RNA–Protein interactions for RNA: ENST00000537981.5

RTN3-208, Transcript of reticulon 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN3, Length 2,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-208ENST00000537981 TAS2R14Q9NYV8 317 aa11.33□□□□□ -0.6
RTN3-208ENST00000537981 COG5Q9UP83 839 aa11.33□□□□□ -0.6
RTN3-208ENST00000537981 RBMX2Q9Y388 322 aaKnown RBP11.33□□□□□ -0.6
RTN3-208ENST00000537981 BAZ2AQ9UIF9 1905 aaKnown RBP11.32□□□□□ -0.6
RTN3-208ENST00000537981 ATRNO75882 1429 aa11.32□□□□□ -0.6
RTN3-208ENST00000537981 BTNL10A8MVZ5 291 aa11.32□□□□□ -0.6
RTN3-208ENST00000537981 RASA4BC9J798 803 aa11.32□□□□□ -0.6
RTN3-208ENST00000537981 KLRF2D3W0D1 207 aa11.32□□□□□ -0.6
RTN3-208ENST00000537981 TRAF5O00463 557 aa11.32□□□□□ -0.6
RTN3-208ENST00000537981 TXNDC9O14530 226 aa11.32□□□□□ -0.6
RTN3-208ENST00000537981 CYP26A1O43174 497 aa11.32□□□□□ -0.6
RTN3-208ENST00000537981 RASA4O43374 803 aa11.32□□□□□ -0.6
RTN3-208ENST00000537981 ADCY3O60266 1144 aa11.32□□□□□ -0.6
RTN3-208ENST00000537981 OXSR1O95747 527 aaPredicted RBP11.32□□□□□ -0.6
RTN3-208ENST00000537981 COG7P83436 770 aa11.32□□□□□ -0.6
RTN3-208ENST00000537981 PFKPQ01813 784 aa11.32□□□□□ -0.6
RTN3-208ENST00000537981 MAPK6Q16659 721 aa11.32□□□□□ -0.6
RTN3-208ENST00000537981 TMEM259Q4ZIN3 620 aa11.32□□□□□ -0.6
RTN3-208ENST00000537981 ARHGEF18Q6ZSZ5 1173 aa11.32□□□□□ -0.6
RTN3-208ENST00000537981 LNX1Q8TBB1 728 aaPredicted RBP11.32□□□□□ -0.6
RTN3-208ENST00000537981 PYDC1Q8WXC3 89 aa11.32□□□□□ -0.6
RTN3-208ENST00000537981 SYN2Q92777 582 aaPredicted RBP11.32□□□□□ -0.6
RTN3-208ENST00000537981 DGCR14Q96DF8 476 aaKnown RBP11.32□□□□□ -0.6
RTN3-208ENST00000537981 SERPINB12Q96P63 405 aa11.32□□□□□ -0.6
RTN3-208ENST00000537981 RBM38Q9H0Z9 239 aaKnown RBP11.32□□□□□ -0.6
RTN3-208ENST00000537981 ACP6Q9NPH0 428 aa11.32□□□□□ -0.6
RTN3-208ENST00000537981 CYLDQ9NQC7 956 aa11.32□□□□□ -0.6
RTN3-208ENST00000537981 HEY2Q9UBP5 337 aa11.32□□□□□ -0.6
RTN3-208ENST00000537981 MTRF1LQ9UGC7 380 aaKnown RBP11.32□□□□□ -0.6
RTN3-208ENST00000537981 TIMM22Q9Y584 194 aa11.32□□□□□ -0.6
RTN3-208ENST00000537981 KANSL1LA0AUZ9 987 aa11.32□□□□□ -0.6
RTN3-208ENST00000537981 FBP2O00757 339 aa11.32□□□□□ -0.6
RTN3-208ENST00000537981 DNAJC6O75061 913 aa11.32□□□□□ -0.6
RTN3-208ENST00000537981 FGFR1OPO95684 399 aaKnown RBP11.32□□□□□ -0.6
RTN3-208ENST00000537981 RGS2P41220 211 aa11.32□□□□□ -0.6
RTN3-208ENST00000537981 PIK3CAP42336 1068 aa11.32□□□□□ -0.6
RTN3-208ENST00000537981 TECP42680 631 aa11.32□□□□□ -0.6
RTN3-208ENST00000537981 KCNQ4P56696 695 aa11.32□□□□□ -0.6
RTN3-208ENST00000537981 TROAPQ12815 778 aa11.32□□□□□ -0.6
RTN3-208ENST00000537981 CYLC2Q14093 348 aaPredicted RBP11.32□□□□□ -0.6
RTN3-208ENST00000537981 NONOQ15233 471 aaKnown RBP eCLIP11.32□□□□□ -0.6
RTN3-208ENST00000537981 HP1BP3Q5SSJ5 553 aaPredicted RBP11.32□□□□□ -0.6
RTN3-208ENST00000537981 ARL6IP4Q66PJ3 421 aaKnown RBP11.32□□□□□ -0.6
RTN3-208ENST00000537981 C7orf43Q8WVR3 580 aa11.32□□□□□ -0.6
RTN3-208ENST00000537981 PPP2R3CQ969Q6 453 aa11.32□□□□□ -0.6
RTN3-208ENST00000537981 C9orf72Q96LT7 481 aa11.32□□□□□ -0.6
RTN3-208ENST00000537981 C7orf25Q9BPX7 421 aa11.32□□□□□ -0.6
RTN3-208ENST00000537981 PYM1Q9BRP8 204 aaKnown RBP11.32□□□□□ -0.6
RTN3-208ENST00000537981 INO80BQ9C086 356 aaPredicted RBP11.32□□□□□ -0.6
RTN3-208ENST00000537981 ZBTB3Q9H5J0 574 aa11.32□□□□□ -0.6
RTN3-208ENST00000537981 PSTPIP2Q9H939 334 aa11.32□□□□□ -0.6
RTN3-208ENST00000537981 QTRT2Q9H974 415 aaKnown RBP11.32□□□□□ -0.6
RTN3-208ENST00000537981 STX8Q9UNK0 236 aa11.32□□□□□ -0.6
RTN3-208ENST00000537981 MYH14Q7Z406 1995 aaKnown RBP11.31□□□□□ -0.6
RTN3-208ENST00000537981 CCDC22O60826 627 aa11.31□□□□□ -0.6
RTN3-208ENST00000537981 GCP02774 474 aa11.31□□□□□ -0.6
RTN3-208ENST00000537981 S100BP04271 92 aaPredicted RBP11.31□□□□□ -0.6
RTN3-208ENST00000537981 PEX2P28328 305 aa11.31□□□□□ -0.6
RTN3-208ENST00000537981 KPNA1P52294 538 aaPredicted RBP11.31□□□□□ -0.6
RTN3-208ENST00000537981 IL9RQ01113 521 aa11.31□□□□□ -0.6
RTN3-208ENST00000537981 CACNB1Q02641 598 aaPredicted RBP11.31□□□□□ -0.6
RTN3-208ENST00000537981 GRM2Q14416 872 aa11.31□□□□□ -0.6
RTN3-208ENST00000537981 FAM182AQ5T1J6 154 aa11.31□□□□□ -0.6
RTN3-208ENST00000537981 C1orf228Q6PIY5 440 aa11.31□□□□□ -0.6
RTN3-208ENST00000537981 RASSF3Q86WH2 238 aa11.31□□□□□ -0.6
RTN3-208ENST00000537981 PDSS2Q86YH6 399 aa11.31□□□□□ -0.6
RTN3-208ENST00000537981 ZBED8Q8IZ13 594 aa11.31□□□□□ -0.6
RTN3-208ENST00000537981 RNF169Q8NCN4 708 aa11.31□□□□□ -0.6
RTN3-208ENST00000537981 OR6Y1Q8NGX8 325 aa11.31□□□□□ -0.6
RTN3-208ENST00000537981 TMC2Q8TDI7 906 aa11.31□□□□□ -0.6
RTN3-208ENST00000537981 PPP4R1Q8TF05 950 aa11.31□□□□□ -0.6
RTN3-208ENST00000537981 GRAMD1AQ96CP6 724 aa11.31□□□□□ -0.6
RTN3-208ENST00000537981 GPCPD1Q9NPB8 672 aa11.31□□□□□ -0.6
RTN3-208ENST00000537981 SFMBT1Q9UHJ3 866 aa11.31□□□□□ -0.6
RTN3-208ENST00000537981 TIAM2Q8IVF5 1701 aa11.31□□□□□ -0.6
RTN3-208ENST00000537981 ADGRA3Q8IWK6 1321 aa11.31□□□□□ -0.6
RTN3-208ENST00000537981 FAM187AA6NFU0 413 aa11.31□□□□□ -0.6
RTN3-208ENST00000537981 FAM47DPA6NHR8 397 aa11.31□□□□□ -0.6
RTN3-208ENST00000537981 TMX2-CTNND1H3BSU7 103 aa11.31□□□□□ -0.6
RTN3-208ENST00000537981 PHF2O75151 1096 aa11.31□□□□□ -0.6
RTN3-208ENST00000537981 PGM1P36871 562 aa11.31□□□□□ -0.6
RTN3-208ENST00000537981 RELAQ04206 551 aa11.31□□□□□ -0.6
RTN3-208ENST00000537981 DHX34Q14147 1143 aaKnown RBP11.31□□□□□ -0.6
RTN3-208ENST00000537981 CNNM4Q6P4Q7 775 aa11.31□□□□□ -0.6
RTN3-208ENST00000537981 UGT2A3Q6UWM9 527 aa11.31□□□□□ -0.6
RTN3-208ENST00000537981 TMTC3Q6ZXV5 915 aa11.31□□□□□ -0.6
RTN3-208ENST00000537981 KCNK18Q7Z418 384 aa11.31□□□□□ -0.6
RTN3-208ENST00000537981 GLYCTKQ8IVS8 523 aa11.31□□□□□ -0.6
RTN3-208ENST00000537981 ZFPM1Q8IX07 1006 aa11.31□□□□□ -0.6
RTN3-208ENST00000537981 HEPHQ9BQS7 1158 aa11.31□□□□□ -0.6
RTN3-208ENST00000537981 NUP85Q9BW27 656 aa11.31□□□□□ -0.6
RTN3-208ENST00000537981 ROPN1BQ9BZX4 212 aaPredicted RBP11.31□□□□□ -0.6
RTN3-208ENST00000537981 SENP6Q9GZR1 1112 aaPredicted RBP11.31□□□□□ -0.6
RTN3-208ENST00000537981 CNNM2Q9H8M5 875 aa11.31□□□□□ -0.6
RTN3-208ENST00000537981 ROPN1Q9HAT0 212 aaPredicted RBP11.31□□□□□ -0.6
RTN3-208ENST00000537981 PRDM11Q9NQV5 511 aa11.31□□□□□ -0.6
RTN3-208ENST00000537981 SELENONQ9NZV5 590 aa11.31□□□□□ -0.6
RTN3-208ENST00000537981 ADAMTS6Q9UKP5 1117 aa11.31□□□□□ -0.6
RTN3-208ENST00000537981 NENFQ9UMX5 172 aa11.31□□□□□ -0.6
RTN3-208ENST00000537981 ZNF148Q9UQR1 794 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms