RNA–Protein interactions for RNA: ENST00000534143.5

CMTM1-220, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 781 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-220ENST00000534143 FAM102BQ5T8I3 360 aa6.74□□□□□ -1.33
CMTM1-220ENST00000534143 CENPPQ6IPU0 288 aa6.74□□□□□ -1.33
CMTM1-220ENST00000534143 EFCAB12Q6NXP0 572 aa6.74□□□□□ -1.33
CMTM1-220ENST00000534143 FOXR2Q6PJQ5 311 aa6.74□□□□□ -1.33
CMTM1-220ENST00000534143 MTHFD1LQ6UB35 978 aa6.74□□□□□ -1.33
CMTM1-220ENST00000534143 CXCL17Q6UXB2 119 aa6.74□□□□□ -1.33
CMTM1-220ENST00000534143 RNF180Q86T96 592 aa6.74□□□□□ -1.33
CMTM1-220ENST00000534143 DHX40Q8IX18 779 aaKnown RBP6.74□□□□□ -1.33
CMTM1-220ENST00000534143 MYCT1Q8N699 235 aa6.74□□□□□ -1.33
CMTM1-220ENST00000534143 PCSK9Q8NBP7 692 aaKnown RBP6.74□□□□□ -1.33
CMTM1-220ENST00000534143 ENOX1Q8TC92 643 aaKnown RBP6.74□□□□□ -1.33
CMTM1-220ENST00000534143 ASAP3Q8TDY4 903 aa6.74□□□□□ -1.33
CMTM1-220ENST00000534143 SCFD1Q8WVM8 642 aa6.74□□□□□ -1.33
CMTM1-220ENST00000534143 TCP11Q8WWU5 503 aa6.74□□□□□ -1.33
CMTM1-220ENST00000534143 WFDC12Q8WWY7 111 aa6.74□□□□□ -1.33
CMTM1-220ENST00000534143 SLC7A3Q8WY07 619 aa6.74□□□□□ -1.33
CMTM1-220ENST00000534143 BSNDQ8WZ55 320 aa6.74□□□□□ -1.33
CMTM1-220ENST00000534143 TMEM143Q96AN5 459 aa6.74□□□□□ -1.33
CMTM1-220ENST00000534143 DHTKD1Q96HY7 919 aaPredicted RBP6.74□□□□□ -1.33
CMTM1-220ENST00000534143 CCDC43Q96MW1 224 aaKnown RBP6.74□□□□□ -1.33
CMTM1-220ENST00000534143 JPH2Q9BR39 696 aaPredicted RBP6.74□□□□□ -1.33
CMTM1-220ENST00000534143 KATNAL1Q9BW62 490 aa6.74□□□□□ -1.33
CMTM1-220ENST00000534143 SSBP4Q9BWG4 385 aaPredicted RBP6.74□□□□□ -1.33
CMTM1-220ENST00000534143 POLR3FQ9H1D9 316 aaPredicted RBP6.74□□□□□ -1.33
CMTM1-220ENST00000534143 CHRDQ9H2X0 955 aa6.74□□□□□ -1.33
CMTM1-220ENST00000534143 ZHX3Q9H4I2 956 aa6.74□□□□□ -1.33
CMTM1-220ENST00000534143 SETD4Q9NVD3 440 aa6.74□□□□□ -1.33
CMTM1-220ENST00000534143 TBC1D7Q9P0N9 293 aa6.74□□□□□ -1.33
CMTM1-220ENST00000534143 LARSQ9P2J5 1176 aaKnown RBP6.74□□□□□ -1.33
CMTM1-220ENST00000534143 KCNG1Q9UIX4 513 aa6.74□□□□□ -1.33
CMTM1-220ENST00000534143 MAPK8IP1Q9UQF2 711 aa6.74□□□□□ -1.33
CMTM1-220ENST00000534143 KIAA0100Q14667 2235 aaKnown RBP6.74□□□□□ -1.33
CMTM1-220ENST00000534143 GRIN2DO15399 1336 aa6.74□□□□□ -1.33
CMTM1-220ENST00000534143 NRCAMQ92823 1304 aa6.74□□□□□ -1.33
CMTM1-220ENST00000534143 SIP14410 1827 aa6.73□□□□□ -1.33
CMTM1-220ENST00000534143 A0A0U1RQG5 324 aaPredicted RBP6.73□□□□□ -1.33
CMTM1-220ENST00000534143 LINC01387J3KSC0 135 aa6.73□□□□□ -1.33
CMTM1-220ENST00000534143 IKBKBO14920 756 aa6.73□□□□□ -1.33
CMTM1-220ENST00000534143 EIF3DO15371 548 aaKnown RBP eCLIP6.73□□□□□ -1.33
CMTM1-220ENST00000534143 ASAP2O43150 1006 aa6.73□□□□□ -1.33
CMTM1-220ENST00000534143 CABYRO75952 493 aa6.73□□□□□ -1.33
CMTM1-220ENST00000534143 PRPF6O94906 941 aaKnown RBP6.73□□□□□ -1.33
CMTM1-220ENST00000534143 GCNT3O95395 438 aa6.73□□□□□ -1.33
CMTM1-220ENST00000534143 ASGR1P07306 291 aa6.73□□□□□ -1.33
CMTM1-220ENST00000534143 MYBP10242 640 aa6.73□□□□□ -1.33
CMTM1-220ENST00000534143 CCL5P13501 91 aa6.73□□□□□ -1.33
CMTM1-220ENST00000534143 CDK11BP21127 795 aaKnown RBP6.73□□□□□ -1.33
CMTM1-220ENST00000534143 NMT1P30419 496 aaKnown RBP6.73□□□□□ -1.33
CMTM1-220ENST00000534143 NAMPTP43490 491 aa6.73□□□□□ -1.33
CMTM1-220ENST00000534143 ACLYP53396 1101 aa6.73□□□□□ -1.33
CMTM1-220ENST00000534143 PMS1P54277 932 aaKnown RBP6.73□□□□□ -1.33
CMTM1-220ENST00000534143 PEX3P56589 373 aa6.73□□□□□ -1.33
CMTM1-220ENST00000534143 IGBP1P78318 339 aa6.73□□□□□ -1.33
CMTM1-220ENST00000534143 GTF2BQ00403 316 aa6.73□□□□□ -1.33
CMTM1-220ENST00000534143 POU5F1BQ06416 359 aa6.73□□□□□ -1.33
CMTM1-220ENST00000534143 PDE4CQ08493 712 aa6.73□□□□□ -1.33
CMTM1-220ENST00000534143 PAK1Q13153 545 aa6.73□□□□□ -1.33
CMTM1-220ENST00000534143 ALCAMQ13740 583 aa6.73□□□□□ -1.33
CMTM1-220ENST00000534143 UVSSAQ2YD98 709 aa6.73□□□□□ -1.33
CMTM1-220ENST00000534143 SLC9C1Q4G0N8 1177 aa6.73□□□□□ -1.33
CMTM1-220ENST00000534143 ZCWPW2Q504Y3 356 aa6.73□□□□□ -1.33
CMTM1-220ENST00000534143 ZC2HC1CQ53FD0 456 aaPredicted RBP6.73□□□□□ -1.33
CMTM1-220ENST00000534143 ODR4Q5SWX8 454 aa6.73□□□□□ -1.33
CMTM1-220ENST00000534143 KLHL10Q6JEL2 608 aa6.73□□□□□ -1.33
CMTM1-220ENST00000534143 TTI2Q6NXR4 508 aa6.73□□□□□ -1.33
CMTM1-220ENST00000534143 ADAMTSL4Q6UY14 1074 aa6.73□□□□□ -1.33
CMTM1-220ENST00000534143 HAUS6Q7Z4H7 955 aa6.73□□□□□ -1.33
CMTM1-220ENST00000534143 LUZP1Q86V48 1076 aa6.73□□□□□ -1.33
CMTM1-220ENST00000534143 SESTD1Q86VW0 696 aa6.73□□□□□ -1.33
CMTM1-220ENST00000534143 FAM178BQ8IXR5 827 aa6.73□□□□□ -1.33
CMTM1-220ENST00000534143 MYOCDQ8IZQ8 938 aa6.73□□□□□ -1.33
CMTM1-220ENST00000534143 LRRC71Q8N4P6 559 aa6.73□□□□□ -1.33
CMTM1-220ENST00000534143 ARRDC4Q8NCT1 418 aa6.73□□□□□ -1.33
CMTM1-220ENST00000534143 RNF214Q8ND24 703 aa6.73□□□□□ -1.33
CMTM1-220ENST00000534143 TMEM161BQ8NDZ6 487 aa6.73□□□□□ -1.33
CMTM1-220ENST00000534143 PPP1R13LQ8WUF5 828 aa6.73□□□□□ -1.33
CMTM1-220ENST00000534143 LMBR1Q8WVP7 490 aa6.73□□□□□ -1.33
CMTM1-220ENST00000534143 PRPF31Q8WWY3 499 aaKnown RBP6.73□□□□□ -1.33
CMTM1-220ENST00000534143 NELFBQ8WX92 580 aa6.73□□□□□ -1.33
CMTM1-220ENST00000534143 P2RX5Q93086 422 aa6.73□□□□□ -1.33
CMTM1-220ENST00000534143 ARMC5Q96C12 935 aa6.73□□□□□ -1.33
CMTM1-220ENST00000534143 ZBTB10Q96DT7 871 aa6.73□□□□□ -1.33
CMTM1-220ENST00000534143 POP1Q99575 1024 aaKnown RBP6.73□□□□□ -1.33
CMTM1-220ENST00000534143 DUSP9Q99956 384 aaKnown RBP6.73□□□□□ -1.33
CMTM1-220ENST00000534143 LACRTQ9GZZ8 138 aa6.73□□□□□ -1.33
CMTM1-220ENST00000534143 NAT10Q9H0A0 1025 aaKnown RBP6.73□□□□□ -1.33
CMTM1-220ENST00000534143 MRPL18Q9H0U6 180 aaKnown RBP6.73□□□□□ -1.33
CMTM1-220ENST00000534143 HSD3B7Q9H2F3 369 aa6.73□□□□□ -1.33
CMTM1-220ENST00000534143 KCTD10Q9H3F6 313 aa6.73□□□□□ -1.33
CMTM1-220ENST00000534143 MRPL44Q9H9J2 332 aaKnown RBP6.73□□□□□ -1.33
CMTM1-220ENST00000534143 SUGCTQ9HAC7 445 aa6.73□□□□□ -1.33
CMTM1-220ENST00000534143 HDAC6Q9UBN7 1215 aa6.73□□□□□ -1.33
CMTM1-220ENST00000534143 GTF2IRD1Q9UHL9 959 aa6.73□□□□□ -1.33
CMTM1-220ENST00000534143 RWDD2AQ9UIY3 292 aa6.73□□□□□ -1.33
CMTM1-220ENST00000534143 OGDHLQ9ULD0 1010 aa6.73□□□□□ -1.33
CMTM1-220ENST00000534143 UBE4BO95155 1302 aa6.73□□□□□ -1.33
CMTM1-220ENST00000534143 ADGRA3Q8IWK6 1321 aa6.73□□□□□ -1.33
CMTM1-220ENST00000534143 SZT2Q5T011 3432 aa6.72□□□□□ -1.33
CMTM1-220ENST00000534143 SMIM35A0A1B0GVV1 85 aa6.72□□□□□ -1.33
CMTM1-220ENST00000534143 SMTNL1A8MU46 457 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms