RNA–Protein interactions for RNA: ENST00000534356.1

CASP4-213, Transcript of caspase 4, humanhuman

TSL 1 (best)

Gene CASP4, Length 771 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-213ENST00000534356 XDHP47989 1333 aa8.19□□□□□ -1.1
CASP4-213ENST00000534356 GOLGA6L6A8MZA4 724 aa8.18□□□□□ -1.1
CASP4-213ENST00000534356 NT5C1B-RDH14C9J2C7 533 aa8.18□□□□□ -1.1
CASP4-213ENST00000534356 ERC2O15083 957 aa8.18□□□□□ -1.1
CASP4-213ENST00000534356 UBXN7O94888 489 aa8.18□□□□□ -1.1
CASP4-213ENST00000534356 POMCP01189 267 aa8.18□□□□□ -1.1
CASP4-213ENST00000534356 CD1AP06126 327 aa8.18□□□□□ -1.1
CASP4-213ENST00000534356 ACRV1P26436 265 aa8.18□□□□□ -1.1
CASP4-213ENST00000534356 CRHR2Q13324 411 aa8.18□□□□□ -1.1
CASP4-213ENST00000534356 CCDC157Q569K6 752 aa8.18□□□□□ -1.1
CASP4-213ENST00000534356 SLC4A10Q6U841 1118 aa8.18□□□□□ -1.1
CASP4-213ENST00000534356 OVCH2Q7RTZ1 564 aa8.18□□□□□ -1.1
CASP4-213ENST00000534356 C8orf48Q96LL4 319 aa8.18□□□□□ -1.1
CASP4-213ENST00000534356 LRFN3Q9BTN0 628 aa8.18□□□□□ -1.1
CASP4-213ENST00000534356 C1QTNF3Q9BXJ4 246 aa8.18□□□□□ -1.1
CASP4-213ENST00000534356 OBP2AQ9NY56 170 aa8.18□□□□□ -1.1
CASP4-213ENST00000534356 FAM30AQ9NZY2 134 aa8.18□□□□□ -1.1
CASP4-213ENST00000534356 ABCF2Q9UG63 623 aa8.18□□□□□ -1.1
CASP4-213ENST00000534356 STXBP5LQ9Y2K9 1186 aa8.18□□□□□ -1.1
CASP4-213ENST00000534356 TOPBP1Q92547 1522 aa8.18□□□□□ -1.1
CASP4-213ENST00000534356 DRGXA6NNA5 263 aa8.17□□□□□ -1.1
CASP4-213ENST00000534356 KRTAP9-7A8MTY7 169 aa8.17□□□□□ -1.1
CASP4-213ENST00000534356 F2RL2O00254 374 aa8.17□□□□□ -1.1
CASP4-213ENST00000534356 LEFTY2O00292 366 aa8.17□□□□□ -1.1
CASP4-213ENST00000534356 PLSCR1O15162 318 aa8.17□□□□□ -1.1
CASP4-213ENST00000534356 ARIH2O95376 493 aa8.17□□□□□ -1.1
CASP4-213ENST00000534356 AMHP03971 560 aa8.17□□□□□ -1.1
CASP4-213ENST00000534356 SLC6A2P23975 617 aa8.17□□□□□ -1.1
CASP4-213ENST00000534356 SMARCA1P28370 1054 aa8.17□□□□□ -1.1
CASP4-213ENST00000534356 SLC6A4P31645 630 aa8.17□□□□□ -1.1
CASP4-213ENST00000534356 CNGB1Q14028 1251 aaPredicted RBP8.17□□□□□ -1.1
CASP4-213ENST00000534356 ATP2B3Q16720 1220 aa8.17□□□□□ -1.1
CASP4-213ENST00000534356 SPATS1Q496A3 300 aa8.17□□□□□ -1.1
CASP4-213ENST00000534356 FLYWCH1Q4VC44 716 aa8.17□□□□□ -1.1
CASP4-213ENST00000534356 PABPC1LQ4VXU2 614 aaKnown RBP8.17□□□□□ -1.1
CASP4-213ENST00000534356 KLHDC4Q8TBB5 520 aa8.17□□□□□ -1.1
CASP4-213ENST00000534356 PHACTR3Q96KR7 559 aa8.17□□□□□ -1.1
CASP4-213ENST00000534356 FAM193BQ96PV7 902 aaPredicted RBP8.17□□□□□ -1.1
CASP4-213ENST00000534356 LMBRD1Q9NUN5 540 aa8.17□□□□□ -1.1
CASP4-213ENST00000534356 TESMINQ9Y4I5 508 aa8.17□□□□□ -1.1
CASP4-213ENST00000534356 CCDC88BA6NC98 1476 aa8.17□□□□□ -1.1
CASP4-213ENST00000534356 IFT140Q96RY7 1462 aa8.17□□□□□ -1.1
CASP4-213ENST00000534356 TOP2AP11388 1531 aaKnown RBP8.17□□□□□ -1.1
CASP4-213ENST00000534356 EIF4G3O43432 1585 aaKnown RBP8.17□□□□□ -1.1
CASP4-213ENST00000534356 B3GALT2O43825 422 aa8.16□□□□□ -1.1
CASP4-213ENST00000534356 TUSC2O75896 110 aa8.16□□□□□ -1.1
CASP4-213ENST00000534356 MTHFD1P11586 935 aaKnown RBP8.16□□□□□ -1.1
CASP4-213ENST00000534356 MGAT1P26572 445 aa8.16□□□□□ -1.1
CASP4-213ENST00000534356 HTR1BP28222 390 aa8.16□□□□□ -1.1
CASP4-213ENST00000534356 CHN2P52757 468 aa8.16□□□□□ -1.1
CASP4-213ENST00000534356 NKX6-1P78426 367 aaPredicted RBP8.16□□□□□ -1.1
CASP4-213ENST00000534356 GRM3Q14832 879 aa8.16□□□□□ -1.1
CASP4-213ENST00000534356 MED25Q71SY5 747 aa8.16□□□□□ -1.1
CASP4-213ENST00000534356 SH2D3CQ8N5H7 860 aa8.16□□□□□ -1.1
CASP4-213ENST00000534356 IL17RDQ8NFM7 739 aa8.16□□□□□ -1.1
CASP4-213ENST00000534356 PLBD2Q8NHP8 589 aa8.16□□□□□ -1.1
CASP4-213ENST00000534356 CDK5RAP3Q96JB5 506 aa8.16□□□□□ -1.1
CASP4-213ENST00000534356 GSTO2Q9H4Y5 243 aa8.16□□□□□ -1.1
CASP4-213ENST00000534356 C1orf112Q9NSG2 853 aa8.16□□□□□ -1.1
CASP4-213ENST00000534356 A6NNZ2 444 aa8.15□□□□□ -1.1
CASP4-213ENST00000534356 TYRP14679 529 aa8.15□□□□□ -1.1
CASP4-213ENST00000534356 APOBEC3AP31941 199 aaPredicted RBP8.15□□□□□ -1.1
CASP4-213ENST00000534356 IL12RB1P42701 662 aa8.15□□□□□ -1.1
CASP4-213ENST00000534356 NHLH2Q02577 135 aa8.15□□□□□ -1.1
CASP4-213ENST00000534356 SPDYAQ5MJ70 313 aa8.15□□□□□ -1.1
CASP4-213ENST00000534356 METRNLQ641Q3 311 aa8.15□□□□□ -1.1
CASP4-213ENST00000534356 EXTL1Q92935 676 aa8.15□□□□□ -1.1
CASP4-213ENST00000534356 CDK5RAP1Q96SZ6 601 aaKnown RBP8.15□□□□□ -1.1
CASP4-213ENST00000534356 ARMT1Q9H993 441 aa8.15□□□□□ -1.1
CASP4-213ENST00000534356 PNPOQ9NVS9 261 aa8.15□□□□□ -1.1
CASP4-213ENST00000534356 TSC22D4Q9Y3Q8 395 aa8.15□□□□□ -1.1
CASP4-213ENST00000534356 RAD54L2Q9Y4B4 1467 aa8.14□□□□□ -1.11
CASP4-213ENST00000534356 GRXCR1A8MXD5 290 aa8.14□□□□□ -1.11
CASP4-213ENST00000534356 H3BUI4 141 aa8.14□□□□□ -1.11
CASP4-213ENST00000534356 PRSS23O95084 383 aa8.14□□□□□ -1.11
CASP4-213ENST00000534356 ITGB1P05556 798 aa8.14□□□□□ -1.11
CASP4-213ENST00000534356 ALAS1P13196 640 aa8.14□□□□□ -1.11
CASP4-213ENST00000534356 PRDX5P30044 214 aa8.14□□□□□ -1.11
CASP4-213ENST00000534356 PLS1Q14651 629 aa8.14□□□□□ -1.11
CASP4-213ENST00000534356 HSP90AB2PQ58FF8 381 aa8.14□□□□□ -1.11
CASP4-213ENST00000534356 PRRT2Q7Z6L0 340 aaPredicted RBP8.14□□□□□ -1.11
CASP4-213ENST00000534356 FAM90A1Q86YD7 464 aa8.14□□□□□ -1.11
CASP4-213ENST00000534356 TMPRSS6Q8IU80 811 aa8.14□□□□□ -1.11
CASP4-213ENST00000534356 NLGN4YQ8NFZ3 816 aaPredicted RBP8.14□□□□□ -1.11
CASP4-213ENST00000534356 SLC35A4Q96G79 324 aa8.14□□□□□ -1.11
CASP4-213ENST00000534356 NEU1Q99519 415 aa8.14□□□□□ -1.11
CASP4-213ENST00000534356 C1orf43Q9BWL3 253 aa8.14□□□□□ -1.11
CASP4-213ENST00000534356 PRDM2Q13029 1718 aa8.14□□□□□ -1.11
CASP4-213ENST00000534356 TDRD9Q8NDG6 1382 aaKnown RBP8.13□□□□□ -1.11
CASP4-213ENST00000534356 CDHR4A6H8M9 788 aa8.13□□□□□ -1.11
CASP4-213ENST00000534356 SLC43A1O75387 559 aa8.13□□□□□ -1.11
CASP4-213ENST00000534356 FTH1P19P0C7X4 201 aa8.13□□□□□ -1.11
CASP4-213ENST00000534356 GBX1Q14549 363 aa8.13□□□□□ -1.11
CASP4-213ENST00000534356 LLGL1Q15334 1064 aa8.13□□□□□ -1.11
CASP4-213ENST00000534356 USP39Q53GS9 565 aaKnown RBP8.13□□□□□ -1.11
CASP4-213ENST00000534356 FAM102AQ5T9C2 384 aaPredicted RBP8.13□□□□□ -1.11
CASP4-213ENST00000534356 NPNTQ6UXI9 565 aa8.13□□□□□ -1.11
CASP4-213ENST00000534356 IL17DQ8TAD2 202 aa8.13□□□□□ -1.11
CASP4-213ENST00000534356 FAM167AQ96KS9 214 aa8.13□□□□□ -1.11
CASP4-213ENST00000534356 PACSIN1Q9BY11 444 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms