RNA–Protein interactions for RNA: ENST00000536540.5

AP000943.3-201, humanhuman

TSL 3 BASIC

Gene AP000943.3, Length 954 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000943.3-201ENST00000536540 SMC1AQ14683 1233 aaKnown RBP17.15■□□□□ 0.34
AP000943.3-201ENST00000536540 NFIL3Q16649 462 aa17.15■□□□□ 0.34
AP000943.3-201ENST00000536540 ZCWPW2Q504Y3 356 aa17.15■□□□□ 0.34
AP000943.3-201ENST00000536540 SPATA1Q5VX52 437 aa17.15■□□□□ 0.34
AP000943.3-201ENST00000536540 PLPP4Q5VZY2 271 aa17.15■□□□□ 0.34
AP000943.3-201ENST00000536540 ISM2Q6H9L7 571 aa17.15■□□□□ 0.34
AP000943.3-201ENST00000536540 ADSSL1Q8N142 457 aa17.15■□□□□ 0.34
AP000943.3-201ENST00000536540 HASPINQ8TF76 798 aa17.15■□□□□ 0.34
AP000943.3-201ENST00000536540 DMAC2Q9NW81 257 aa17.15■□□□□ 0.34
AP000943.3-201ENST00000536540 FRMD4BQ9Y2L6 1034 aa17.15■□□□□ 0.34
AP000943.3-201ENST00000536540 TRAPPC3O43617 180 aa17.14■□□□□ 0.33
AP000943.3-201ENST00000536540 TMEM191BP0C7N4 346 aa17.14■□□□□ 0.33
AP000943.3-201ENST00000536540 CA8P35219 290 aa17.14■□□□□ 0.33
AP000943.3-201ENST00000536540 ERVFC1P60507 584 aa17.14■□□□□ 0.33
AP000943.3-201ENST00000536540 TFAMQ00059 246 aaKnown RBP17.14■□□□□ 0.33
AP000943.3-201ENST00000536540 EDRF1Q3B7T1 1238 aa17.14■□□□□ 0.33
AP000943.3-201ENST00000536540 EFCAB13Q8IY85 973 aa17.14■□□□□ 0.33
AP000943.3-201ENST00000536540 RDH13Q8NBN7 331 aa17.14■□□□□ 0.33
AP000943.3-201ENST00000536540 CACTINQ8WUQ7 758 aaKnown RBP17.14■□□□□ 0.33
AP000943.3-201ENST00000536540 FNBP1Q96RU3 617 aa17.14■□□□□ 0.33
AP000943.3-201ENST00000536540 VN1R3Q9BXE9 311 aa17.14■□□□□ 0.33
AP000943.3-201ENST00000536540 PDE11AQ9HCR9 933 aa17.14■□□□□ 0.33
AP000943.3-201ENST00000536540 NUB1Q9Y5A7 615 aa17.14■□□□□ 0.33
AP000943.3-201ENST00000536540 PRRC2BQ5JSZ5 2229 aaKnown RBP17.13■□□□□ 0.33
AP000943.3-201ENST00000536540 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.13■□□□□ 0.33
AP000943.3-201ENST00000536540 CTSAP10619 480 aa17.13■□□□□ 0.33
AP000943.3-201ENST00000536540 WNT7BP56706 349 aa17.13■□□□□ 0.33
AP000943.3-201ENST00000536540 LRRC63Q05C16 580 aa17.13■□□□□ 0.33
AP000943.3-201ENST00000536540 CYP24A1Q07973 514 aa17.13■□□□□ 0.33
AP000943.3-201ENST00000536540 PSMD6Q15008 389 aa17.13■□□□□ 0.33
AP000943.3-201ENST00000536540 USP41Q3LFD5 358 aa17.13■□□□□ 0.33
AP000943.3-201ENST00000536540 CEP135Q66GS9 1140 aa17.13■□□□□ 0.33
AP000943.3-201ENST00000536540 CENPPQ6IPU0 288 aa17.13■□□□□ 0.33
AP000943.3-201ENST00000536540 KIAA1841Q6NSI8 718 aa17.13■□□□□ 0.33
AP000943.3-201ENST00000536540 WDR49Q8IV35 697 aa17.13■□□□□ 0.33
AP000943.3-201ENST00000536540 RNF168Q8IYW5 571 aaPredicted RBP17.13■□□□□ 0.33
AP000943.3-201ENST00000536540 DHTKD1Q96HY7 919 aaPredicted RBP17.13■□□□□ 0.33
AP000943.3-201ENST00000536540 ANKRD36BP1Q96IX9 119 aa17.13■□□□□ 0.33
AP000943.3-201ENST00000536540 SSX2IPQ9Y2D8 614 aa17.13■□□□□ 0.33
AP000943.3-201ENST00000536540 FSD2A1L4K1 749 aa17.12■□□□□ 0.33
AP000943.3-201ENST00000536540 EFEMP2O95967 443 aa17.12■□□□□ 0.33
AP000943.3-201ENST00000536540 DLATP10515 647 aaKnown RBP17.12■□□□□ 0.33
AP000943.3-201ENST00000536540 PTMSP20962 102 aa17.12■□□□□ 0.33
AP000943.3-201ENST00000536540 BMP6P22004 513 aa17.12■□□□□ 0.33
AP000943.3-201ENST00000536540 GLUD2P49448 558 aa17.12■□□□□ 0.33
AP000943.3-201ENST00000536540 GUCY2FP51841 1108 aa17.12■□□□□ 0.33
AP000943.3-201ENST00000536540 ADAM9Q13443 819 aa17.12■□□□□ 0.33
AP000943.3-201ENST00000536540 PTPN14Q15678 1187 aa17.12■□□□□ 0.33
AP000943.3-201ENST00000536540 CCDC85BQ15834 202 aaPredicted RBP17.12■□□□□ 0.33
AP000943.3-201ENST00000536540 TCEAL5Q5H9L2 206 aa17.12■□□□□ 0.33
AP000943.3-201ENST00000536540 KLHL10Q6JEL2 608 aa17.12■□□□□ 0.33
AP000943.3-201ENST00000536540 USP37Q86T82 979 aa17.12■□□□□ 0.33
AP000943.3-201ENST00000536540 C3orf58Q8NDZ4 430 aa17.12■□□□□ 0.33
AP000943.3-201ENST00000536540 PPM1EQ8WY54 764 aa17.12■□□□□ 0.33
AP000943.3-201ENST00000536540 CCDC127Q96BQ5 260 aa17.12■□□□□ 0.33
AP000943.3-201ENST00000536540 GPR62Q9BZJ7 368 aa17.12■□□□□ 0.33
AP000943.3-201ENST00000536540 MRPL17Q9NRX2 175 aaKnown RBP17.12■□□□□ 0.33
AP000943.3-201ENST00000536540 DPP3Q9NY33 737 aa17.12■□□□□ 0.33
AP000943.3-201ENST00000536540 PCDHGC5Q9Y5F6 944 aa17.12■□□□□ 0.33
AP000943.3-201ENST00000536540 IRAK3Q9Y616 596 aa17.12■□□□□ 0.33
AP000943.3-201ENST00000536540 SPTBN5Q9NRC6 3674 aaKnown RBP17.12■□□□□ 0.33
AP000943.3-201ENST00000536540 PLXNA4Q9HCM2 1894 aa17.12■□□□□ 0.33
AP000943.3-201ENST00000536540 BICDL2A1A5D9 508 aa17.11■□□□□ 0.33
AP000943.3-201ENST00000536540 CETN3O15182 167 aa17.11■□□□□ 0.33
AP000943.3-201ENST00000536540 MAPK13O15264 365 aa17.11■□□□□ 0.33
AP000943.3-201ENST00000536540 TNNC2P02585 160 aa17.11■□□□□ 0.33
AP000943.3-201ENST00000536540 PAX3P23760 479 aa17.11■□□□□ 0.33
AP000943.3-201ENST00000536540 CCNE1P24864 410 aa17.11■□□□□ 0.33
AP000943.3-201ENST00000536540 DSG1Q02413 1049 aa17.11■□□□□ 0.33
AP000943.3-201ENST00000536540 SKIV2LQ15477 1246 aaKnown RBP17.11■□□□□ 0.33
AP000943.3-201ENST00000536540 DUOXA2Q1HG44 320 aa17.11■□□□□ 0.33
AP000943.3-201ENST00000536540 FAM171A1Q5VUB5 890 aa17.11■□□□□ 0.33
AP000943.3-201ENST00000536540 C9orf57Q5W0N0 161 aa17.11■□□□□ 0.33
AP000943.3-201ENST00000536540 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.11■□□□□ 0.33
AP000943.3-201ENST00000536540 GPR65Q8IYL9 337 aa17.11■□□□□ 0.33
AP000943.3-201ENST00000536540 MRPL43Q8N983 215 aaKnown RBP17.11■□□□□ 0.33
AP000943.3-201ENST00000536540 MFSD14AQ96MC6 490 aa17.11■□□□□ 0.33
AP000943.3-201ENST00000536540 CDCA3Q99618 268 aaPredicted RBP17.11■□□□□ 0.33
AP000943.3-201ENST00000536540 CGRRF1Q99675 332 aa17.11■□□□□ 0.33
AP000943.3-201ENST00000536540 TTPALQ9BTX7 342 aa17.11■□□□□ 0.33
AP000943.3-201ENST00000536540 MTMR12Q9C0I1 747 aa17.11■□□□□ 0.33
AP000943.3-201ENST00000536540 CHST7Q9NS84 486 aa17.11■□□□□ 0.33
AP000943.3-201ENST00000536540 INTS13Q9NVM9 706 aa17.11■□□□□ 0.33
AP000943.3-201ENST00000536540 ITGA11Q9UKX5 1188 aa17.11■□□□□ 0.33
AP000943.3-201ENST00000536540 R3HCC1Q9Y3T6 440 aaKnown RBP17.11■□□□□ 0.33
AP000943.3-201ENST00000536540 PRUNE2Q8WUY3 3088 aa17.11■□□□□ 0.33
AP000943.3-201ENST00000536540 ANO9A1A5B4 782 aa17.1■□□□□ 0.33
AP000943.3-201ENST00000536540 C2orf71A6NGG8 1288 aa17.1■□□□□ 0.33
AP000943.3-201ENST00000536540 HIDE1A8MVS5 230 aa17.1■□□□□ 0.33
AP000943.3-201ENST00000536540 C2CD2LO14523 706 aa17.1■□□□□ 0.33
AP000943.3-201ENST00000536540 NCK2O43639 380 aa17.1■□□□□ 0.33
AP000943.3-201ENST00000536540 AKAP3O75969 853 aa17.1■□□□□ 0.33
AP000943.3-201ENST00000536540 CXCL14O95715 111 aa17.1■□□□□ 0.33
AP000943.3-201ENST00000536540 EPB41P11171 864 aaKnown RBP17.1■□□□□ 0.33
AP000943.3-201ENST00000536540 CD44P16070 742 aaKnown RBP17.1■□□□□ 0.33
AP000943.3-201ENST00000536540 TNNI1P19237 187 aa17.1■□□□□ 0.33
AP000943.3-201ENST00000536540 PSMC2P35998 433 aaKnown RBP17.1■□□□□ 0.33
AP000943.3-201ENST00000536540 BRCC3P46736 316 aa17.1■□□□□ 0.33
AP000943.3-201ENST00000536540 CASP4P49662 377 aa17.1■□□□□ 0.33
AP000943.3-201ENST00000536540 FKBP3Q00688 224 aaKnown RBP17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms