RNA–Protein interactions for RNA: ENST00000538235.2

CHFR-216, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 687 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-216ENST00000538235 FUT10Q6P4F1 479 aa14.2□□□□□ -0.14
CHFR-216ENST00000538235 HS2ST1Q7LGA3 356 aa14.2□□□□□ -0.14
CHFR-216ENST00000538235 APBB1IPQ7Z5R6 666 aaPredicted RBP14.2□□□□□ -0.14
CHFR-216ENST00000538235 VN1R2Q8NFZ6 395 aa14.2□□□□□ -0.14
CHFR-216ENST00000538235 MFSD14AQ96MC6 490 aa14.2□□□□□ -0.14
CHFR-216ENST00000538235 HERC2P3Q9BVR0 1158 aa14.2□□□□□ -0.14
CHFR-216ENST00000538235 PLEKHA5Q9HAU0 1116 aa14.2□□□□□ -0.14
CHFR-216ENST00000538235 FAN1Q9Y2M0 1017 aa14.2□□□□□ -0.14
CHFR-216ENST00000538235 RWDD3Q9Y3V2 267 aa14.2□□□□□ -0.14
CHFR-216ENST00000538235 PCDHB12Q9Y5F1 795 aa14.2□□□□□ -0.14
CHFR-216ENST00000538235 DENND4AQ7Z401 1863 aa14.2□□□□□ -0.14
CHFR-216ENST00000538235 ANO9A1A5B4 782 aa14.19□□□□□ -0.14
CHFR-216ENST00000538235 TMEM189-UBE2V1I3L0A0 370 aa14.19□□□□□ -0.14
CHFR-216ENST00000538235 LILRB3O75022 631 aa14.19□□□□□ -0.14
CHFR-216ENST00000538235 FOSL2P15408 326 aa14.19□□□□□ -0.14
CHFR-216ENST00000538235 CCNE1P24864 410 aa14.19□□□□□ -0.14
CHFR-216ENST00000538235 TMEM132DQ14C87 1099 aa14.19□□□□□ -0.14
CHFR-216ENST00000538235 PSMD6Q15008 389 aa14.19□□□□□ -0.14
CHFR-216ENST00000538235 PTPN14Q15678 1187 aa14.19□□□□□ -0.14
CHFR-216ENST00000538235 TCEAL5Q5H9L2 206 aa14.19□□□□□ -0.14
CHFR-216ENST00000538235 PLPP4Q5VZY2 271 aa14.19□□□□□ -0.14
CHFR-216ENST00000538235 C9orf57Q5W0N0 161 aa14.19□□□□□ -0.14
CHFR-216ENST00000538235 C11orf57Q6ZUT1 292 aaPredicted RBP14.19□□□□□ -0.14
CHFR-216ENST00000538235 DDX53Q86TM3 631 aaKnown RBP14.19□□□□□ -0.14
CHFR-216ENST00000538235 NELFBQ8WX92 580 aa14.19□□□□□ -0.14
CHFR-216ENST00000538235 RSPH1Q8WYR4 309 aa14.19□□□□□ -0.14
CHFR-216ENST00000538235 CCDC47Q96A33 483 aaKnown RBP14.19□□□□□ -0.14
CHFR-216ENST00000538235 MRPL38Q96DV4 380 aaKnown RBP14.19□□□□□ -0.14
CHFR-216ENST00000538235 FAM193BQ96PV7 902 aaPredicted RBP14.19□□□□□ -0.14
CHFR-216ENST00000538235 ASB7Q9H672 318 aa14.19□□□□□ -0.14
CHFR-216ENST00000538235 ADAM28Q9UKQ2 775 aa14.19□□□□□ -0.14
CHFR-216ENST00000538235 UBQLN1Q9UMX0 589 aaKnown RBP14.19□□□□□ -0.14
CHFR-216ENST00000538235 C2CD2Q9Y426 696 aa14.19□□□□□ -0.14
CHFR-216ENST00000538235 PIRO00625 290 aa14.18□□□□□ -0.14
CHFR-216ENST00000538235 LINC01565O15544 149 aa14.18□□□□□ -0.14
CHFR-216ENST00000538235 ADAM12O43184 909 aa14.18□□□□□ -0.14
CHFR-216ENST00000538235 EXOC3O60645 756 aa14.18□□□□□ -0.14
CHFR-216ENST00000538235 GLP2RO95838 553 aa14.18□□□□□ -0.14
CHFR-216ENST00000538235 TRIM49P0CI25 452 aa14.18□□□□□ -0.14
CHFR-216ENST00000538235 TRIM49CP0CI26 452 aa14.18□□□□□ -0.14
CHFR-216ENST00000538235 IGFBP4P22692 258 aa14.18□□□□□ -0.14
CHFR-216ENST00000538235 TKTP29401 623 aaKnown RBP14.18□□□□□ -0.14
CHFR-216ENST00000538235 PPM1AP35813 382 aa14.18□□□□□ -0.14
CHFR-216ENST00000538235 ALDH7A1P49419 539 aaKnown RBP14.18□□□□□ -0.14
CHFR-216ENST00000538235 AARSP49588 968 aaKnown RBP eCLIP14.18□□□□□ -0.14
CHFR-216ENST00000538235 SNRPFP62306 86 aaKnown RBP14.18□□□□□ -0.14
CHFR-216ENST00000538235 HYAL1Q12794 435 aa14.18□□□□□ -0.14
CHFR-216ENST00000538235 KYAT1Q16773 422 aa14.18□□□□□ -0.14
CHFR-216ENST00000538235 EDRF1Q3B7T1 1238 aa14.18□□□□□ -0.14
CHFR-216ENST00000538235 TIGD5Q53EQ6 642 aa14.18□□□□□ -0.14
CHFR-216ENST00000538235 PRSS55Q6UWB4 352 aaPredicted RBP14.18□□□□□ -0.14
CHFR-216ENST00000538235 RSPO2Q6UXX9 243 aaPredicted RBP14.18□□□□□ -0.14
CHFR-216ENST00000538235 VPS52Q8N1B4 723 aa14.18□□□□□ -0.14
CHFR-216ENST00000538235 MICALL1Q8N3F8 863 aa14.18□□□□□ -0.14
CHFR-216ENST00000538235 CCDC127Q96BQ5 260 aa14.18□□□□□ -0.14
CHFR-216ENST00000538235 TMEM169Q96HH4 297 aa14.18□□□□□ -0.14
CHFR-216ENST00000538235 CGRRF1Q99675 332 aa14.18□□□□□ -0.14
CHFR-216ENST00000538235 TCF25Q9BQ70 676 aa14.18□□□□□ -0.14
CHFR-216ENST00000538235 TLR9Q9NR96 1032 aa14.18□□□□□ -0.14
CHFR-216ENST00000538235 AAASQ9NRG9 546 aa14.18□□□□□ -0.14
CHFR-216ENST00000538235 INTS13Q9NVM9 706 aa14.18□□□□□ -0.14
CHFR-216ENST00000538235 LZTS1Q9Y250 596 aa14.18□□□□□ -0.14
CHFR-216ENST00000538235 C5orf42Q9H799 3197 aa14.18□□□□□ -0.14
CHFR-216ENST00000538235 NOTCH4Q99466 2003 aa14.17□□□□□ -0.14
CHFR-216ENST00000538235 C2orf71A6NGG8 1288 aa14.17□□□□□ -0.14
CHFR-216ENST00000538235 ZNF233A6NK53 670 aa14.17□□□□□ -0.14
CHFR-216ENST00000538235 GOLGA6L22H0YM25 854 aa14.17□□□□□ -0.14
CHFR-216ENST00000538235 KIAA0391O15091 583 aaKnown RBP14.17□□□□□ -0.14
CHFR-216ENST00000538235 B3GAT3O94766 335 aa14.17□□□□□ -0.14
CHFR-216ENST00000538235 IL18RAPO95256 599 aa14.17□□□□□ -0.14
CHFR-216ENST00000538235 VNN1O95497 513 aa14.17□□□□□ -0.14
CHFR-216ENST00000538235 MBD3O95983 291 aa14.17□□□□□ -0.14
CHFR-216ENST00000538235 LDHAP00338 332 aaKnown RBP14.17□□□□□ -0.14
CHFR-216ENST00000538235 SOD2P04179 222 aa14.17□□□□□ -0.14
CHFR-216ENST00000538235 ALDH2P05091 517 aa14.17□□□□□ -0.14
CHFR-216ENST00000538235 ITGB3P05106 788 aa14.17□□□□□ -0.14
CHFR-216ENST00000538235 CYP3A5P20815 502 aa14.17□□□□□ -0.14
CHFR-216ENST00000538235 MCCD1P59942 119 aaPredicted RBP14.17□□□□□ -0.14
CHFR-216ENST00000538235 TFAMQ00059 246 aaKnown RBP14.17□□□□□ -0.14
CHFR-216ENST00000538235 POU5F1Q01860 360 aaKnown RBP14.17□□□□□ -0.14
CHFR-216ENST00000538235 PPP3CAQ08209 521 aa14.17□□□□□ -0.14
CHFR-216ENST00000538235 CCDC85BQ15834 202 aaPredicted RBP14.17□□□□□ -0.14
CHFR-216ENST00000538235 KIAA0319Q5VV43 1072 aa14.17□□□□□ -0.14
CHFR-216ENST00000538235 TDRD10Q5VZ19 366 aaKnown RBP14.17□□□□□ -0.14
CHFR-216ENST00000538235 CEP135Q66GS9 1140 aa14.17□□□□□ -0.14
CHFR-216ENST00000538235 CAVIN1Q6NZI2 390 aaKnown RBP14.17□□□□□ -0.14
CHFR-216ENST00000538235 TRIML1Q8N9V2 468 aa14.17□□□□□ -0.14
CHFR-216ENST00000538235 PARD3BQ8TEW8 1205 aa14.17□□□□□ -0.14
CHFR-216ENST00000538235 DDX27Q96GQ7 796 aaKnown RBP14.17□□□□□ -0.14
CHFR-216ENST00000538235 CCDC34Q96HJ3 373 aa14.17□□□□□ -0.14
CHFR-216ENST00000538235 CHST7Q9NS84 486 aa14.17□□□□□ -0.14
CHFR-216ENST00000538235 DPP3Q9NY33 737 aa14.17□□□□□ -0.14
CHFR-216ENST00000538235 CGNQ9P2M7 1197 aaKnown RBP14.17□□□□□ -0.14
CHFR-216ENST00000538235 HOOK1Q9UJC3 728 aaKnown RBP14.17□□□□□ -0.14
CHFR-216ENST00000538235 DERAQ9Y315 318 aa14.17□□□□□ -0.14
CHFR-216ENST00000538235 NME7Q9Y5B8 376 aa14.17□□□□□ -0.14
CHFR-216ENST00000538235 UNC80Q8N2C7 3258 aa14.16□□□□□ -0.14
CHFR-216ENST00000538235 PER2O15055 1255 aa14.16□□□□□ -0.14
CHFR-216ENST00000538235 HCRTO43612 131 aa14.16□□□□□ -0.14
CHFR-216ENST00000538235 CALUO43852 315 aaPredicted RBP14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms