RNA–Protein interactions for RNA: ENST00000531558.1

PICALM-215, Transcript of phosphatidylinositol binding clathrin assembly protein, human

TSL 5

Gene PICALM, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PICALM-215	ENST00000531558	PDCD11	Q14690	1871 aa	Known RBP	28.04	■■■□□ 2.08
PICALM-215	ENST00000531558		H3BQ06	376 aa	Predicted RBP	28.03	■■■□□ 2.08
PICALM-215	ENST00000531558	XPOT	O43592	962 aa	Known RBP	28.03	■■■□□ 2.08
PICALM-215	ENST00000531558	CLASP2	O75122	1294 aa	Known RBP	28.03	■■■□□ 2.08
PICALM-215	ENST00000531558	GADD45B	O75293	160 aa	Predicted RBP	28.03	■■■□□ 2.08
PICALM-215	ENST00000531558	SNRPF	P62306	86 aa	Known RBP	28.03	■■■□□ 2.08
PICALM-215	ENST00000531558	RBM10	P98175	930 aa	Known RBP	28.03	■■■□□ 2.08
PICALM-215	ENST00000531558	KCNC3	Q14003	757 aa		28.03	■■■□□ 2.08
PICALM-215	ENST00000531558	JADE1	Q6IE81	842 aa		28.03	■■■□□ 2.08
PICALM-215	ENST00000531558	BRSK2	Q8IWQ3	736 aa		28.03	■■■□□ 2.08
PICALM-215	ENST00000531558	GPR65	Q8IYL9	337 aa		28.03	■■■□□ 2.08
PICALM-215	ENST00000531558	EMILIN2	Q9BXX0	1053 aa		28.03	■■■□□ 2.08
PICALM-215	ENST00000531558	AGPAT3	Q9NRZ7	376 aa		28.03	■■■□□ 2.08
PICALM-215	ENST00000531558	DERA	Q9Y315	318 aa		28.03	■■■□□ 2.08
PICALM-215	ENST00000531558	GOLGA8IP	A6NC78	632 aa		28.02	■■■□□ 2.08
PICALM-215	ENST00000531558	GOLGA8J	A6NMD2	632 aa		28.02	■■■□□ 2.08
PICALM-215	ENST00000531558	RHOBTB3	O94955	611 aa		28.02	■■■□□ 2.08
PICALM-215	ENST00000531558	IL18RAP	O95256	599 aa		28.02	■■■□□ 2.08
PICALM-215	ENST00000531558	NFIC	P08651	508 aa		28.02	■■■□□ 2.08
PICALM-215	ENST00000531558	TMEM132D	Q14C87	1099 aa		28.02	■■■□□ 2.08
PICALM-215	ENST00000531558	KNOP1	Q1ED39	458 aa	Known RBP	28.02	■■■□□ 2.08
PICALM-215	ENST00000531558	TJAP1	Q5JTD0	557 aa		28.02	■■■□□ 2.08
PICALM-215	ENST00000531558	FAM171A1	Q5VUB5	890 aa		28.02	■■■□□ 2.08
PICALM-215	ENST00000531558	HS2ST1	Q7LGA3	356 aa		28.02	■■■□□ 2.08
PICALM-215	ENST00000531558	GPD1L	Q8N335	351 aa		28.02	■■■□□ 2.08
PICALM-215	ENST00000531558	TIGD1	Q96MW7	591 aa		28.02	■■■□□ 2.08
PICALM-215	ENST00000531558	CLEC1B	Q9P126	229 aa		28.02	■■■□□ 2.08
PICALM-215	ENST00000531558	C2CD2	Q9Y426	696 aa		28.02	■■■□□ 2.08
PICALM-215	ENST00000531558	CNP	P09543	421 aa	Known RBP	28.01	■■■□□ 2.07
PICALM-215	ENST00000531558	LRPAP1	P30533	357 aa		28.01	■■■□□ 2.07
PICALM-215	ENST00000531558	KCNQ1	P51787	676 aa		28.01	■■■□□ 2.07
PICALM-215	ENST00000531558	PNOC	Q13519	176 aa		28.01	■■■□□ 2.07
PICALM-215	ENST00000531558	KCNB1	Q14721	858 aa		28.01	■■■□□ 2.07
PICALM-215	ENST00000531558	RTP2	Q5QGT7	225 aa		28.01	■■■□□ 2.07
PICALM-215	ENST00000531558	LLGL2	Q6P1M3	1020 aa		28.01	■■■□□ 2.07
PICALM-215	ENST00000531558	TMEM184A	Q6ZMB5	413 aa		28.01	■■■□□ 2.07
PICALM-215	ENST00000531558	TMEM130	Q8N3G9	435 aa		28.01	■■■□□ 2.07
PICALM-215	ENST00000531558	RIN2	Q8WYP3	895 aa	Predicted RBP	28.01	■■■□□ 2.07
PICALM-215	ENST00000531558	IPO9	Q96P70	1041 aa	Known RBP	28.01	■■■□□ 2.07
PICALM-215	ENST00000531558	KLHL5	Q96PQ7	755 aa		28.01	■■■□□ 2.07
PICALM-215	ENST00000531558	TTPAL	Q9BTX7	342 aa		28.01	■■■□□ 2.07
PICALM-215	ENST00000531558	RXFP1	Q9HBX9	757 aa		28.01	■■■□□ 2.07
PICALM-215	ENST00000531558	TSHZ2	Q9NRE2	1034 aa		28.01	■■■□□ 2.07
PICALM-215	ENST00000531558	RBAK	Q9NYW8	714 aa	Predicted RBP	28.01	■■■□□ 2.07
PICALM-215	ENST00000531558	HSPBP1	Q9NZL4	362 aa		28.01	■■■□□ 2.07
PICALM-215	ENST00000531558	BARX2	Q9UMQ3	279 aa	Predicted RBP	28.01	■■■□□ 2.07
PICALM-215	ENST00000531558	HCFC2	Q9Y5Z7	792 aa		28.01	■■■□□ 2.07
PICALM-215	ENST00000531558	TRAPPC3	O43617	180 aa		28	■■■□□ 2.07
PICALM-215	ENST00000531558	SRGAP2B	P0DMP2	458 aa		28	■■■□□ 2.07
PICALM-215	ENST00000531558	GUCY2F	P51841	1108 aa		28	■■■□□ 2.07
PICALM-215	ENST00000531558	SPATA1	Q5VX52	437 aa		28	■■■□□ 2.07
PICALM-215	ENST00000531558	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	28	■■■□□ 2.07
PICALM-215	ENST00000531558	BEST2	Q8NFU1	509 aa		28	■■■□□ 2.07
PICALM-215	ENST00000531558	NOC3L	Q8WTT2	800 aa	Known RBP	28	■■■□□ 2.07
PICALM-215	ENST00000531558	MSLNL	Q96KJ4	702 aa		28	■■■□□ 2.07
PICALM-215	ENST00000531558	APOBEC3C	Q9NRW3	190 aa	Known RBP eCLIP	28	■■■□□ 2.07
PICALM-215	ENST00000531558	CGN	Q9P2M7	1197 aa	Known RBP	28	■■■□□ 2.07
PICALM-215	ENST00000531558	VCAN	P13611	3396 aa		28	■■■□□ 2.07
PICALM-215	ENST00000531558	BRCC3	P46736	316 aa		27.99	■■■□□ 2.07
PICALM-215	ENST00000531558	WNT7B	P56706	349 aa		27.99	■■■□□ 2.07
PICALM-215	ENST00000531558	PPFIBP1	Q86W92	1011 aa		27.99	■■■□□ 2.07
PICALM-215	ENST00000531558	GADD45GIP1	Q8TAE8	222 aa	Predicted RBP	27.99	■■■□□ 2.07
PICALM-215	ENST00000531558	GOLGA5	Q8TBA6	731 aa		27.99	■■■□□ 2.07
PICALM-215	ENST00000531558	NUB1	Q9Y5A7	615 aa		27.99	■■■□□ 2.07
PICALM-215	ENST00000531558		I3L4J1	428 aa		27.98	■■■□□ 2.07
PICALM-215	ENST00000531558	CLIC2	O15247	247 aa		27.98	■■■□□ 2.07
PICALM-215	ENST00000531558	TEX28	O15482	410 aa		27.98	■■■□□ 2.07
PICALM-215	ENST00000531558	KIN	O60870	393 aa	Known RBP	27.98	■■■□□ 2.07
PICALM-215	ENST00000531558	ADH1A	P07327	375 aa		27.98	■■■□□ 2.07
PICALM-215	ENST00000531558	FGFR3	P22607	806 aa		27.98	■■■□□ 2.07
PICALM-215	ENST00000531558	CREM	Q03060	361 aa		27.98	■■■□□ 2.07
PICALM-215	ENST00000531558	CLUL1	Q15846	466 aa		27.98	■■■□□ 2.07
PICALM-215	ENST00000531558	CEP57	Q86XR8	500 aa		27.98	■■■□□ 2.07
PICALM-215	ENST00000531558	C12orf56	Q8IXR9	622 aa		27.98	■■■□□ 2.07
PICALM-215	ENST00000531558	EFCAB13	Q8IY85	973 aa		27.98	■■■□□ 2.07
PICALM-215	ENST00000531558	SLC22A17	Q8WUG5	538 aa		27.98	■■■□□ 2.07
PICALM-215	ENST00000531558	PIK3R5	Q8WYR1	880 aa		27.98	■■■□□ 2.07
PICALM-215	ENST00000531558	CASP10	Q92851	521 aa		27.98	■■■□□ 2.07
PICALM-215	ENST00000531558	FBXL18	Q96ME1	805 aa		27.98	■■■□□ 2.07
PICALM-215	ENST00000531558	KIAA1586	Q9HCI6	787 aa		27.98	■■■□□ 2.07
PICALM-215	ENST00000531558	CD207	Q9UJ71	328 aa		27.98	■■■□□ 2.07
PICALM-215	ENST00000531558	HOOK1	Q9UJC3	728 aa	Known RBP	27.98	■■■□□ 2.07
PICALM-215	ENST00000531558	KLRC2	P26717	231 aa		27.97	■■■□□ 2.07
PICALM-215	ENST00000531558	PUS10	Q3MIT2	529 aa	Known RBP	27.97	■■■□□ 2.07
PICALM-215	ENST00000531558	PRSS55	Q6UWB4	352 aa	Predicted RBP	27.97	■■■□□ 2.07
PICALM-215	ENST00000531558	NT5DC4	Q86YG4	428 aa		27.97	■■■□□ 2.07
PICALM-215	ENST00000531558	CBWD2	Q8IUF1	395 aa		27.97	■■■□□ 2.07
PICALM-215	ENST00000531558	FNIP2	Q9P278	1114 aa		27.97	■■■□□ 2.07
PICALM-215	ENST00000531558	ZNF233	A6NK53	670 aa		27.96	■■■□□ 2.07
PICALM-215	ENST00000531558	BMP1	P13497	986 aa		27.96	■■■□□ 2.07
PICALM-215	ENST00000531558	MCM4	P33991	863 aa		27.96	■■■□□ 2.07
PICALM-215	ENST00000531558	CYP2J2	P51589	502 aa		27.96	■■■□□ 2.07
PICALM-215	ENST00000531558	CLCN4	P51793	760 aa		27.96	■■■□□ 2.07
PICALM-215	ENST00000531558	UBE2H	P62256	183 aa		27.96	■■■□□ 2.07
PICALM-215	ENST00000531558	PSMD5	Q16401	504 aa		27.96	■■■□□ 2.07
PICALM-215	ENST00000531558	PTCRA	Q6ISU1	281 aa	Predicted RBP	27.96	■■■□□ 2.07
PICALM-215	ENST00000531558	ANKRD54	Q6NXT1	300 aa		27.96	■■■□□ 2.07
PICALM-215	ENST00000531558	PDXDC1	Q6P996	788 aa		27.96	■■■□□ 2.07
PICALM-215	ENST00000531558	ELOA2	Q8IYF1	753 aa	Predicted RBP	27.96	■■■□□ 2.07
PICALM-215	ENST00000531558	XXYLT1	Q8NBI6	393 aa		27.96	■■■□□ 2.07

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