RNA–Protein interactions for RNA: ENST00000531041.1

SF3B2-211, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 1 (best)

Gene SF3B2, Length 1,440 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-211ENST00000531041 GALTP07902 379 aa18.31■□□□□ 0.52
SF3B2-211ENST00000531041 TMEM191BP0C7N4 346 aa18.31■□□□□ 0.52
SF3B2-211ENST00000531041 DNAJB2P25686 324 aa18.31■□□□□ 0.52
SF3B2-211ENST00000531041 RPL9P32969 192 aaKnown RBP18.31■□□□□ 0.52
SF3B2-211ENST00000531041 BCAR1P56945 870 aa18.31■□□□□ 0.52
SF3B2-211ENST00000531041 SPOUT1Q5T280 376 aaKnown RBP18.31■□□□□ 0.52
SF3B2-211ENST00000531041 LMBRD2Q68DH5 695 aaPredicted RBP18.31■□□□□ 0.52
SF3B2-211ENST00000531041 OR5B17Q8NGF7 314 aa18.31■□□□□ 0.52
SF3B2-211ENST00000531041 FAM200AQ8TCP9 573 aa18.31■□□□□ 0.52
SF3B2-211ENST00000531041 SLC35C1Q96A29 364 aa18.31■□□□□ 0.52
SF3B2-211ENST00000531041 DDX27Q96GQ7 796 aaKnown RBP18.31■□□□□ 0.52
SF3B2-211ENST00000531041 MTMR12Q9C0I1 747 aa18.31■□□□□ 0.52
SF3B2-211ENST00000531041 GOLGA2P5Q9HBQ8 144 aa18.31■□□□□ 0.52
SF3B2-211ENST00000531041 AAASQ9NRG9 546 aa18.31■□□□□ 0.52
SF3B2-211ENST00000531041 DPP3Q9NY33 737 aa18.31■□□□□ 0.52
SF3B2-211ENST00000531041 MAGEC2Q9UBF1 373 aaPredicted RBP18.31■□□□□ 0.52
SF3B2-211ENST00000531041 RWDD3Q9Y3V2 267 aa18.31■□□□□ 0.52
SF3B2-211ENST00000531041 CHD9Q3L8U1 2897 aa18.3■□□□□ 0.52
SF3B2-211ENST00000531041 CASTOR2A6NHX0 329 aa18.3■□□□□ 0.52
SF3B2-211ENST00000531041 BECN2A8MW95 431 aa18.3■□□□□ 0.52
SF3B2-211ENST00000531041 STX10O60499 249 aa18.3■□□□□ 0.52
SF3B2-211ENST00000531041 TNNC2P02585 160 aa18.3■□□□□ 0.52
SF3B2-211ENST00000531041 TRIM49P0CI25 452 aa18.3■□□□□ 0.52
SF3B2-211ENST00000531041 TRIM49CP0CI26 452 aa18.3■□□□□ 0.52
SF3B2-211ENST00000531041 GTF2H1P32780 548 aa18.3■□□□□ 0.52
SF3B2-211ENST00000531041 ALDH7A1P49419 539 aaKnown RBP18.3■□□□□ 0.52
SF3B2-211ENST00000531041 TAP1Q03518 808 aa18.3■□□□□ 0.52
SF3B2-211ENST00000531041 UPP1Q16831 310 aa18.3■□□□□ 0.52
SF3B2-211ENST00000531041 KCNT2Q6UVM3 1135 aa18.3■□□□□ 0.52
SF3B2-211ENST00000531041 C1orf127Q8N9H9 656 aa18.3■□□□□ 0.52
SF3B2-211ENST00000531041 COLGALT1Q8NBJ5 622 aa18.3■□□□□ 0.52
SF3B2-211ENST00000531041 ZNF558Q96NG5 402 aa18.3■□□□□ 0.52
SF3B2-211ENST00000531041 SAMD11Q96NU1 681 aa18.3■□□□□ 0.52
SF3B2-211ENST00000531041 PAAF1Q9BRP4 392 aa18.3■□□□□ 0.52
SF3B2-211ENST00000531041 HSD3B7Q9H2F3 369 aa18.3■□□□□ 0.52
SF3B2-211ENST00000531041 NKX2-4Q9H2Z4 354 aa18.3■□□□□ 0.52
SF3B2-211ENST00000531041 FAN1Q9Y2M0 1017 aa18.3■□□□□ 0.52
SF3B2-211ENST00000531041 MYO9BQ13459 2157 aa18.29■□□□□ 0.52
SF3B2-211ENST00000531041 ANO9A1A5B4 782 aa18.29■□□□□ 0.52
SF3B2-211ENST00000531041 KCNJ18B7U540 433 aa18.29■□□□□ 0.52
SF3B2-211ENST00000531041 NRP1O14786 923 aa18.29■□□□□ 0.52
SF3B2-211ENST00000531041 ARHGEF15O94989 841 aa18.29■□□□□ 0.52
SF3B2-211ENST00000531041 C4BPAP04003 597 aaKnown RBP18.29■□□□□ 0.52
SF3B2-211ENST00000531041 ZNF18P17022 549 aa18.29■□□□□ 0.52
SF3B2-211ENST00000531041 EEF1GP26641 437 aaKnown RBP18.29■□□□□ 0.52
SF3B2-211ENST00000531041 SLC11A1P49279 550 aa18.29■□□□□ 0.52
SF3B2-211ENST00000531041 CLCNKBP51801 687 aa18.29■□□□□ 0.52
SF3B2-211ENST00000531041 PPP3CAQ08209 521 aa18.29■□□□□ 0.52
SF3B2-211ENST00000531041 KCNJ12Q14500 433 aa18.29■□□□□ 0.52
SF3B2-211ENST00000531041 HSP90AA4PQ58FG1 418 aa18.29■□□□□ 0.52
SF3B2-211ENST00000531041 TCP11X2Q5H9J9 407 aa18.29■□□□□ 0.52
SF3B2-211ENST00000531041 DCAF17Q5H9S7 520 aaPredicted RBP18.29■□□□□ 0.52
SF3B2-211ENST00000531041 TCERG1LQ5VWI1 586 aa18.29■□□□□ 0.52
SF3B2-211ENST00000531041 TRAPPC11Q7Z392 1133 aa18.29■□□□□ 0.52
SF3B2-211ENST00000531041 CACNG4Q9UBN1 327 aa18.29■□□□□ 0.52
SF3B2-211ENST00000531041 ITGA11Q9UKX5 1188 aa18.29■□□□□ 0.52
SF3B2-211ENST00000531041 PCDHB12Q9Y5F1 795 aa18.29■□□□□ 0.52
SF3B2-211ENST00000531041 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.29■□□□□ 0.52
SF3B2-211ENST00000531041 VWA8A3KMH1 1905 aa18.29■□□□□ 0.52
SF3B2-211ENST00000531041 LAMA3Q16787 3333 aa18.28■□□□□ 0.52
SF3B2-211ENST00000531041 BMPR1AP36894 532 aa18.28■□□□□ 0.52
SF3B2-211ENST00000531041 MTIF2P46199 727 aaKnown RBP18.28■□□□□ 0.52
SF3B2-211ENST00000531041 OR1G1P47890 313 aa18.28■□□□□ 0.52
SF3B2-211ENST00000531041 GUCY2FP51841 1108 aa18.28■□□□□ 0.52
SF3B2-211ENST00000531041 ERVK-21P61565 698 aa18.28■□□□□ 0.52
SF3B2-211ENST00000531041 ZACNQ401N2 412 aa18.28■□□□□ 0.52
SF3B2-211ENST00000531041 C9orf57Q5W0N0 161 aa18.28■□□□□ 0.52
SF3B2-211ENST00000531041 DCLRE1AQ6PJP8 1040 aa18.28■□□□□ 0.52
SF3B2-211ENST00000531041 C15orf39Q6ZRI6 1047 aa18.28■□□□□ 0.52
SF3B2-211ENST00000531041 SV2AQ7L0J3 742 aa18.28■□□□□ 0.52
SF3B2-211ENST00000531041 LUZP1Q86V48 1076 aa18.28■□□□□ 0.52
SF3B2-211ENST00000531041 CREBRFQ8IUR6 639 aa18.28■□□□□ 0.52
SF3B2-211ENST00000531041 CXorf38Q8TB03 319 aa18.28■□□□□ 0.52
SF3B2-211ENST00000531041 TIFAQ96CG3 184 aa18.28■□□□□ 0.52
SF3B2-211ENST00000531041 FAM84AQ96KN4 292 aa18.28■□□□□ 0.52
SF3B2-211ENST00000531041 TGS1Q96RS0 853 aaKnown RBP18.28■□□□□ 0.52
SF3B2-211ENST00000531041 COLEC11Q9BWP8 271 aa18.28■□□□□ 0.52
SF3B2-211ENST00000531041 PLVAPQ9BX97 442 aa18.28■□□□□ 0.52
SF3B2-211ENST00000531041 SLC28A3Q9HAS3 691 aa18.28■□□□□ 0.52
SF3B2-211ENST00000531041 TMEM8AQ9HCN3 771 aa18.28■□□□□ 0.52
SF3B2-211ENST00000531041 TMEM189-UBE2V1I3L0A0 370 aa18.27■□□□□ 0.52
SF3B2-211ENST00000531041 PODXLO00592 558 aa18.27■□□□□ 0.52
SF3B2-211ENST00000531041 PIRO00625 290 aa18.27■□□□□ 0.52
SF3B2-211ENST00000531041 ITGB3P05106 788 aa18.27■□□□□ 0.52
SF3B2-211ENST00000531041 PPM1AP35813 382 aa18.27■□□□□ 0.52
SF3B2-211ENST00000531041 GCLMP48507 274 aa18.27■□□□□ 0.52
SF3B2-211ENST00000531041 KCNH2Q12809 1159 aa18.27■□□□□ 0.52
SF3B2-211ENST00000531041 TDRD10Q5VZ19 366 aaKnown RBP18.27■□□□□ 0.52
SF3B2-211ENST00000531041 PPP2R2DQ66LE6 453 aa18.27■□□□□ 0.52
SF3B2-211ENST00000531041 SLC39A11Q8N1S5 342 aa18.27■□□□□ 0.52
SF3B2-211ENST00000531041 TMEM130Q8N3G9 435 aa18.27■□□□□ 0.52
SF3B2-211ENST00000531041 TUBGCP2Q9BSJ2 902 aa18.27■□□□□ 0.52
SF3B2-211ENST00000531041 C17orf80Q9BSJ5 609 aa18.27■□□□□ 0.52
SF3B2-211ENST00000531041 SPG21Q9NZD8 308 aa18.27■□□□□ 0.52
SF3B2-211ENST00000531041 SIX4Q9UIU6 781 aa18.27■□□□□ 0.52
SF3B2-211ENST00000531041 ATG2AQ2TAZ0 1938 aa18.26■□□□□ 0.51
SF3B2-211ENST00000531041 NT5C1B-RDH14C9J2C7 533 aa18.26■□□□□ 0.51
SF3B2-211ENST00000531041 C5orf67F2Z3F1 127 aa18.26■□□□□ 0.51
SF3B2-211ENST00000531041 B3GAT3O94766 335 aa18.26■□□□□ 0.51
SF3B2-211ENST00000531041 RB1P06400 928 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms