RNA–Protein interactions for RNA: ENST00000533123.5

SMPD1-208, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,211 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-208ENST00000533123 RNF39Q9H2S5 420 aa19.95■□□□□ 0.78
SMPD1-208ENST00000533123 FAM105AQ9NUU6 356 aa19.95■□□□□ 0.78
SMPD1-208ENST00000533123 PCDHB2Q9Y5E7 798 aa19.95■□□□□ 0.78
SMPD1-208ENST00000533123 SCN5AQ14524 2016 aa19.95■□□□□ 0.78
SMPD1-208ENST00000533123 ZNF263O14978 683 aa19.95■□□□□ 0.78
SMPD1-208ENST00000533123 IBSPP21815 317 aaPredicted RBP19.95■□□□□ 0.78
SMPD1-208ENST00000533123 DSC3Q14574 896 aa19.95■□□□□ 0.78
SMPD1-208ENST00000533123 ZNF516Q92618 1163 aa19.95■□□□□ 0.78
SMPD1-208ENST00000533123 LACTBL1A8MY62 500 aa19.94■□□□□ 0.78
SMPD1-208ENST00000533123 EIF3CLB5ME19 914 aaKnown RBP19.94■□□□□ 0.78
SMPD1-208ENST00000533123 CLDN10P78369 228 aa19.94■□□□□ 0.78
SMPD1-208ENST00000533123 ARHGAP29Q52LW3 1261 aa19.94■□□□□ 0.78
SMPD1-208ENST00000533123 DBF4BQ8NFT6 615 aa19.94■□□□□ 0.78
SMPD1-208ENST00000533123 EIF3CQ99613 913 aaKnown RBP19.94■□□□□ 0.78
SMPD1-208ENST00000533123 TMEM117Q9H0C3 514 aa19.94■□□□□ 0.78
SMPD1-208ENST00000533123 CXCL16Q9H2A7 254 aa19.94■□□□□ 0.78
SMPD1-208ENST00000533123 CITO14578 2027 aa19.94■□□□□ 0.78
SMPD1-208ENST00000533123 TRIM43BA6NCK2 446 aa19.94■□□□□ 0.78
SMPD1-208ENST00000533123 ITGB8P26012 769 aa19.94■□□□□ 0.78
SMPD1-208ENST00000533123 KIF11P52732 1056 aa19.94■□□□□ 0.78
SMPD1-208ENST00000533123 IQCEQ6IPM2 695 aa19.94■□□□□ 0.78
SMPD1-208ENST00000533123 RTN4RL1Q86UN2 441 aaPredicted RBP19.94■□□□□ 0.78
SMPD1-208ENST00000533123 SYN2Q92777 582 aaPredicted RBP19.94■□□□□ 0.78
SMPD1-208ENST00000533123 TRIM43Q96BQ3 446 aaPredicted RBP19.94■□□□□ 0.78
SMPD1-208ENST00000533123 INTS2Q9H0H0 1204 aaKnown RBP19.94■□□□□ 0.78
SMPD1-208ENST00000533123 TRIP11Q15643 1979 aa19.93■□□□□ 0.78
SMPD1-208ENST00000533123 RECQL4O94761 1208 aa19.93■□□□□ 0.78
SMPD1-208ENST00000533123 TUBB4AP04350 444 aa19.93■□□□□ 0.78
SMPD1-208ENST00000533123 PLEKHG4Q58EX7 1191 aa19.93■□□□□ 0.78
SMPD1-208ENST00000533123 SV2AQ7L0J3 742 aa19.93■□□□□ 0.78
SMPD1-208ENST00000533123 DEFB128Q7Z7B8 93 aa19.93■□□□□ 0.78
SMPD1-208ENST00000533123 OR5B17Q8NGF7 314 aa19.93■□□□□ 0.78
SMPD1-208ENST00000533123 NUCKS1Q9H1E3 243 aaKnown RBP19.93■□□□□ 0.78
SMPD1-208ENST00000533123 DEF6Q9H4E7 631 aa19.93■□□□□ 0.78
SMPD1-208ENST00000533123 RNF19AQ9NV58 838 aa19.93■□□□□ 0.78
SMPD1-208ENST00000533123 KLK14Q9P0G3 267 aa19.93■□□□□ 0.78
SMPD1-208ENST00000533123 PARP2Q9UGN5 583 aa19.93■□□□□ 0.78
SMPD1-208ENST00000533123 ANK1P16157 1881 aa19.93■□□□□ 0.78
SMPD1-208ENST00000533123 RCCD1A6NED2 376 aa19.92■□□□□ 0.78
SMPD1-208ENST00000533123 MEIS3P2A8K0S8 358 aa19.92■□□□□ 0.78
SMPD1-208ENST00000533123 LRRN2O75325 713 aa19.92■□□□□ 0.78
SMPD1-208ENST00000533123 MXI1P50539 228 aa19.92■□□□□ 0.78
SMPD1-208ENST00000533123 YARSP54577 528 aaKnown RBP19.92■□□□□ 0.78
SMPD1-208ENST00000533123 ENPEPQ07075 957 aa19.92■□□□□ 0.78
SMPD1-208ENST00000533123 TDRD12Q587J7 1177 aaKnown RBP19.92■□□□□ 0.78
SMPD1-208ENST00000533123 EFCAB13Q8IY85 973 aa19.92■□□□□ 0.78
SMPD1-208ENST00000533123 SPAG5Q96R06 1193 aa19.92■□□□□ 0.78
SMPD1-208ENST00000533123 CGRRF1Q99675 332 aa19.92■□□□□ 0.78
SMPD1-208ENST00000533123 AKR1B10O60218 316 aa19.92■□□□□ 0.78
SMPD1-208ENST00000533123 IL18RAPO95256 599 aa19.92■□□□□ 0.78
SMPD1-208ENST00000533123 PNMA6AP0CW24 399 aaPredicted RBP19.92■□□□□ 0.78
SMPD1-208ENST00000533123 SURF1Q15526 300 aa19.92■□□□□ 0.78
SMPD1-208ENST00000533123 KRT39Q6A163 491 aa19.92■□□□□ 0.78
SMPD1-208ENST00000533123 LPPQ93052 612 aa19.92■□□□□ 0.78
SMPD1-208ENST00000533123 TMEM8AQ9HCN3 771 aa19.92■□□□□ 0.78
SMPD1-208ENST00000533123 AIPL1Q9NZN9 384 aa19.92■□□□□ 0.78
SMPD1-208ENST00000533123 TANC1Q9C0D5 1861 aa19.92■□□□□ 0.78
SMPD1-208ENST00000533123 A0A0U1RQF3 1178 aa19.91■□□□□ 0.78
SMPD1-208ENST00000533123 SERPING1P05155 500 aa19.91■□□□□ 0.78
SMPD1-208ENST00000533123 NFICP08651 508 aa19.91■□□□□ 0.78
SMPD1-208ENST00000533123 KRT83P78385 493 aa19.91■□□□□ 0.78
SMPD1-208ENST00000533123 TFAMQ00059 246 aaKnown RBP19.91■□□□□ 0.78
SMPD1-208ENST00000533123 POU5F1Q01860 360 aaKnown RBP19.91■□□□□ 0.78
SMPD1-208ENST00000533123 GFPT1Q06210 699 aaPredicted RBP19.91■□□□□ 0.78
SMPD1-208ENST00000533123 ASIC2Q16515 512 aa19.91■□□□□ 0.78
SMPD1-208ENST00000533123 ASTE1Q2TB18 679 aaPredicted RBP19.91■□□□□ 0.78
SMPD1-208ENST00000533123 JADE1Q6IE81 842 aa19.91■□□□□ 0.78
SMPD1-208ENST00000533123 KIAA1328Q86T90 577 aa19.91■□□□□ 0.78
SMPD1-208ENST00000533123 WDR49Q8IV35 697 aa19.91■□□□□ 0.78
SMPD1-208ENST00000533123 LMO3Q8TAP4 145 aa19.91■□□□□ 0.78
SMPD1-208ENST00000533123 LINC01599Q8WXQ3 324 aa19.91■□□□□ 0.78
SMPD1-208ENST00000533123 TRAIPQ9BWF2 469 aa19.91■□□□□ 0.78
SMPD1-208ENST00000533123 MTMR12Q9C0I1 747 aa19.91■□□□□ 0.78
SMPD1-208ENST00000533123 LACRTQ9GZZ8 138 aa19.91■□□□□ 0.78
SMPD1-208ENST00000533123 ASB7Q9H672 318 aa19.91■□□□□ 0.78
SMPD1-208ENST00000533123 FBXL5Q9UKA1 691 aa19.91■□□□□ 0.78
SMPD1-208ENST00000533123 IPO7O95373 1038 aaKnown RBP19.91■□□□□ 0.78
SMPD1-208ENST00000533123 TIMP1P01033 207 aa19.91■□□□□ 0.78
SMPD1-208ENST00000533123 GTF2H1P32780 548 aa19.91■□□□□ 0.78
SMPD1-208ENST00000533123 JAM2P57087 298 aa19.91■□□□□ 0.78
SMPD1-208ENST00000533123 TCTN1Q2MV58 587 aa19.91■□□□□ 0.78
SMPD1-208ENST00000533123 RNF169Q8NCN4 708 aa19.91■□□□□ 0.78
SMPD1-208ENST00000533123 SNX27Q96L92 541 aa19.91■□□□□ 0.78
SMPD1-208ENST00000533123 RGS18Q9NS28 235 aa19.91■□□□□ 0.78
SMPD1-208ENST00000533123 KIAA0355O15063 1070 aa19.9■□□□□ 0.78
SMPD1-208ENST00000533123 KIF5CO60282 957 aa19.9■□□□□ 0.78
SMPD1-208ENST00000533123 C4BPAP04003 597 aaKnown RBP19.9■□□□□ 0.78
SMPD1-208ENST00000533123 RAG1P15918 1043 aa19.9■□□□□ 0.78
SMPD1-208ENST00000533123 MAPK8IP2Q13387 824 aaPredicted RBP19.9■□□□□ 0.78
SMPD1-208ENST00000533123 BIRC3Q13489 604 aa19.9■□□□□ 0.78
SMPD1-208ENST00000533123 ZNF569Q5MCW4 686 aa19.9■□□□□ 0.78
SMPD1-208ENST00000533123 TDRD10Q5VZ19 366 aaKnown RBP19.9■□□□□ 0.78
SMPD1-208ENST00000533123 SCARA3Q6AZY7 606 aa19.9■□□□□ 0.78
SMPD1-208ENST00000533123 C15orf39Q6ZRI6 1047 aa19.9■□□□□ 0.78
SMPD1-208ENST00000533123 TMEM130Q8N3G9 435 aa19.9■□□□□ 0.78
SMPD1-208ENST00000533123 TAS1R2Q8TE23 839 aa19.9■□□□□ 0.78
SMPD1-208ENST00000533123 SEPT8Q92599 483 aa19.9■□□□□ 0.78
SMPD1-208ENST00000533123 ABHD8Q96I13 439 aa19.9■□□□□ 0.78
SMPD1-208ENST00000533123 FTHL17Q9BXU8 183 aa19.9■□□□□ 0.78
SMPD1-208ENST00000533123 GUCA1BQ9UMX6 200 aa19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms