RNA–Protein interactions for RNA: ENST00000541817.5

CHFR-220, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-220ENST00000541817 BCKDHBP21953 392 aa10.84□□□□□ -0.67
CHFR-220ENST00000541817 NPEPPSP55786 919 aa10.84□□□□□ -0.67
CHFR-220ENST00000541817 PTH1RQ03431 593 aa10.84□□□□□ -0.67
CHFR-220ENST00000541817 TTC22Q5TAA0 569 aa10.84□□□□□ -0.67
CHFR-220ENST00000541817 CYP2U1Q7Z449 544 aa10.84□□□□□ -0.67
CHFR-220ENST00000541817 SRGAP1Q7Z6B7 1085 aa10.84□□□□□ -0.67
CHFR-220ENST00000541817 RAB44Q7Z6P3 723 aaPredicted RBP10.84□□□□□ -0.67
CHFR-220ENST00000541817 CRYGNQ8WXF5 182 aa10.84□□□□□ -0.67
CHFR-220ENST00000541817 AVENQ9NQS1 362 aaPredicted RBP10.84□□□□□ -0.67
CHFR-220ENST00000541817 MBD1Q9UIS9 605 aaPredicted RBP10.84□□□□□ -0.67
CHFR-220ENST00000541817 GIT1Q9Y2X7 761 aa10.84□□□□□ -0.67
CHFR-220ENST00000541817 CACNA1EQ15878 2313 aa10.83□□□□□ -0.68
CHFR-220ENST00000541817 CCDC163A0A0D9SF12 145 aa10.83□□□□□ -0.68
CHFR-220ENST00000541817 CCDC194A0A1B0GVG4 234 aa10.83□□□□□ -0.68
CHFR-220ENST00000541817 CCDC69A6NI79 296 aa10.83□□□□□ -0.68
CHFR-220ENST00000541817 ZNF197O14709 1029 aa10.83□□□□□ -0.68
CHFR-220ENST00000541817 CYP3A4P08684 503 aa10.83□□□□□ -0.68
CHFR-220ENST00000541817 TKTP29401 623 aaKnown RBP10.83□□□□□ -0.68
CHFR-220ENST00000541817 ELF1P32519 619 aa10.83□□□□□ -0.68
CHFR-220ENST00000541817 DHPSP49366 369 aaPredicted RBP10.83□□□□□ -0.68
CHFR-220ENST00000541817 LAMTOR4Q0VGL1 99 aa10.83□□□□□ -0.68
CHFR-220ENST00000541817 GRIK3Q13003 919 aa10.83□□□□□ -0.68
CHFR-220ENST00000541817 AP3B2Q13367 1082 aa10.83□□□□□ -0.68
CHFR-220ENST00000541817 XKR3Q5GH77 459 aa10.83□□□□□ -0.68
CHFR-220ENST00000541817 STXBP5Q5T5C0 1151 aa10.83□□□□□ -0.68
CHFR-220ENST00000541817 CYP4A22Q5TCH4 519 aa10.83□□□□□ -0.68
CHFR-220ENST00000541817 FSTL4Q6MZW2 842 aa10.83□□□□□ -0.68
CHFR-220ENST00000541817 TMTC3Q6ZXV5 915 aa10.83□□□□□ -0.68
CHFR-220ENST00000541817 PIP4P1Q86T03 277 aa10.83□□□□□ -0.68
CHFR-220ENST00000541817 RALGPS2Q86X27 583 aaPredicted RBP10.83□□□□□ -0.68
CHFR-220ENST00000541817 MARCH9Q86YJ5 346 aa10.83□□□□□ -0.68
CHFR-220ENST00000541817 MB21D2Q8IYB1 491 aaPredicted RBP10.83□□□□□ -0.68
CHFR-220ENST00000541817 RNF149Q8NC42 400 aa10.83□□□□□ -0.68
CHFR-220ENST00000541817 CAMK1GQ96NX5 476 aa10.83□□□□□ -0.68
CHFR-220ENST00000541817 TPSD1Q9BZJ3 242 aa10.83□□□□□ -0.68
CHFR-220ENST00000541817 TRIM6Q9C030 488 aaPredicted RBP10.83□□□□□ -0.68
CHFR-220ENST00000541817 CSRNP2Q9H175 543 aa10.83□□□□□ -0.68
CHFR-220ENST00000541817 CYP4F11Q9HBI6 524 aa10.83□□□□□ -0.68
CHFR-220ENST00000541817 MTRRQ9UBK8 725 aa10.83□□□□□ -0.68
CHFR-220ENST00000541817 ARHGEF37A1IGU5 675 aa10.82□□□□□ -0.68
CHFR-220ENST00000541817 MSH4O15457 936 aa10.82□□□□□ -0.68
CHFR-220ENST00000541817 GAS7O60861 476 aa10.82□□□□□ -0.68
CHFR-220ENST00000541817 EGFP01133 1207 aa10.82□□□□□ -0.68
CHFR-220ENST00000541817 PRKCBP05771 671 aa10.82□□□□□ -0.68
CHFR-220ENST00000541817 U2AF2P26368 475 aaKnown RBP eCLIP10.82□□□□□ -0.684e-6■□□□□ 8.6
CHFR-220ENST00000541817 DGKEP52429 567 aa10.82□□□□□ -0.68
CHFR-220ENST00000541817 ROR1Q01973 937 aa10.82□□□□□ -0.68
CHFR-220ENST00000541817 TUSC3Q13454 348 aa10.82□□□□□ -0.68
CHFR-220ENST00000541817 TRIM61Q5EBN2 209 aa10.82□□□□□ -0.68
CHFR-220ENST00000541817 PMS2CLQ68D20 193 aa10.82□□□□□ -0.68
CHFR-220ENST00000541817 NOTUMQ6P988 496 aa10.82□□□□□ -0.68
CHFR-220ENST00000541817 ANO5Q75V66 913 aa10.82□□□□□ -0.68
CHFR-220ENST00000541817 ARMCX6Q7L4S7 300 aa10.82□□□□□ -0.68
CHFR-220ENST00000541817 MIER3Q7Z3K6 550 aa10.82□□□□□ -0.68
CHFR-220ENST00000541817 TICAM2Q86XR7 235 aa10.82□□□□□ -0.68
CHFR-220ENST00000541817 ZNF843Q8N446 348 aa10.82□□□□□ -0.68
CHFR-220ENST00000541817 SPRYD3Q8NCJ5 442 aa10.82□□□□□ -0.68
CHFR-220ENST00000541817 OR2I1PQ8NGU4 316 aa10.82□□□□□ -0.68
CHFR-220ENST00000541817 LENG9Q96B70 501 aa10.82□□□□□ -0.68
CHFR-220ENST00000541817 MSANTD3Q96H12 275 aa10.82□□□□□ -0.68
CHFR-220ENST00000541817 UBL7Q96S82 380 aaPredicted RBP10.82□□□□□ -0.68
CHFR-220ENST00000541817 LRRC2Q9BYS8 371 aa10.82□□□□□ -0.68
CHFR-220ENST00000541817 TRPV4Q9HBA0 871 aa10.82□□□□□ -0.68
CHFR-220ENST00000541817 CEP72Q9P209 647 aa10.82□□□□□ -0.68
CHFR-220ENST00000541817 CNTNAP5Q8WYK1 1306 aa10.82□□□□□ -0.68
CHFR-220ENST00000541817 ATXN2Q99700 1313 aaKnown RBP10.82□□□□□ -0.68
CHFR-220ENST00000541817 PTGESO14684 152 aa10.81□□□□□ -0.68
CHFR-220ENST00000541817 ARHGAP6O43182 974 aa10.81□□□□□ -0.68
CHFR-220ENST00000541817 B4GALT5O43286 388 aa10.81□□□□□ -0.68
CHFR-220ENST00000541817 PRC1O43663 620 aa10.81□□□□□ -0.68
CHFR-220ENST00000541817 RNF40O75150 1001 aa10.81□□□□□ -0.68
CHFR-220ENST00000541817 ENGP17813 658 aa10.81□□□□□ -0.68
CHFR-220ENST00000541817 ARF4P18085 180 aaPredicted RBP10.81□□□□□ -0.68
CHFR-220ENST00000541817 FGFR3P22607 806 aa10.81□□□□□ -0.68
CHFR-220ENST00000541817 RDXP35241 583 aaKnown RBP10.81□□□□□ -0.68
CHFR-220ENST00000541817 MLLT6P55198 1093 aaPredicted RBP10.81□□□□□ -0.68
CHFR-220ENST00000541817 SETQ01105 290 aaPredicted RBP10.81□□□□□ -0.68
CHFR-220ENST00000541817 SPIRE1Q08AE8 756 aa10.81□□□□□ -0.68
CHFR-220ENST00000541817 SEMA3BQ13214 749 aa10.81□□□□□ -0.68
CHFR-220ENST00000541817 NAIF1Q69YI7 327 aaPredicted RBP10.81□□□□□ -0.68
CHFR-220ENST00000541817 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.81□□□□□ -0.68
CHFR-220ENST00000541817 ARID3BQ8IVW6 561 aaPredicted RBP10.81□□□□□ -0.68
CHFR-220ENST00000541817 SYNPOQ8N3V7 929 aa10.81□□□□□ -0.68
CHFR-220ENST00000541817 SHKBP1Q8TBC3 707 aa10.81□□□□□ -0.68
CHFR-220ENST00000541817 DDX27Q96GQ7 796 aaKnown RBP10.81□□□□□ -0.68
CHFR-220ENST00000541817 TMEM209Q96SK2 561 aa10.81□□□□□ -0.68
CHFR-220ENST00000541817 GTPBP2Q9BX10 602 aaKnown RBP10.81□□□□□ -0.68
CHFR-220ENST00000541817 FBRSL1Q9HCM7 1045 aaKnown RBP10.81□□□□□ -0.68
CHFR-220ENST00000541817 SCUBE2Q9NQ36 999 aa10.81□□□□□ -0.68
CHFR-220ENST00000541817 TMEM74BQ9NUR3 256 aa10.81□□□□□ -0.68
CHFR-220ENST00000541817 CIZ1Q9ULV3 898 aaPredicted RBP10.81□□□□□ -0.68
CHFR-220ENST00000541817 INSL5Q9Y5Q6 135 aa10.81□□□□□ -0.68
CHFR-220ENST00000541817 U3KPZ7 1027 aaPredicted RBP10.81□□□□□ -0.68
CHFR-220ENST00000541817 V9GY48 417 aaPredicted RBP10.81□□□□□ -0.68
CHFR-220ENST00000541817 KALRNO60229 2985 aa10.8□□□□□ -0.68
CHFR-220ENST00000541817 A0A1W2PRU2 124 aa10.8□□□□□ -0.68
CHFR-220ENST00000541817 H0Y626 953 aa10.8□□□□□ -0.68
CHFR-220ENST00000541817 INO80B-WBP1J3KQ70 363 aa10.8□□□□□ -0.68
CHFR-220ENST00000541817 J3QKU1 62 aa10.8□□□□□ -0.68
CHFR-220ENST00000541817 SH2B2O14492 632 aaPredicted RBP10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms