RNA–Protein interactions for RNA: ENST00000540301.1

KLHL42-203, Transcript of kelch like family member 42, humanhuman

TSL 3

Gene KLHL42, Length 793 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL42-203ENST00000540301 CSRNP2Q9H175 543 aa9.09□□□□□ -0.95
KLHL42-203ENST00000540301 GLT8D2Q9H1C3 349 aa9.09□□□□□ -0.95
KLHL42-203ENST00000540301 NXF3Q9H4D5 531 aaKnown RBP9.09□□□□□ -0.95
KLHL42-203ENST00000540301 POLR3BQ9NW08 1133 aaPredicted RBP9.09□□□□□ -0.95
KLHL42-203ENST00000540301 SNTG2Q9NY99 539 aa9.09□□□□□ -0.95
KLHL42-203ENST00000540301 PARP2Q9UGN5 583 aa9.09□□□□□ -0.95
KLHL42-203ENST00000540301 APC2O95996 2303 aa9.09□□□□□ -0.95
KLHL42-203ENST00000540301 THADAQ6YHU6 1953 aa9.08□□□□□ -0.96
KLHL42-203ENST00000540301 UNC79Q9P2D8 2635 aa9.08□□□□□ -0.96
KLHL42-203ENST00000540301 HIP1O00291 1037 aa9.08□□□□□ -0.96
KLHL42-203ENST00000540301 ARHGAP6O43182 974 aa9.08□□□□□ -0.96
KLHL42-203ENST00000540301 TSPAN1O60635 241 aa9.08□□□□□ -0.96
KLHL42-203ENST00000540301 MYL4P12829 197 aa9.08□□□□□ -0.96
KLHL42-203ENST00000540301 FGFR3P22607 806 aa9.08□□□□□ -0.96
KLHL42-203ENST00000540301 GRSF1Q12849 480 aaKnown RBP eCLIP9.08□□□□□ -0.96
KLHL42-203ENST00000540301 PCBP1Q15365 356 aaKnown RBP eCLIP9.08□□□□□ -0.96
KLHL42-203ENST00000540301 TEAD2Q15562 447 aa9.08□□□□□ -0.96
KLHL42-203ENST00000540301 ARHGAP29Q52LW3 1261 aa9.08□□□□□ -0.96
KLHL42-203ENST00000540301 TMTC3Q6ZXV5 915 aa9.08□□□□□ -0.96
KLHL42-203ENST00000540301 HAUS6Q7Z4H7 955 aa9.08□□□□□ -0.96
KLHL42-203ENST00000540301 C11orf74Q86VG3 221 aa9.08□□□□□ -0.96
KLHL42-203ENST00000540301 HS6ST3Q8IZP7 471 aa9.08□□□□□ -0.96
KLHL42-203ENST00000540301 ELMOD1Q8N336 334 aa9.08□□□□□ -0.96
KLHL42-203ENST00000540301 HDDC3Q8N4P3 179 aa9.08□□□□□ -0.96
KLHL42-203ENST00000540301 PSPC1Q8WXF1 523 aaKnown RBP9.08□□□□□ -0.96
KLHL42-203ENST00000540301 PIGKQ92643 395 aa9.08□□□□□ -0.96
KLHL42-203ENST00000540301 ZFYVE19Q96K21 471 aa9.08□□□□□ -0.96
KLHL42-203ENST00000540301 ZNF512Q96ME7 567 aaPredicted RBP9.08□□□□□ -0.96
KLHL42-203ENST00000540301 NUSAP1Q9BXS6 441 aaKnown RBP9.08□□□□□ -0.96
KLHL42-203ENST00000540301 GPR88Q9GZN0 384 aa9.08□□□□□ -0.96
KLHL42-203ENST00000540301 SLITRK6Q9H5Y7 841 aa9.08□□□□□ -0.96
KLHL42-203ENST00000540301 CYP4F11Q9HBI6 524 aa9.08□□□□□ -0.96
KLHL42-203ENST00000540301 EBF1Q9UH73 591 aa9.08□□□□□ -0.96
KLHL42-203ENST00000540301 EVLQ9UI08 416 aaPredicted RBP9.08□□□□□ -0.96
KLHL42-203ENST00000540301 INVSQ9Y283 1065 aa9.08□□□□□ -0.96
KLHL42-203ENST00000540301 BACE2Q9Y5Z0 518 aa9.08□□□□□ -0.96
KLHL42-203ENST00000540301 CELSR3Q9NYQ7 3312 aa9.08□□□□□ -0.96
KLHL42-203ENST00000540301 PLXNB3Q9ULL4 1909 aa9.07□□□□□ -0.96
KLHL42-203ENST00000540301 CCDC69A6NI79 296 aa9.07□□□□□ -0.96
KLHL42-203ENST00000540301 E7EWF7 191 aa9.07□□□□□ -0.96
KLHL42-203ENST00000540301 ATXN7O15265 892 aaPredicted RBP9.07□□□□□ -0.96
KLHL42-203ENST00000540301 GAS7O60861 476 aa9.07□□□□□ -0.96
KLHL42-203ENST00000540301 ABLIM3O94929 683 aa9.07□□□□□ -0.96
KLHL42-203ENST00000540301 APBB3O95704 486 aa9.07□□□□□ -0.96
KLHL42-203ENST00000540301 ENGP17813 658 aa9.07□□□□□ -0.96
KLHL42-203ENST00000540301 DHPSP49366 369 aaPredicted RBP9.07□□□□□ -0.96
KLHL42-203ENST00000540301 ROR1Q01973 937 aa9.07□□□□□ -0.96
KLHL42-203ENST00000540301 LAMTOR4Q0VGL1 99 aa9.07□□□□□ -0.96
KLHL42-203ENST00000540301 HNRNPDQ14103 355 aaKnown RBP9.07□□□□□ -0.96
KLHL42-203ENST00000540301 USP39Q53GS9 565 aaKnown RBP9.07□□□□□ -0.96
KLHL42-203ENST00000540301 TMEM196Q5HYL7 178 aa9.07□□□□□ -0.96
KLHL42-203ENST00000540301 PLA2G4FQ68DD2 849 aa9.07□□□□□ -0.96
KLHL42-203ENST00000540301 FSTL4Q6MZW2 842 aa9.07□□□□□ -0.96
KLHL42-203ENST00000540301 ANKS3Q6ZW76 656 aa9.07□□□□□ -0.96
KLHL42-203ENST00000540301 RAB11FIP4Q86YS3 637 aa9.07□□□□□ -0.96
KLHL42-203ENST00000540301 GPIHBP1Q8IV16 184 aa9.07□□□□□ -0.96
KLHL42-203ENST00000540301 TMTC2Q8N394 836 aa9.07□□□□□ -0.96
KLHL42-203ENST00000540301 ZNF843Q8N446 348 aa9.07□□□□□ -0.96
KLHL42-203ENST00000540301 RNF149Q8NC42 400 aa9.07□□□□□ -0.96
KLHL42-203ENST00000540301 LEMD2Q8NC56 503 aa9.07□□□□□ -0.96
KLHL42-203ENST00000540301 ADAMTS14Q8WXS8 1223 aa9.07□□□□□ -0.96
KLHL42-203ENST00000540301 SLC7A3Q8WY07 619 aa9.07□□□□□ -0.96
KLHL42-203ENST00000540301 TMEM143Q96AN5 459 aa9.07□□□□□ -0.96
KLHL42-203ENST00000540301 LENG9Q96B70 501 aa9.07□□□□□ -0.96
KLHL42-203ENST00000540301 RIT2Q99578 217 aa9.07□□□□□ -0.96
KLHL42-203ENST00000540301 TEKT3Q9BXF9 490 aa9.07□□□□□ -0.96
KLHL42-203ENST00000540301 UNC45AQ9H3U1 944 aa9.07□□□□□ -0.96
KLHL42-203ENST00000540301 INSL5Q9Y5Q6 135 aa9.07□□□□□ -0.96
KLHL42-203ENST00000540301 TAF6LQ9Y6J9 622 aa9.07□□□□□ -0.96
KLHL42-203ENST00000540301 ZMYM2Q9UBW7 1377 aa9.07□□□□□ -0.96
KLHL42-203ENST00000540301 DPYSL4O14531 572 aa9.06□□□□□ -0.96
KLHL42-203ENST00000540301 MSH4O15457 936 aa9.06□□□□□ -0.96
KLHL42-203ENST00000540301 RNF40O75150 1001 aa9.06□□□□□ -0.96
KLHL42-203ENST00000540301 ATF2P15336 505 aa9.06□□□□□ -0.96
KLHL42-203ENST00000540301 CIITAP33076 1130 aa9.06□□□□□ -0.96
KLHL42-203ENST00000540301 DGKEP52429 567 aa9.06□□□□□ -0.96
KLHL42-203ENST00000540301 ATXN3P54252 364 aaPredicted RBP9.06□□□□□ -0.96
KLHL42-203ENST00000540301 TNK2Q07912 1038 aa9.06□□□□□ -0.96
KLHL42-203ENST00000540301 PTPAQ15257 358 aa9.06□□□□□ -0.96
KLHL42-203ENST00000540301 LRCH2Q5VUJ6 765 aa9.06□□□□□ -0.96
KLHL42-203ENST00000540301 SLC8B1Q6J4K2 584 aa9.06□□□□□ -0.96
KLHL42-203ENST00000540301 CASC1Q6TDU7 716 aa9.06□□□□□ -0.96
KLHL42-203ENST00000540301 ANO5Q75V66 913 aa9.06□□□□□ -0.96
KLHL42-203ENST00000540301 MIER3Q7Z3K6 550 aa9.06□□□□□ -0.96
KLHL42-203ENST00000540301 MB21D2Q8IYB1 491 aaPredicted RBP9.06□□□□□ -0.96
KLHL42-203ENST00000540301 TCEAL8Q8IYN2 117 aa9.06□□□□□ -0.96
KLHL42-203ENST00000540301 FANCBQ8NB91 859 aa9.06□□□□□ -0.96
KLHL42-203ENST00000540301 RDM1Q8NG50 284 aa9.06□□□□□ -0.96
KLHL42-203ENST00000540301 DDX27Q96GQ7 796 aaKnown RBP9.06□□□□□ -0.96
KLHL42-203ENST00000540301 LRRC3BQ96PB8 259 aa9.06□□□□□ -0.96
KLHL42-203ENST00000540301 IL25Q9H293 177 aa9.06□□□□□ -0.96
KLHL42-203ENST00000540301 ASAH2Q9NR71 780 aa9.06□□□□□ -0.96
KLHL42-203ENST00000540301 CEP72Q9P209 647 aa9.06□□□□□ -0.96
KLHL42-203ENST00000540301 MBD1Q9UIS9 605 aaPredicted RBP9.06□□□□□ -0.96
KLHL42-203ENST00000540301 KIF26AQ9ULI4 1882 aaPredicted RBP9.05□□□□□ -0.96
KLHL42-203ENST00000540301 A0A087WV48 116 aa9.05□□□□□ -0.96
KLHL42-203ENST00000540301 hCG_1984214I3L0E3 225 aa9.05□□□□□ -0.96
KLHL42-203ENST00000540301 INO80B-WBP1J3KQ70 363 aa9.05□□□□□ -0.96
KLHL42-203ENST00000540301 ASAP2O43150 1006 aa9.05□□□□□ -0.96
KLHL42-203ENST00000540301 B3GAT3O94766 335 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms