RNA–Protein interactions for RNA: ENST00000533761.5

CCDC90B-218, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 1,587 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-218ENST00000533761 MXI1P50539 228 aa11.83□□□□□ -0.52
CCDC90B-218ENST00000533761 ZBED6P86452 979 aa11.83□□□□□ -0.52
CCDC90B-218ENST00000533761 CYP24A1Q07973 514 aa11.83□□□□□ -0.52
CCDC90B-218ENST00000533761 GPNMBQ14956 572 aa11.83□□□□□ -0.52
CCDC90B-218ENST00000533761 PLEKHG4Q58EX7 1191 aa11.83□□□□□ -0.52
CCDC90B-218ENST00000533761 KRT39Q6A163 491 aa11.83□□□□□ -0.52
CCDC90B-218ENST00000533761 SLC39A4Q6P5W5 647 aa11.83□□□□□ -0.52
CCDC90B-218ENST00000533761 NOTUMQ6P988 496 aa11.83□□□□□ -0.52
CCDC90B-218ENST00000533761 FAM228AQ86W67 206 aa11.83□□□□□ -0.52
CCDC90B-218ENST00000533761 DBF4BQ8NFT6 615 aa11.83□□□□□ -0.52
CCDC90B-218ENST00000533761 OR8K1Q8NGG5 319 aa11.83□□□□□ -0.52
CCDC90B-218ENST00000533761 SAAL1Q96ER3 474 aa11.83□□□□□ -0.52
CCDC90B-218ENST00000533761 MFSD14AQ96MC6 490 aa11.83□□□□□ -0.52
CCDC90B-218ENST00000533761 BAG1Q99933 345 aaPredicted RBP11.83□□□□□ -0.52
CCDC90B-218ENST00000533761 FTHL17Q9BXU8 183 aa11.83□□□□□ -0.52
CCDC90B-218ENST00000533761 IL23AQ9NPF7 189 aa11.83□□□□□ -0.52
CCDC90B-218ENST00000533761 CHST12Q9NRB3 414 aa11.83□□□□□ -0.52
CCDC90B-218ENST00000533761 FAM207AQ9NSI2 230 aaPredicted RBP11.83□□□□□ -0.52
CCDC90B-218ENST00000533761 GCNT4Q9P109 453 aa11.83□□□□□ -0.52
CCDC90B-218ENST00000533761 CEP72Q9P209 647 aa11.83□□□□□ -0.52
CCDC90B-218ENST00000533761 FBXL5Q9UKA1 691 aa11.83□□□□□ -0.52
CCDC90B-218ENST00000533761 CAPN11Q9UMQ6 739 aa11.83□□□□□ -0.52
CCDC90B-218ENST00000533761 TANC1Q9C0D5 1861 aa11.82□□□□□ -0.52
CCDC90B-218ENST00000533761 TISP43B9A030 160 aa11.82□□□□□ -0.52
CCDC90B-218ENST00000533761 ARHGAP6O43182 974 aa11.82□□□□□ -0.52
CCDC90B-218ENST00000533761 IL18RAPO95256 599 aa11.82□□□□□ -0.52
CCDC90B-218ENST00000533761 IPO7O95373 1038 aaKnown RBP11.82□□□□□ -0.52
CCDC90B-218ENST00000533761 GYPCP04921 128 aa11.82□□□□□ -0.52
CCDC90B-218ENST00000533761 CCDC172P0C7W6 258 aa11.82□□□□□ -0.52
CCDC90B-218ENST00000533761 SKILP12757 684 aa11.82□□□□□ -0.52
CCDC90B-218ENST00000533761 ACTN1P12814 892 aa11.82□□□□□ -0.52
CCDC90B-218ENST00000533761 ZSCAN20P17040 1043 aaPredicted RBP11.82□□□□□ -0.52
CCDC90B-218ENST00000533761 CASP14P31944 242 aa11.82□□□□□ -0.52
CCDC90B-218ENST00000533761 KRT9P35527 623 aa11.82□□□□□ -0.52
CCDC90B-218ENST00000533761 MCCD1P59942 119 aaPredicted RBP11.82□□□□□ -0.52
CCDC90B-218ENST00000533761 IKBKEQ14164 716 aa11.82□□□□□ -0.52
CCDC90B-218ENST00000533761 PSMD6Q15008 389 aa11.82□□□□□ -0.52
CCDC90B-218ENST00000533761 CBWD2Q8IUF1 395 aa11.82□□□□□ -0.52
CCDC90B-218ENST00000533761 PARD3BQ8TEW8 1205 aa11.82□□□□□ -0.52
CCDC90B-218ENST00000533761 CCDC127Q96BQ5 260 aa11.82□□□□□ -0.52
CCDC90B-218ENST00000533761 TRIM6Q9C030 488 aaPredicted RBP11.82□□□□□ -0.52
CCDC90B-218ENST00000533761 TMEM8AQ9HCN3 771 aa11.82□□□□□ -0.52
CCDC90B-218ENST00000533761 ERVK-5Q9HDB9 667 aa11.82□□□□□ -0.52
CCDC90B-218ENST00000533761 AGPAT5Q9NUQ2 364 aa11.82□□□□□ -0.52
CCDC90B-218ENST00000533761 MYO6Q9UM54 1294 aa11.82□□□□□ -0.52
CCDC90B-218ENST00000533761 SIK3Q9Y2K2 1263 aa11.82□□□□□ -0.52
CCDC90B-218ENST00000533761 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.82□□□□□ -0.52
CCDC90B-218ENST00000533761 GOLGA8IPA6NC78 632 aa11.81□□□□□ -0.52
CCDC90B-218ENST00000533761 GOLGA8JA6NMD2 632 aa11.81□□□□□ -0.52
CCDC90B-218ENST00000533761 TSPAN1O60635 241 aa11.81□□□□□ -0.52
CCDC90B-218ENST00000533761 DLATP10515 647 aaKnown RBP11.81□□□□□ -0.52
CCDC90B-218ENST00000533761 HARSP12081 509 aaKnown RBP11.81□□□□□ -0.52
CCDC90B-218ENST00000533761 TNNI1P19237 187 aa11.81□□□□□ -0.52
CCDC90B-218ENST00000533761 FGFR4P22455 802 aa11.81□□□□□ -0.52
CCDC90B-218ENST00000533761 PROZP22891 400 aa11.81□□□□□ -0.52
CCDC90B-218ENST00000533761 KCNJ6P48051 423 aa11.81□□□□□ -0.52
CCDC90B-218ENST00000533761 CNKSR3Q6P9H4 555 aa11.81□□□□□ -0.52
CCDC90B-218ENST00000533761 SLC27A1Q6PCB7 646 aa11.81□□□□□ -0.52
CCDC90B-218ENST00000533761 TMTC1Q8IUR5 882 aa11.81□□□□□ -0.52
CCDC90B-218ENST00000533761 HACE1Q8IYU2 909 aa11.81□□□□□ -0.52
CCDC90B-218ENST00000533761 CACTINQ8WUQ7 758 aaKnown RBP11.81□□□□□ -0.52
CCDC90B-218ENST00000533761 CPLX3Q8WVH0 158 aa11.81□□□□□ -0.52
CCDC90B-218ENST00000533761 PKNOX2Q96KN3 472 aa11.81□□□□□ -0.52
CCDC90B-218ENST00000533761 SPAG5Q96R06 1193 aa11.81□□□□□ -0.52
CCDC90B-218ENST00000533761 LSM14BQ9BX40 385 aaKnown RBP11.81□□□□□ -0.52
CCDC90B-218ENST00000533761 OSBPL7Q9BZF2 842 aa11.81□□□□□ -0.52
CCDC90B-218ENST00000533761 IMPG2Q9BZV3 1241 aa11.81□□□□□ -0.52
CCDC90B-218ENST00000533761 IKZF4Q9H2S9 585 aa11.81□□□□□ -0.52
CCDC90B-218ENST00000533761 ABHD10Q9NUJ1 306 aa11.81□□□□□ -0.52
CCDC90B-218ENST00000533761 PIN4Q9Y237 131 aaKnown RBP11.81□□□□□ -0.52
CCDC90B-218ENST00000533761 CEP290O15078 2479 aa11.81□□□□□ -0.52
CCDC90B-218ENST00000533761 A0A1B0GUA9 196 aa11.8□□□□□ -0.52
CCDC90B-218ENST00000533761 ABHD14A-ACY1A0A1B0GW23 586 aa11.8□□□□□ -0.52
CCDC90B-218ENST00000533761 TTC26A0AVF1 554 aa11.8□□□□□ -0.52
CCDC90B-218ENST00000533761 ESPNB1AK53 854 aa11.8□□□□□ -0.52
CCDC90B-218ENST00000533761 EFCAB14O75071 495 aa11.8□□□□□ -0.52
CCDC90B-218ENST00000533761 ZC3H11AO75152 810 aaKnown RBP eCLIP11.8□□□□□ -0.52
CCDC90B-218ENST00000533761 FGBP02675 491 aa11.8□□□□□ -0.52
CCDC90B-218ENST00000533761 CLTAP09496 248 aa11.8□□□□□ -0.52
CCDC90B-218ENST00000533761 TRIM49P0CI25 452 aa11.8□□□□□ -0.52
CCDC90B-218ENST00000533761 TRIM49CP0CI26 452 aa11.8□□□□□ -0.52
CCDC90B-218ENST00000533761 ARF4P18085 180 aaPredicted RBP11.8□□□□□ -0.52
CCDC90B-218ENST00000533761 HOXA11P31270 313 aaPredicted RBP11.8□□□□□ -0.52
CCDC90B-218ENST00000533761 ADKP55263 362 aaKnown RBP11.8□□□□□ -0.52
CCDC90B-218ENST00000533761 AMHR2Q16671 573 aa11.8□□□□□ -0.52
CCDC90B-218ENST00000533761 PSRC1Q6PGN9 363 aaPredicted RBP11.8□□□□□ -0.52
CCDC90B-218ENST00000533761 CYP26C1Q6V0L0 522 aa11.8□□□□□ -0.52
CCDC90B-218ENST00000533761 ZBTB33Q86T24 672 aa11.8□□□□□ -0.52
CCDC90B-218ENST00000533761 WDR49Q8IV35 697 aa11.8□□□□□ -0.52
CCDC90B-218ENST00000533761 BRSK2Q8IWQ3 736 aa11.8□□□□□ -0.52
CCDC90B-218ENST00000533761 CD302Q8IX05 232 aa11.8□□□□□ -0.52
CCDC90B-218ENST00000533761 SCUBE3Q8IX30 993 aa11.8□□□□□ -0.52
CCDC90B-218ENST00000533761 TC2NQ8N9U0 490 aa11.8□□□□□ -0.52
CCDC90B-218ENST00000533761 SYN2Q92777 582 aaPredicted RBP11.8□□□□□ -0.52
CCDC90B-218ENST00000533761 DNAJC7Q99615 494 aa11.8□□□□□ -0.52
CCDC90B-218ENST00000533761 SPSB2Q99619 263 aa11.8□□□□□ -0.52
CCDC90B-218ENST00000533761 CCDC94Q9BW85 323 aaPredicted RBP11.8□□□□□ -0.52
CCDC90B-218ENST00000533761 RPF1Q9H9Y2 349 aaKnown RBP11.8□□□□□ -0.52
CCDC90B-218ENST00000533761 PTPRHQ9HD43 1115 aa11.8□□□□□ -0.52
CCDC90B-218ENST00000533761 TOPORSQ9NS56 1045 aaPredicted RBP11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms