RNA–Protein interactions for RNA: ENST00000539180.1

PRPF19-203, Transcript of pre-mRNA processing factor 19, humanhuman

TSL 2

Gene PRPF19, Length 441 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF19-203ENST00000539180 GOLGA8IPA6NC78 632 aa16.29■□□□□ 0.2
PRPF19-203ENST00000539180 GOLGA8JA6NMD2 632 aa16.29■□□□□ 0.2
PRPF19-203ENST00000539180 NCK2O43639 380 aa16.29■□□□□ 0.2
PRPF19-203ENST00000539180 B3GAT3O94766 335 aa16.29■□□□□ 0.2
PRPF19-203ENST00000539180 IL18RAPO95256 599 aa16.29■□□□□ 0.2
PRPF19-203ENST00000539180 URODP06132 367 aa16.29■□□□□ 0.2
PRPF19-203ENST00000539180 RPL9P32969 192 aaKnown RBP16.29■□□□□ 0.2
PRPF19-203ENST00000539180 TMEM132DQ14C87 1099 aa16.29■□□□□ 0.2
PRPF19-203ENST00000539180 SKIV2LQ15477 1246 aaKnown RBP16.29■□□□□ 0.2
PRPF19-203ENST00000539180 RTP2Q5QGT7 225 aa16.29■□□□□ 0.2
PRPF19-203ENST00000539180 KIAA0319Q5VV43 1072 aa16.29■□□□□ 0.2
PRPF19-203ENST00000539180 DCLRE1AQ6PJP8 1040 aa16.29■□□□□ 0.2
PRPF19-203ENST00000539180 HS2ST1Q7LGA3 356 aa16.29■□□□□ 0.2
PRPF19-203ENST00000539180 NT5DC4Q86YG4 428 aa16.29■□□□□ 0.2
PRPF19-203ENST00000539180 CBWD2Q8IUF1 395 aa16.29■□□□□ 0.2
PRPF19-203ENST00000539180 GUF1Q8N442 669 aaKnown RBP16.29■□□□□ 0.2
PRPF19-203ENST00000539180 MICAL1Q8TDZ2 1067 aa16.29■□□□□ 0.2
PRPF19-203ENST00000539180 HLA-CQ95604 372 aa16.29■□□□□ 0.2
PRPF19-203ENST00000539180 CCDC47Q96A33 483 aaKnown RBP16.29■□□□□ 0.2
PRPF19-203ENST00000539180 GSDMAQ96QA5 445 aa16.29■□□□□ 0.2
PRPF19-203ENST00000539180 XIRP2A4UGR9 3374 aa16.29■□□□□ 0.2
PRPF19-203ENST00000539180 DENND4AQ7Z401 1863 aa16.29■□□□□ 0.2
PRPF19-203ENST00000539180 UNC80Q8N2C7 3258 aa16.29■□□□□ 0.2
PRPF19-203ENST00000539180 PER2O15055 1255 aa16.28■□□□□ 0.2
PRPF19-203ENST00000539180 XPOTO43592 962 aaKnown RBP16.28■□□□□ 0.2
PRPF19-203ENST00000539180 CLASP2O75122 1294 aaKnown RBP16.28■□□□□ 0.2
PRPF19-203ENST00000539180 TADA2AO75478 443 aa16.28■□□□□ 0.2
PRPF19-203ENST00000539180 FGFR3P22607 806 aa16.28■□□□□ 0.2
PRPF19-203ENST00000539180 AARSP49588 968 aaKnown RBP eCLIP16.28■□□□□ 0.2
PRPF19-203ENST00000539180 GUCY2FP51841 1108 aa16.28■□□□□ 0.2
PRPF19-203ENST00000539180 DLX2Q07687 328 aaPredicted RBP16.28■□□□□ 0.2
PRPF19-203ENST00000539180 ELAVL2Q12926 359 aaKnown RBP16.28■□□□□ 0.2
PRPF19-203ENST00000539180 ADAM15Q13444 863 aa16.28■□□□□ 0.2
PRPF19-203ENST00000539180 USP41Q3LFD5 358 aa16.28■□□□□ 0.2
PRPF19-203ENST00000539180 ZCWPW2Q504Y3 356 aa16.28■□□□□ 0.2
PRPF19-203ENST00000539180 COBLL1Q53SF7 1204 aa16.28■□□□□ 0.2
PRPF19-203ENST00000539180 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.28■□□□□ 0.2
PRPF19-203ENST00000539180 RBM23Q86U06 439 aaKnown RBP16.28■□□□□ 0.2
PRPF19-203ENST00000539180 SLC9A9Q8IVB4 645 aa16.28■□□□□ 0.2
PRPF19-203ENST00000539180 GOLGA5Q8TBA6 731 aa16.28■□□□□ 0.2
PRPF19-203ENST00000539180 PIK3R5Q8WYR1 880 aa16.28■□□□□ 0.2
PRPF19-203ENST00000539180 ERCC4Q92889 916 aaPredicted RBP16.28■□□□□ 0.2
PRPF19-203ENST00000539180 B3GALT6Q96L58 329 aa16.28■□□□□ 0.2
PRPF19-203ENST00000539180 TLE6Q9H808 572 aa16.28■□□□□ 0.2
PRPF19-203ENST00000539180 RXFP1Q9HBX9 757 aa16.28■□□□□ 0.2
PRPF19-203ENST00000539180 MRPL17Q9NRX2 175 aaKnown RBP16.28■□□□□ 0.2
PRPF19-203ENST00000539180 RMND1Q9NWS8 449 aa16.28■□□□□ 0.2
PRPF19-203ENST00000539180 CLDND1Q9NY35 253 aa16.28■□□□□ 0.2
PRPF19-203ENST00000539180 TRAF3IP3Q9Y228 551 aa16.28■□□□□ 0.2
PRPF19-203ENST00000539180 PCDHA5Q9Y5H7 936 aa16.28■□□□□ 0.2
PRPF19-203ENST00000539180 HCFC2Q9Y5Z7 792 aa16.28■□□□□ 0.2
PRPF19-203ENST00000539180 MTCL1Q9Y4B5 1905 aaKnown RBP16.27■□□□□ 0.2
PRPF19-203ENST00000539180 PTPRJQ12913 1337 aa16.27■□□□□ 0.2
PRPF19-203ENST00000539180 ANO9A1A5B4 782 aa16.27■□□□□ 0.2
PRPF19-203ENST00000539180 PDXKO00764 312 aa16.27■□□□□ 0.2
PRPF19-203ENST00000539180 PPEF2O14830 753 aa16.27■□□□□ 0.2
PRPF19-203ENST00000539180 CLIC2O15247 247 aa16.27■□□□□ 0.2
PRPF19-203ENST00000539180 PRPF40AO75400 957 aaKnown RBP16.27■□□□□ 0.2
PRPF19-203ENST00000539180 CXCL14O95715 111 aa16.27■□□□□ 0.2
PRPF19-203ENST00000539180 CNPP09543 421 aaKnown RBP16.27■□□□□ 0.2
PRPF19-203ENST00000539180 BRCC3P46736 316 aa16.27■□□□□ 0.2
PRPF19-203ENST00000539180 RBM10P98175 930 aaKnown RBP16.27■□□□□ 0.2
PRPF19-203ENST00000539180 TFF2Q03403 129 aa16.27■□□□□ 0.2
PRPF19-203ENST00000539180 BMS1Q14692 1282 aaKnown RBP16.27■□□□□ 0.2
PRPF19-203ENST00000539180 NFIL3Q16649 462 aa16.27■□□□□ 0.2
PRPF19-203ENST00000539180 TMEM184AQ6ZMB5 413 aa16.27■□□□□ 0.2
PRPF19-203ENST00000539180 XXYLT1Q8NBI6 393 aa16.27■□□□□ 0.2
PRPF19-203ENST00000539180 BEST2Q8NFU1 509 aa16.27■□□□□ 0.2
PRPF19-203ENST00000539180 ATXN2LQ8WWM7 1075 aaKnown RBP16.27■□□□□ 0.2
PRPF19-203ENST00000539180 FAM212AQ96EL1 285 aa16.27■□□□□ 0.2
PRPF19-203ENST00000539180 MSLNLQ96KJ4 702 aa16.27■□□□□ 0.2
PRPF19-203ENST00000539180 KLHL5Q96PQ7 755 aa16.27■□□□□ 0.2
PRPF19-203ENST00000539180 GZF1Q9H116 711 aaPredicted RBP16.27■□□□□ 0.2
PRPF19-203ENST00000539180 KIAA1586Q9HCI6 787 aa16.27■□□□□ 0.2
PRPF19-203ENST00000539180 DMAC2Q9NW81 257 aa16.27■□□□□ 0.2
PRPF19-203ENST00000539180 CLEC1BQ9P126 229 aa16.27■□□□□ 0.2
PRPF19-203ENST00000539180 HOOK1Q9UJC3 728 aaKnown RBP16.27■□□□□ 0.2
PRPF19-203ENST00000539180 SSX2IPQ9Y2D8 614 aa16.27■□□□□ 0.2
PRPF19-203ENST00000539180 CYP2J2P51589 502 aa16.26■□□□□ 0.19
PRPF19-203ENST00000539180 SNRNP35Q16560 246 aaKnown RBP16.26■□□□□ 0.19
PRPF19-203ENST00000539180 LEXMQ3ZCV2 418 aa16.26■□□□□ 0.19
PRPF19-203ENST00000539180 ZNF658Q5TYW1 1059 aaPredicted RBP16.26■□□□□ 0.19
PRPF19-203ENST00000539180 FAM171A1Q5VUB5 890 aa16.26■□□□□ 0.19
PRPF19-203ENST00000539180 C9orf57Q5W0N0 161 aa16.26■□□□□ 0.19
PRPF19-203ENST00000539180 SMYD4Q8IYR2 804 aaPredicted RBP16.26■□□□□ 0.19
PRPF19-203ENST00000539180 CXorf38Q8TB03 319 aa16.26■□□□□ 0.19
PRPF19-203ENST00000539180 SLC22A17Q8WUG5 538 aa16.26■□□□□ 0.19
PRPF19-203ENST00000539180 SMARCE1Q969G3 411 aa16.26■□□□□ 0.19
PRPF19-203ENST00000539180 SUSD3Q96L08 255 aa16.26■□□□□ 0.19
PRPF19-203ENST00000539180 TTPALQ9BTX7 342 aa16.26■□□□□ 0.19
PRPF19-203ENST00000539180 PDE11AQ9HCR9 933 aa16.26■□□□□ 0.19
PRPF19-203ENST00000539180 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.26■□□□□ 0.19
PRPF19-203ENST00000539180 FNIP2Q9P278 1114 aa16.26■□□□□ 0.19
PRPF19-203ENST00000539180 C2orf16Q68DN1 1984 aa16.26■□□□□ 0.19
PRPF19-203ENST00000539180 ZNF233A6NK53 670 aa16.25■□□□□ 0.19
PRPF19-203ENST00000539180 I3L4J1 428 aa16.25■□□□□ 0.19
PRPF19-203ENST00000539180 PIRO00625 290 aa16.25■□□□□ 0.19
PRPF19-203ENST00000539180 C2CD2LO14523 706 aa16.25■□□□□ 0.19
PRPF19-203ENST00000539180 SYN3O14994 580 aa16.25■□□□□ 0.19
PRPF19-203ENST00000539180 TEX28O15482 410 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms