269 919 aaKnown RBP17.06■□□□□ 0.32
VARS2-212ENST00000542001 PDCD7Q8N8D1 485 aaKnown RBP17.06■□□□□ 0.32
VARS2-212ENST00000542001 ETNPPLQ8TBG4 499 aa17.06■□□□□ 0.32
VARS2-212ENST00000542001 TRAPPC12Q8WVT3 735 aa17.06■□□□□ 0.32
VARS2-212ENST00000542001 CALR3Q96L12 384 aaKnown RBP17.06■□□□□ 0.32
VARS2-212ENST00000542001 DIS3Q9Y2L1 958 aaKnown RBP17.06■□□□□ 0.32
VARS2-212ENST00000542001 STK10O94804 968 aaKnown RBP17.06■□□□□ 0.32
VARS2-212ENST00000542001 PRKCBP05771 671 aa17.06■□□□□ 0.32
VARS2-212ENST00000542001 PABPC3Q9H361 631 aaKnown RBP17.06■□□□□ 0.32
VARS2-212ENST00000542001 CHMP2BQ9UQN3 213 aa17.06■□□□□ 0.32
VARS2-212ENST00000542001 CFAP69A5D8W1 941 aa17.06■□□□□ 0.32
VARS2-212ENST00000542001 CST8O60676 142 aa17.06■□□□□ 0.32
VARS2-212ENST00000542001 LDHAP00338 332 aaKnown RBP17.06■□□□□ 0.32
VARS2-212ENST00000542001 SLC4A1P02730 911 aa17.06■□□□□ 0.32
VARS2-212ENST00000542001 RPL21P46778 160 aaKnown RBP17.06■□□□□ 0.32
VARS2-212ENST00000542001 ATP13A4Q4VNC1 1196 aa17.06■□□□□ 0.32
VARS2-212ENST00000542001 SH3BP5LQ7L8J4 393 aa17.06■□□□□ 0.32
VARS2-212ENST00000542001 SREK1Q8WXA9 508 aaKnown RBP17.06■□□□□ 0.32
VARS2-212ENST00000542001 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.06■□□□□ 0.32
VARS2-212ENST00000542001 AGAP1Q9UPQ3 857 aa17.06■□□□□ 0.32
VARS2-212ENST00000542001 NEU2Q9Y3R4 380 aa17.06■□□□□ 0.32
VARS2-212ENST00000542001 MRPL42Q9Y6G3 142 aaKnown RBP17.06■□□□□ 0.32
VARS2-212ENST00000542001 TXNP10599 105 aaKnown RBP17.05■□□□□ 0.32
VARS2-212ENST00000542001 CLCN3P51790 818 aa17.05■□□□□ 0.32
VARS2-212ENST00000542001 ITKQ08881 620 aa17.05■□□□□ 0.32
VARS2-212ENST00000542001 OVGP1Q12889 678 aa17.05■□□□□ 0.32
VARS2-212ENST00000542001 SPARCL1Q14515 664 aa17.05■□□□□ 0.32
VARS2-212ENST00000542001 SLC15A2Q16348 729 aa17.05■□□□□ 0.32
VARS2-212ENST00000542001 ALG3Q92685 438 aa17.05■□□□□ 0.32
VARS2-212ENST00000542001 SCYL1Q96KG9 808 aa17.05■□□□□ 0.32
VARS2-212ENST00000542001 SAE1Q9UBE0 346 aaPredicted RBP17.05■□□□□ 0.32
VARS2-212ENST00000542001 KCPQ6ZWJ8 1503 aa17.05■□□□□ 0.32
VARS2-212ENST00000542001 RARAP10276 462 aa17.05■□□□□ 0.32
VARS2-212ENST00000542001 RBM41Q96IZ5 413 aaKnown RBP17.05■□□□□ 0.32
VARS2-212ENST00000542001 TTYH3Q9C0H2 523 aa17.05■□□□□ 0.32
VARS2-212ENST00000542001 ECT2Q9H8V3 914 aa17.05■□□□□ 0.32
VARS2-212ENST00000542001 TMBIM4Q9HC24 238 aa17.05■□□□□ 0.32
VARS2-212ENST00000542001 CTNNAL1Q9UBT7 734 aa17.05■□□□□ 0.32
VARS2-212ENST00000542001 GCLCP48506 637 aaPredicted RBP17.05■□□□□ 0.32
VARS2-212ENST00000542001 RASSF2P50749 326 aa17.05■□□□□ 0.32
VARS2-212ENST00000542001 CPNE8Q86YQ8 564 aa17.05■□□□□ 0.32
VARS2-212ENST00000542001 MRPL4Q9BYD3 311 aaKnown RBP17.05■□□□□ 0.32
VARS2-212ENST00000542001 DHX35Q9H5Z1 703 aaKnown RBP17.05■□□□□ 0.32
VARS2-212ENST00000542001 UVRAGQ9P2Y5 699 aa17.05■□□□□ 0.32
VARS2-212ENST00000542001 PCDHGC5Q9Y5F6 944 aa17.05■□□□□ 0.32
VARS2-212ENST00000542001 RASSF10A6NK89 507 aa17.04■□□□□ 0.32
VARS2-212ENST00000542001 PJA2O43164 708 aa17.04■□□□□ 0.32
VARS2-212ENST00000542001 CREB3O43889 395 aa17.04■□□□□ 0.32
VARS2-212ENST00000542001 APRTP07741 180 aa17.04■□□□□ 0.32
VARS2-212ENST00000542001 HNRNPH1P31943 449 aaKnown RBP17.04■□□□□ 0.32
VARS2-212ENST00000542001 RAP1GAPP47736 663 aa17.04■□□□□ 0.32
VARS2-212ENST00000542001 TMPRSS15P98073 1019 aa17.04■□□□□ 0.32
VARS2-212ENST00000542001 GLRA4Q5JXX5 417 aa17.04■□□□□ 0.32
VARS2-212ENST00000542001 ACTRT1Q8TDG2 376 aa17.04■□□□□ 0.32
VARS2-212ENST00000542001 CDC42EP4Q9H3Q1 356 aaKnown RBP17.04■□□□□ 0.32
VARS2-212ENST00000542001 CHST7Q9NS84 486 aa17.04■□□□□ 0.32
VARS2-212ENST00000542001 GTF3C4Q9UKN8 822 aa17.04■□□□□ 0.32
VARS2-212ENST00000542001 CDR2Q01850 454 aa17.04■□□□□ 0.32
VARS2-212ENST00000542001 PCGF5Q86SE9 256 aa17.04■□□□□ 0.32
VARS2-212ENST00000542001 TRABDQ9H4I3 376 aa17.04■□□□□ 0.32
VARS2-212ENST00000542001 CYP26B1Q9NR63 512 aa17.04■□□□□ 0.32
VARS2-212ENST00000542001 PARVAQ9NVD7 372 aa17.04■□□□□ 0.32
VARS2-212ENST00000542001 PPARGC1AQ9UBK2 798 aaKnown RBP17.04■□□□□ 0.32
VARS2-212ENST00000542001 AJAP1Q9UKB5 411 aaPredicted RBP17.04■□□□□ 0.32
VARS2-212ENST00000542001 SNX9Q9Y5X1 595 aa17.04■□□□□ 0.32
VARS2-212ENST00000542001 ADRB2P07550 413 aa17.04■□□□□ 0.32
VARS2-212ENST00000542001 ZSCAN5DPP0CG00 497 aa17.04■□□□□ 0.32
VARS2-212ENST00000542001 PACS2Q86VP3 889 aa17.04■□□□□ 0.32
VARS2-212ENST00000542001 MCUQ8NE86 351 aa17.04■□□□□ 0.32
VARS2-212ENST00000542001 LPAR1Q92633 364 aa17.04■□□□□ 0.32
VARS2-212ENST00000542001 AGAP3Q96P47 875 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms