RNA–Protein interactions for RNA: ENST00000533704.1

CAPN1-225, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-225ENST00000533704 TFIP11Q9UBB9 837 aaKnown RBP11.39□□□□□ -0.59
CAPN1-225ENST00000533704 STK17AQ9UEE5 414 aa11.39□□□□□ -0.59
CAPN1-225ENST00000533704 TUBGCP4Q9UGJ1 667 aa11.39□□□□□ -0.59
CAPN1-225ENST00000533704 FBXW11Q9UKB1 542 aa11.39□□□□□ -0.59
CAPN1-225ENST00000533704 CDY1Q9Y6F8 540 aa11.39□□□□□ -0.59
CAPN1-225ENST00000533704 CCL16O15467 120 aa11.38□□□□□ -0.59
CAPN1-225ENST00000533704 C8AP07357 584 aa11.38□□□□□ -0.59
CAPN1-225ENST00000533704 CLTAP09496 248 aa11.38□□□□□ -0.59
CAPN1-225ENST00000533704 RPL9P32969 192 aaKnown RBP11.38□□□□□ -0.59
CAPN1-225ENST00000533704 MCM4P33991 863 aa11.38□□□□□ -0.59
CAPN1-225ENST00000533704 PLA2G5P39877 138 aa11.38□□□□□ -0.59
CAPN1-225ENST00000533704 STAT6P42226 847 aa11.38□□□□□ -0.59
CAPN1-225ENST00000533704 ZNF131P52739 623 aa11.38□□□□□ -0.59
CAPN1-225ENST00000533704 PPP2R3AQ06190 1150 aa11.38□□□□□ -0.59
CAPN1-225ENST00000533704 MAPK8IP2Q13387 824 aaPredicted RBP11.38□□□□□ -0.59
CAPN1-225ENST00000533704 SLC39A14Q15043 492 aa11.38□□□□□ -0.59
CAPN1-225ENST00000533704 ZC2HC1CQ53FD0 456 aaPredicted RBP11.38□□□□□ -0.59
CAPN1-225ENST00000533704 XKR4Q5GH76 650 aa11.38□□□□□ -0.59
CAPN1-225ENST00000533704 CCDC73Q6ZRK6 1079 aa11.38□□□□□ -0.59
CAPN1-225ENST00000533704 ANKS3Q6ZW76 656 aa11.38□□□□□ -0.59
CAPN1-225ENST00000533704 SV2BQ7L1I2 683 aa11.38□□□□□ -0.59
CAPN1-225ENST00000533704 SFR1Q86XK3 245 aa11.38□□□□□ -0.59
CAPN1-225ENST00000533704 PDILTQ8N807 584 aa11.38□□□□□ -0.59
CAPN1-225ENST00000533704 SLC7A14Q8TBB6 771 aa11.38□□□□□ -0.59
CAPN1-225ENST00000533704 KIF12Q96FN5 646 aa11.38□□□□□ -0.59
CAPN1-225ENST00000533704 PRKD2Q9BZL6 878 aa11.38□□□□□ -0.59
CAPN1-225ENST00000533704 RPF1Q9H9Y2 349 aaKnown RBP11.38□□□□□ -0.59
CAPN1-225ENST00000533704 ZDHHC7Q9NXF8 308 aa11.38□□□□□ -0.59
CAPN1-225ENST00000533704 TBC1D7Q9P0N9 293 aa11.38□□□□□ -0.59
CAPN1-225ENST00000533704 MTRRQ9UBK8 725 aa11.38□□□□□ -0.59
CAPN1-225ENST00000533704 SCN1AP35498 2009 aa11.38□□□□□ -0.59
CAPN1-225ENST00000533704 NOTCH4Q99466 2003 aa11.37□□□□□ -0.59
CAPN1-225ENST00000533704 MYMKA6NI61 221 aa11.37□□□□□ -0.59
CAPN1-225ENST00000533704 LACTBL1A8MY62 500 aa11.37□□□□□ -0.59
CAPN1-225ENST00000533704 TISP43B9A030 160 aa11.37□□□□□ -0.59
CAPN1-225ENST00000533704 ANKRD63C9JTQ0 380 aa11.37□□□□□ -0.59
CAPN1-225ENST00000533704 OGTO15294 1046 aa11.37□□□□□ -0.59
CAPN1-225ENST00000533704 PDGFBP01127 241 aaPredicted RBP11.37□□□□□ -0.59
CAPN1-225ENST00000533704 IDEP14735 1019 aa11.37□□□□□ -0.59
CAPN1-225ENST00000533704 GUCY2FP51841 1108 aa11.37□□□□□ -0.59
CAPN1-225ENST00000533704 NTHL1P78549 312 aa11.37□□□□□ -0.59
CAPN1-225ENST00000533704 VARS2Q5ST30 1063 aaKnown RBP11.37□□□□□ -0.59
CAPN1-225ENST00000533704 AXDND1Q5T1B0 1012 aaPredicted RBP11.37□□□□□ -0.59
CAPN1-225ENST00000533704 RSPO2Q6UXX9 243 aaPredicted RBP11.37□□□□□ -0.59
CAPN1-225ENST00000533704 CYP26C1Q6V0L0 522 aa11.37□□□□□ -0.59
CAPN1-225ENST00000533704 GRASPQ7Z6J2 395 aaPredicted RBP11.37□□□□□ -0.59
CAPN1-225ENST00000533704 UBALD2Q8IYN6 164 aa11.37□□□□□ -0.59
CAPN1-225ENST00000533704 FBXL6Q8N531 539 aa11.37□□□□□ -0.59
CAPN1-225ENST00000533704 ST13P5Q8NFI4 369 aaPredicted RBP11.37□□□□□ -0.59
CAPN1-225ENST00000533704 DDX12PQ92771 950 aa11.37□□□□□ -0.59
CAPN1-225ENST00000533704 SNX21Q969T3 373 aa11.37□□□□□ -0.59
CAPN1-225ENST00000533704 ZNF396Q96N95 335 aaPredicted RBP11.37□□□□□ -0.59
CAPN1-225ENST00000533704 MYADMQ96S97 322 aa11.37□□□□□ -0.59
CAPN1-225ENST00000533704 MRPL44Q9H9J2 332 aaKnown RBP11.37□□□□□ -0.59
CAPN1-225ENST00000533704 TTC26A0AVF1 554 aa11.36□□□□□ -0.59
CAPN1-225ENST00000533704 N4BP1O75113 896 aaKnown RBP11.36□□□□□ -0.59
CAPN1-225ENST00000533704 XYLBO75191 536 aa11.36□□□□□ -0.59
CAPN1-225ENST00000533704 C1RP00736 705 aa11.36□□□□□ -0.59
CAPN1-225ENST00000533704 PIGRP01833 764 aa11.36□□□□□ -0.59
CAPN1-225ENST00000533704 SCP2P22307 547 aa11.36□□□□□ -0.59
CAPN1-225ENST00000533704 FSHRP23945 695 aa11.36□□□□□ -0.59
CAPN1-225ENST00000533704 ELF1P32519 619 aa11.36□□□□□ -0.59
CAPN1-225ENST00000533704 NASPP49321 788 aaPredicted RBP11.36□□□□□ -0.59
CAPN1-225ENST00000533704 ACOT2P49753 483 aa11.36□□□□□ -0.59
CAPN1-225ENST00000533704 GTF2BQ00403 316 aa11.36□□□□□ -0.59
CAPN1-225ENST00000533704 RAB33AQ14088 237 aa11.36□□□□□ -0.59
CAPN1-225ENST00000533704 ENOX2Q16206 610 aaKnown RBP11.36□□□□□ -0.59
CAPN1-225ENST00000533704 KYAT1Q16773 422 aa11.36□□□□□ -0.59
CAPN1-225ENST00000533704 ADALQ6DHV7 355 aa11.36□□□□□ -0.59
CAPN1-225ENST00000533704 SLC39A4Q6P5W5 647 aa11.36□□□□□ -0.59
CAPN1-225ENST00000533704 BMP8AQ7Z5Y6 402 aa11.36□□□□□ -0.59
CAPN1-225ENST00000533704 MAP4K3Q8IVH8 894 aa11.36□□□□□ -0.59
CAPN1-225ENST00000533704 RSAD2Q8WXG1 361 aa11.36□□□□□ -0.59
CAPN1-225ENST00000533704 ASIC4Q96FT7 647 aa11.36□□□□□ -0.59
CAPN1-225ENST00000533704 RHOBTB2Q9BYZ6 727 aa11.36□□□□□ -0.59
CAPN1-225ENST00000533704 IKZF4Q9H2S9 585 aa11.36□□□□□ -0.59
CAPN1-225ENST00000533704 PLEKHA5Q9HAU0 1116 aa11.36□□□□□ -0.59
CAPN1-225ENST00000533704 KCNK12Q9HB15 430 aa11.36□□□□□ -0.59
CAPN1-225ENST00000533704 FBXL21Q9UKT6 434 aa11.36□□□□□ -0.59
CAPN1-225ENST00000533704 UBQLN1Q9UMX0 589 aaKnown RBP11.36□□□□□ -0.59
CAPN1-225ENST00000533704 BACE2Q9Y5Z0 518 aa11.36□□□□□ -0.59
CAPN1-225ENST00000533704 A0A087X0B3 334 aa11.35□□□□□ -0.59
CAPN1-225ENST00000533704 A0A0B4J269 797 aa11.35□□□□□ -0.59
CAPN1-225ENST00000533704 H7C4K7 107 aa11.35□□□□□ -0.59
CAPN1-225ENST00000533704 PRRG1O14668 218 aa11.35□□□□□ -0.59
CAPN1-225ENST00000533704 SYN3O14994 580 aa11.35□□□□□ -0.59
CAPN1-225ENST00000533704 SPTLC2O15270 562 aa11.35□□□□□ -0.59
CAPN1-225ENST00000533704 XPOTO43592 962 aaKnown RBP11.35□□□□□ -0.59
CAPN1-225ENST00000533704 GCNT3O95395 438 aa11.35□□□□□ -0.59
CAPN1-225ENST00000533704 HNRNPA1P09651 372 aaKnown RBP eCLIP11.35□□□□□ -0.59
CAPN1-225ENST00000533704 GAP43P17677 238 aa11.35□□□□□ -0.59
CAPN1-225ENST00000533704 ABCD1P33897 745 aa11.35□□□□□ -0.59
CAPN1-225ENST00000533704 VCPP55072 806 aaKnown RBP11.35□□□□□ -0.59
CAPN1-225ENST00000533704 ROR1Q01973 937 aa11.35□□□□□ -0.59
CAPN1-225ENST00000533704 TDGQ13569 410 aa11.35□□□□□ -0.59
CAPN1-225ENST00000533704 CTXN3Q4LDR2 81 aa11.35□□□□□ -0.59
CAPN1-225ENST00000533704 ZNF280DQ6N043 979 aa11.35□□□□□ -0.59
CAPN1-225ENST00000533704 DSTYKQ6XUX3 929 aa11.35□□□□□ -0.59
CAPN1-225ENST00000533704 LINC00301Q8NCQ3 95 aa11.35□□□□□ -0.59
CAPN1-225ENST00000533704 APPL2Q8NEU8 664 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms