RNA–Protein interactions for RNA: ENST00000538570.5

COL4A6-208, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,528 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-208ENST00000538570 CYP2D6P10635 497 aa10.45□□□□□ -0.74
COL4A6-208ENST00000538570 UBE3AQ05086 875 aa10.45□□□□□ -0.74
COL4A6-208ENST00000538570 KYAT1Q16773 422 aa10.45□□□□□ -0.74
COL4A6-208ENST00000538570 LRRC36Q1X8D7 754 aa10.45□□□□□ -0.74
COL4A6-208ENST00000538570 MFN1Q8IWA4 741 aa10.45□□□□□ -0.74
COL4A6-208ENST00000538570 ZNF507Q8TCN5 953 aa10.45□□□□□ -0.74
COL4A6-208ENST00000538570 MRPL1Q9BYD6 325 aaKnown RBP10.45□□□□□ -0.74
COL4A6-208ENST00000538570 SELENONQ9NZV5 590 aa10.45□□□□□ -0.74
COL4A6-208ENST00000538570 EMSYQ7Z589 1322 aa10.45□□□□□ -0.74
COL4A6-208ENST00000538570 SPDYE5A6NIY4 337 aa10.45□□□□□ -0.74
COL4A6-208ENST00000538570 PSMD3O43242 534 aa10.45□□□□□ -0.74
COL4A6-208ENST00000538570 AKAP10O43572 662 aa10.45□□□□□ -0.74
COL4A6-208ENST00000538570 SPDYE7PQ495Y7 208 aa10.45□□□□□ -0.74
COL4A6-208ENST00000538570 DAB2IPQ5VWQ8 1189 aa10.45□□□□□ -0.74
COL4A6-208ENST00000538570 SWSAP1Q6NVH7 229 aa10.45□□□□□ -0.74
COL4A6-208ENST00000538570 LRIG3Q6UXM1 1119 aa10.45□□□□□ -0.74
COL4A6-208ENST00000538570 RCOR2Q8IZ40 523 aa10.45□□□□□ -0.74
COL4A6-208ENST00000538570 RTKN2Q8IZC4 609 aa10.45□□□□□ -0.74
COL4A6-208ENST00000538570 EFHBQ8N7U6 833 aa10.45□□□□□ -0.74
COL4A6-208ENST00000538570 SEC16BQ96JE7 1060 aa10.45□□□□□ -0.74
COL4A6-208ENST00000538570 RANBP17Q9H2T7 1088 aaKnown RBP10.45□□□□□ -0.74
COL4A6-208ENST00000538570 TMEM161AQ9NX61 479 aa10.45□□□□□ -0.74
COL4A6-208ENST00000538570 GABBR1Q9UBS5 961 aa10.45□□□□□ -0.74
COL4A6-208ENST00000538570 C5orf58C9J3I9 102 aa10.45□□□□□ -0.74
COL4A6-208ENST00000538570 CRKP46108 304 aa10.45□□□□□ -0.74
COL4A6-208ENST00000538570 BTBD8Q5XKL5 378 aa10.45□□□□□ -0.74
COL4A6-208ENST00000538570 KIRREL3Q8IZU9 778 aa10.45□□□□□ -0.74
COL4A6-208ENST00000538570 ZNF483Q8TF39 744 aaPredicted RBP10.45□□□□□ -0.74
COL4A6-208ENST00000538570 SIK2Q9H0K1 926 aa10.45□□□□□ -0.74
COL4A6-208ENST00000538570 NOD2Q9HC29 1040 aa10.45□□□□□ -0.74
COL4A6-208ENST00000538570 SEPT3Q9UH03 358 aa10.45□□□□□ -0.74
COL4A6-208ENST00000538570 DSEQ9UL01 958 aa10.45□□□□□ -0.74
COL4A6-208ENST00000538570 BLOC1S6Q9UL45 172 aa10.45□□□□□ -0.74
COL4A6-208ENST00000538570 USP17L10C9JJH3 530 aa10.45□□□□□ -0.74
COL4A6-208ENST00000538570 KCNN4O15554 427 aa10.45□□□□□ -0.74
COL4A6-208ENST00000538570 GSNP06396 782 aa10.45□□□□□ -0.74
COL4A6-208ENST00000538570 CLEC4FQ8N1N0 589 aa10.45□□□□□ -0.74
COL4A6-208ENST00000538570 CMTM5Q96DZ9 223 aa10.45□□□□□ -0.74
COL4A6-208ENST00000538570 VIPAS39Q9H9C1 493 aa10.45□□□□□ -0.74
COL4A6-208ENST00000538570 ZNF556Q9HAH1 456 aa10.45□□□□□ -0.74
COL4A6-208ENST00000538570 LY9Q9HBG7 655 aa10.45□□□□□ -0.74
COL4A6-208ENST00000538570 PAPOLBQ9NRJ5 636 aaKnown RBP10.45□□□□□ -0.74
COL4A6-208ENST00000538570 TRIM17Q9Y577 477 aa10.45□□□□□ -0.74
COL4A6-208ENST00000538570 TTC37Q6PGP7 1564 aa10.45□□□□□ -0.74
COL4A6-208ENST00000538570 RALAP11233 206 aa10.45□□□□□ -0.74
COL4A6-208ENST00000538570 PSMC5P62195 406 aa10.45□□□□□ -0.74
COL4A6-208ENST00000538570 WASHC5Q12768 1159 aa10.45□□□□□ -0.74
COL4A6-208ENST00000538570 TMA16Q96EY4 203 aaKnown RBP10.45□□□□□ -0.74
COL4A6-208ENST00000538570 DCUN1D1Q96GG9 259 aa10.45□□□□□ -0.74
COL4A6-208ENST00000538570 LBHD1Q9BQE6 289 aaPredicted RBP10.45□□□□□ -0.74
COL4A6-208ENST00000538570 NPHS2Q9NP85 383 aa10.45□□□□□ -0.74
COL4A6-208ENST00000538570 FAM32AQ9Y421 112 aaKnown RBP10.45□□□□□ -0.74
COL4A6-208ENST00000538570 TLR2O60603 784 aa10.44□□□□□ -0.74
COL4A6-208ENST00000538570 LCP1P13796 627 aa10.44□□□□□ -0.74
COL4A6-208ENST00000538570 CHN1P15882 459 aa10.44□□□□□ -0.74
COL4A6-208ENST00000538570 ERFP50548 548 aa10.44□□□□□ -0.74
COL4A6-208ENST00000538570 CDK17Q00537 523 aa10.44□□□□□ -0.74
COL4A6-208ENST00000538570 TRIM16LQ309B1 348 aa10.44□□□□□ -0.74
COL4A6-208ENST00000538570 SNRNP48Q6IEG0 339 aaKnown RBP10.44□□□□□ -0.74
COL4A6-208ENST00000538570 PKN3Q6P5Z2 889 aa10.44□□□□□ -0.74
COL4A6-208ENST00000538570 LXNQ9BS40 222 aa10.44□□□□□ -0.74
COL4A6-208ENST00000538570 BARHL2Q9NY43 387 aa10.44□□□□□ -0.74
COL4A6-208ENST00000538570 PDP2Q9P2J9 529 aa10.44□□□□□ -0.74
COL4A6-208ENST00000538570 ARHGAP31Q2M1Z3 1444 aa10.44□□□□□ -0.74
COL4A6-208ENST00000538570 GOLGA8RI6L899 631 aa10.44□□□□□ -0.74
COL4A6-208ENST00000538570 HSD17B4P51659 736 aa10.44□□□□□ -0.74
COL4A6-208ENST00000538570 KCNQ4P56696 695 aa10.44□□□□□ -0.74
COL4A6-208ENST00000538570 PDAP1Q13442 181 aaKnown RBP10.44□□□□□ -0.74
COL4A6-208ENST00000538570 NUP93Q8N1F7 819 aa10.44□□□□□ -0.74
COL4A6-208ENST00000538570 PHF2O75151 1096 aa10.44□□□□□ -0.74
COL4A6-208ENST00000538570 SRP72O76094 671 aaKnown RBP10.44□□□□□ -0.74
COL4A6-208ENST00000538570 BTKQ06187 659 aa10.44□□□□□ -0.74
COL4A6-208ENST00000538570 TTLL4Q14679 1199 aa10.44□□□□□ -0.74
COL4A6-208ENST00000538570 SUSD4Q5VX71 490 aa10.44□□□□□ -0.74
COL4A6-208ENST00000538570 TBC1D19Q8N5T2 526 aa10.44□□□□□ -0.74
COL4A6-208ENST00000538570 CYGBQ8WWM9 190 aa10.44□□□□□ -0.74
COL4A6-208ENST00000538570 TSPAN17Q96FV3 270 aa10.44□□□□□ -0.74
COL4A6-208ENST00000538570 KCNK16Q96T55 309 aa10.44□□□□□ -0.74
COL4A6-208ENST00000538570 LRRC1Q9BTT6 524 aa10.44□□□□□ -0.74
COL4A6-208ENST00000538570 CCDC134Q9H6E4 229 aa10.44□□□□□ -0.74
COL4A6-208ENST00000538570 SKAP2O75563 359 aaPredicted RBP10.44□□□□□ -0.74
COL4A6-208ENST00000538570 DUOXA2Q1HG44 320 aa10.44□□□□□ -0.74
COL4A6-208ENST00000538570 POTEAQ6S8J7 498 aa10.44□□□□□ -0.74
COL4A6-208ENST00000538570 SIRT2Q8IXJ6 389 aa10.44□□□□□ -0.74
COL4A6-208ENST00000538570 DDHD1Q8NEL9 900 aa10.44□□□□□ -0.74
COL4A6-208ENST00000538570 ZNF560Q96MR9 790 aa10.44□□□□□ -0.74
COL4A6-208ENST00000538570 DDX50Q9BQ39 737 aaKnown RBP10.44□□□□□ -0.74
COL4A6-208ENST00000538570 SLC7A5P2Q9GIP4 190 aa10.44□□□□□ -0.74
COL4A6-208ENST00000538570 PLEKHA5Q9HAU0 1116 aa10.44□□□□□ -0.74
COL4A6-208ENST00000538570 DYRK4Q9NR20 520 aa10.44□□□□□ -0.74
COL4A6-208ENST00000538570 PRDM4Q9UKN5 801 aa10.44□□□□□ -0.74
COL4A6-208ENST00000538570 AGO2Q9UKV8 859 aaKnown RBP10.44□□□□□ -0.74
COL4A6-208ENST00000538570 USP15Q9Y4E8 981 aaPredicted RBP10.44□□□□□ -0.74
COL4A6-208ENST00000538570 KRT87PA6NCN2 255 aa10.44□□□□□ -0.74
COL4A6-208ENST00000538570 SSTR3P32745 418 aaPredicted RBP10.44□□□□□ -0.74
COL4A6-208ENST00000538570 TPI1P60174 286 aa10.44□□□□□ -0.74
COL4A6-208ENST00000538570 SPDYAQ5MJ70 313 aa10.44□□□□□ -0.74
COL4A6-208ENST00000538570 SH2D3CQ8N5H7 860 aa10.44□□□□□ -0.74
COL4A6-208ENST00000538570 TUBGCP3Q96CW5 907 aa10.44□□□□□ -0.74
COL4A6-208ENST00000538570 EIF2AK1Q9BQI3 630 aaKnown RBP10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms