RNA–Protein interactions for RNA: ENST00000540699.1

ATL3-204, Transcript of atlastin GTPase 3, humanhuman

TSL 3

Gene ATL3, Length 714 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-204ENST00000540699 CCDC40Q4G0X9 1142 aa11.49□□□□□ -0.57
ATL3-204ENST00000540699 VWA3BQ502W6 1294 aa11.49□□□□□ -0.57
ATL3-204ENST00000540699 PAN2Q504Q3 1202 aaKnown RBP11.49□□□□□ -0.57
ATL3-204ENST00000540699 ARMCX5Q6P1M9 558 aa11.49□□□□□ -0.57
ATL3-204ENST00000540699 SPRED2Q7Z698 418 aa11.49□□□□□ -0.57
ATL3-204ENST00000540699 ZBTB33Q86T24 672 aa11.49□□□□□ -0.57
ATL3-204ENST00000540699 TMEM192Q8IY95 271 aa11.49□□□□□ -0.57
ATL3-204ENST00000540699 CACTINQ8WUQ7 758 aaKnown RBP11.49□□□□□ -0.57
ATL3-204ENST00000540699 ZFP42Q96MM3 310 aa11.49□□□□□ -0.57
ATL3-204ENST00000540699 ERGIC2Q96RQ1 377 aa11.49□□□□□ -0.57
ATL3-204ENST00000540699 TGS1Q96RS0 853 aaKnown RBP11.49□□□□□ -0.57
ATL3-204ENST00000540699 GAD1Q99259 594 aa11.49□□□□□ -0.57
ATL3-204ENST00000540699 CCDC94Q9BW85 323 aaPredicted RBP11.49□□□□□ -0.57
ATL3-204ENST00000540699 C1QTNF1Q9BXJ1 281 aa11.49□□□□□ -0.57
ATL3-204ENST00000540699 CERS4Q9HA82 394 aa11.49□□□□□ -0.57
ATL3-204ENST00000540699 TBC1D13Q9NVG8 400 aa11.49□□□□□ -0.57
ATL3-204ENST00000540699 MIOSQ9NXC5 875 aa11.49□□□□□ -0.57
ATL3-204ENST00000540699 KANSL3Q9P2N6 904 aa11.49□□□□□ -0.57
ATL3-204ENST00000540699 RWDD3Q9Y3V2 267 aa11.49□□□□□ -0.57
ATL3-204ENST00000540699 MTCH2Q9Y6C9 303 aa11.49□□□□□ -0.57
ATL3-204ENST00000540699 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.49□□□□□ -0.57
ATL3-204ENST00000540699 CARNS1A5YM72 827 aa11.48□□□□□ -0.57
ATL3-204ENST00000540699 PTGESO14684 152 aa11.48□□□□□ -0.57
ATL3-204ENST00000540699 KIAA0391O15091 583 aaKnown RBP11.48□□□□□ -0.57
ATL3-204ENST00000540699 RB1P06400 928 aa11.48□□□□□ -0.57
ATL3-204ENST00000540699 CLTAP09496 248 aa11.48□□□□□ -0.57
ATL3-204ENST00000540699 EPB41P11171 864 aaKnown RBP11.48□□□□□ -0.57
ATL3-204ENST00000540699 BMP1P13497 986 aa11.48□□□□□ -0.57
ATL3-204ENST00000540699 IBSPP21815 317 aaPredicted RBP11.48□□□□□ -0.57
ATL3-204ENST00000540699 BMPR1AP36894 532 aa11.48□□□□□ -0.57
ATL3-204ENST00000540699 MLH1P40692 756 aa11.48□□□□□ -0.57
ATL3-204ENST00000540699 UBXN1Q04323 297 aa11.48□□□□□ -0.57
ATL3-204ENST00000540699 DSC1Q08554 894 aa11.48□□□□□ -0.57
ATL3-204ENST00000540699 ARID5BQ14865 1188 aa11.48□□□□□ -0.57
ATL3-204ENST00000540699 NAB2Q15742 525 aa11.48□□□□□ -0.57
ATL3-204ENST00000540699 CEP135Q66GS9 1140 aa11.48□□□□□ -0.57
ATL3-204ENST00000540699 CREBRFQ8IUR6 639 aa11.48□□□□□ -0.57
ATL3-204ENST00000540699 SYCP3Q8IZU3 236 aa11.48□□□□□ -0.57
ATL3-204ENST00000540699 CCDC150Q8NCX0 1101 aa11.48□□□□□ -0.57
ATL3-204ENST00000540699 URGCPQ8TCY9 931 aa11.48□□□□□ -0.57
ATL3-204ENST00000540699 SNX27Q96L92 541 aa11.48□□□□□ -0.57
ATL3-204ENST00000540699 ZNF830Q96NB3 372 aaPredicted RBP11.48□□□□□ -0.57
ATL3-204ENST00000540699 ACAP3Q96P50 834 aa11.48□□□□□ -0.57
ATL3-204ENST00000540699 CBWD1Q9BRT8 395 aa11.48□□□□□ -0.57
ATL3-204ENST00000540699 C17orf80Q9BSJ5 609 aa11.48□□□□□ -0.57
ATL3-204ENST00000540699 MSTO1Q9BUK6 570 aa11.48□□□□□ -0.57
ATL3-204ENST00000540699 APOL6Q9BWW8 343 aa11.48□□□□□ -0.57
ATL3-204ENST00000540699 PLVAPQ9BX97 442 aa11.48□□□□□ -0.57
ATL3-204ENST00000540699 NDST4Q9H3R1 872 aa11.48□□□□□ -0.57
ATL3-204ENST00000540699 METTL14Q9HCE5 456 aaKnown RBP11.48□□□□□ -0.57
ATL3-204ENST00000540699 CNTN3Q9P232 1028 aa11.48□□□□□ -0.57
ATL3-204ENST00000540699 HCSTQ9UBK5 93 aa11.48□□□□□ -0.57
ATL3-204ENST00000540699 PARP2Q9UGN5 583 aa11.48□□□□□ -0.57
ATL3-204ENST00000540699 CPSF3Q9UKF6 684 aaKnown RBP11.48□□□□□ -0.57
ATL3-204ENST00000540699 AGO2Q9UKV8 859 aaKnown RBP11.48□□□□□ -0.57
ATL3-204ENST00000540699 ZKSCAN5Q9Y2L8 839 aa11.48□□□□□ -0.57
ATL3-204ENST00000540699 ARIH1Q9Y4X5 557 aaPredicted RBP11.48□□□□□ -0.57
ATL3-204ENST00000540699 TTC26A0AVF1 554 aa11.47□□□□□ -0.57
ATL3-204ENST00000540699 MAPK13O15264 365 aa11.47□□□□□ -0.57
ATL3-204ENST00000540699 B4GALT3O60512 393 aa11.47□□□□□ -0.57
ATL3-204ENST00000540699 TPM2P07951 284 aa11.47□□□□□ -0.57
ATL3-204ENST00000540699 KCNE1P15382 129 aa11.47□□□□□ -0.57
ATL3-204ENST00000540699 LAG3P18627 525 aa11.47□□□□□ -0.57
ATL3-204ENST00000540699 PSMC2P35998 433 aaKnown RBP11.47□□□□□ -0.57
ATL3-204ENST00000540699 SCNN1GP51170 649 aa11.47□□□□□ -0.57
ATL3-204ENST00000540699 CCZ1BP86790 482 aa11.47□□□□□ -0.57
ATL3-204ENST00000540699 CCZ1P86791 482 aaPredicted RBP11.47□□□□□ -0.57
ATL3-204ENST00000540699 TFF2Q03403 129 aa11.47□□□□□ -0.57
ATL3-204ENST00000540699 PPP2R3AQ06190 1150 aa11.47□□□□□ -0.57
ATL3-204ENST00000540699 GRIK3Q13003 919 aa11.47□□□□□ -0.57
ATL3-204ENST00000540699 ENOX2Q16206 610 aaKnown RBP11.47□□□□□ -0.57
ATL3-204ENST00000540699 AAK1Q2M2I8 961 aa11.47□□□□□ -0.57
ATL3-204ENST00000540699 SLC10A6Q3KNW5 377 aa11.47□□□□□ -0.57
ATL3-204ENST00000540699 EPC2Q52LR7 807 aa11.47□□□□□ -0.57
ATL3-204ENST00000540699 ZBTB41Q5SVQ8 909 aa11.47□□□□□ -0.57
ATL3-204ENST00000540699 CRELD2Q6UXH1 353 aaPredicted RBP11.47□□□□□ -0.57
ATL3-204ENST00000540699 LRRC8AQ8IWT6 810 aa11.47□□□□□ -0.57
ATL3-204ENST00000540699 FAM186BQ8IYM0 893 aa11.47□□□□□ -0.57
ATL3-204ENST00000540699 THNSL1Q8IYQ7 743 aa11.47□□□□□ -0.57
ATL3-204ENST00000540699 COLGALT1Q8NBJ5 622 aa11.47□□□□□ -0.57
ATL3-204ENST00000540699 ARNTL2Q8WYA1 636 aa11.47□□□□□ -0.57
ATL3-204ENST00000540699 POMGNT1Q8WZA1 660 aa11.47□□□□□ -0.57
ATL3-204ENST00000540699 FBXL18Q96ME1 805 aa11.47□□□□□ -0.57
ATL3-204ENST00000540699 PPP1R10Q96QC0 940 aaKnown RBP11.47□□□□□ -0.57
ATL3-204ENST00000540699 TMEM175Q9BSA9 504 aa11.47□□□□□ -0.57
ATL3-204ENST00000540699 TTYH3Q9C0H2 523 aa11.47□□□□□ -0.57
ATL3-204ENST00000540699 CXCL16Q9H2A7 254 aa11.47□□□□□ -0.57
ATL3-204ENST00000540699 NRDE2Q9H7Z3 1164 aa11.47□□□□□ -0.57
ATL3-204ENST00000540699 PLEKHA5Q9HAU0 1116 aa11.47□□□□□ -0.57
ATL3-204ENST00000540699 TOPORSQ9NS56 1045 aaPredicted RBP11.47□□□□□ -0.57
ATL3-204ENST00000540699 HSPBP1Q9NZL4 362 aa11.47□□□□□ -0.57
ATL3-204ENST00000540699 KLK14Q9P0G3 267 aa11.47□□□□□ -0.57
ATL3-204ENST00000540699 ARMCX3Q9UH62 379 aaPredicted RBP11.47□□□□□ -0.57
ATL3-204ENST00000540699 PLAGL2Q9UPG8 496 aa11.47□□□□□ -0.57
ATL3-204ENST00000540699 INPP5FQ9Y2H2 1132 aa11.47□□□□□ -0.57
ATL3-204ENST00000540699 SIK3Q9Y2K2 1263 aa11.47□□□□□ -0.57
ATL3-204ENST00000540699 DDHD2O94830 711 aa11.46□□□□□ -0.57
ATL3-204ENST00000540699 POMCP01189 267 aa11.46□□□□□ -0.57
ATL3-204ENST00000540699 GYPCP04921 128 aa11.46□□□□□ -0.57
ATL3-204ENST00000540699 HARSP12081 509 aaKnown RBP11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms