RNA–Protein interactions for RNA: ENST00000529898.1

CTR9-205, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene CTR9, Length 594 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-205ENST00000529898 LSM14BQ9BX40 385 aaKnown RBP4.56□□□□□ -1.68
CTR9-205ENST00000529898 C22orf23Q9BZE7 217 aa4.56□□□□□ -1.68
CTR9-205ENST00000529898 MS4A5Q9H3V2 200 aa4.56□□□□□ -1.68
CTR9-205ENST00000529898 A1CFQ9NQ94 594 aaKnown RBP4.56□□□□□ -1.68
CTR9-205ENST00000529898 EVLQ9UI08 416 aaPredicted RBP4.56□□□□□ -1.68
CTR9-205ENST00000529898 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.56□□□□□ -1.68
CTR9-205ENST00000529898 FZD1Q9UP38 647 aa4.56□□□□□ -1.68
CTR9-205ENST00000529898 THRAP3Q9Y2W1 955 aaKnown RBP4.56□□□□□ -1.68
CTR9-205ENST00000529898 HS3ST4Q9Y661 456 aa4.56□□□□□ -1.68
CTR9-205ENST00000529898 V9GYY5 206 aaPredicted RBP4.56□□□□□ -1.68
CTR9-205ENST00000529898 NESP48681 1621 aa4.56□□□□□ -1.68
CTR9-205ENST00000529898 UHRF1BP1LA0JNW5 1464 aa4.56□□□□□ -1.68
CTR9-205ENST00000529898 TEX14Q8IWB6 1497 aa4.56□□□□□ -1.68
CTR9-205ENST00000529898 MYOM3Q5VTT5 1437 aa4.55□□□□□ -1.68
CTR9-205ENST00000529898 AKNAQ7Z591 1439 aa4.55□□□□□ -1.68
CTR9-205ENST00000529898 CNTLNQ9NXG0 1405 aa4.55□□□□□ -1.68
CTR9-205ENST00000529898 DNMT1P26358 1616 aaKnown RBP4.55□□□□□ -1.68
CTR9-205ENST00000529898 KIF14Q15058 1648 aa4.55□□□□□ -1.68
CTR9-205ENST00000529898 LCHNA4D1U4 455 aa4.55□□□□□ -1.68
CTR9-205ENST00000529898 CTIFO43310 598 aaKnown RBP4.55□□□□□ -1.68
CTR9-205ENST00000529898 CREB3O43889 395 aa4.55□□□□□ -1.68
CTR9-205ENST00000529898 DNAJC6O75061 913 aa4.55□□□□□ -1.68
CTR9-205ENST00000529898 TPM1P09493 284 aa4.55□□□□□ -1.68
CTR9-205ENST00000529898 LTA4HP09960 611 aaKnown RBP4.55□□□□□ -1.68
CTR9-205ENST00000529898 CCDC175P0C221 793 aa4.55□□□□□ -1.68
CTR9-205ENST00000529898 XPAP23025 273 aaPredicted RBP4.55□□□□□ -1.68
CTR9-205ENST00000529898 RDXP35241 583 aaKnown RBP4.55□□□□□ -1.68
CTR9-205ENST00000529898 CASRP41180 1078 aa4.55□□□□□ -1.68
CTR9-205ENST00000529898 GZMKP49863 264 aa4.55□□□□□ -1.68
CTR9-205ENST00000529898 NRG3P56975 720 aa4.55□□□□□ -1.68
CTR9-205ENST00000529898 SESN3P58005 492 aa4.55□□□□□ -1.68
CTR9-205ENST00000529898 POU5F1Q01860 360 aaKnown RBP4.55□□□□□ -1.68
CTR9-205ENST00000529898 COL10A1Q03692 680 aa4.55□□□□□ -1.68
CTR9-205ENST00000529898 GPS2Q13227 327 aa4.55□□□□□ -1.68
CTR9-205ENST00000529898 PPP2R5AQ15172 486 aa4.55□□□□□ -1.68
CTR9-205ENST00000529898 UBE3CQ15386 1083 aa4.55□□□□□ -1.68
CTR9-205ENST00000529898 VPS72Q15906 364 aa4.55□□□□□ -1.68
CTR9-205ENST00000529898 SLC5A9Q2M3M2 681 aa4.55□□□□□ -1.68
CTR9-205ENST00000529898 KRTAP15-1Q3LI76 137 aa4.55□□□□□ -1.68
CTR9-205ENST00000529898 TEX35Q5T0J7 233 aa4.55□□□□□ -1.68
CTR9-205ENST00000529898 BROXQ5VW32 411 aa4.55□□□□□ -1.68
CTR9-205ENST00000529898 IQSEC1Q6DN90 963 aa4.55□□□□□ -1.68
CTR9-205ENST00000529898 LEKR1Q6ZMV7 388 aa4.55□□□□□ -1.68
CTR9-205ENST00000529898 C11orf74Q86VG3 221 aa4.55□□□□□ -1.68
CTR9-205ENST00000529898 GLB1L2Q8IW92 636 aa4.55□□□□□ -1.68
CTR9-205ENST00000529898 AMOTL1Q8IY63 956 aa4.55□□□□□ -1.68
CTR9-205ENST00000529898 RPUSD2Q8IZ73 545 aaKnown RBP4.55□□□□□ -1.68
CTR9-205ENST00000529898 PDILTQ8N807 584 aa4.55□□□□□ -1.68
CTR9-205ENST00000529898 MIGA1Q8NAN2 632 aa4.55□□□□□ -1.68
CTR9-205ENST00000529898 DRAXINQ8NBI3 349 aaPredicted RBP4.55□□□□□ -1.68
CTR9-205ENST00000529898 GLB1L3Q8NCI6 653 aaPredicted RBP4.55□□□□□ -1.68
CTR9-205ENST00000529898 OR14C36Q8NHC7 312 aa4.55□□□□□ -1.68
CTR9-205ENST00000529898 CCDC26Q8TAB7 109 aa4.55□□□□□ -1.68
CTR9-205ENST00000529898 TCP11Q8WWU5 503 aa4.55□□□□□ -1.68
CTR9-205ENST00000529898 SLC5A5Q92911 643 aa4.55□□□□□ -1.68
CTR9-205ENST00000529898 IL17RAQ96F46 866 aa4.55□□□□□ -1.68
CTR9-205ENST00000529898 PANK2Q9BZ23 570 aa4.55□□□□□ -1.68
CTR9-205ENST00000529898 CPEB1Q9BZB8 566 aaKnown RBP4.55□□□□□ -1.68
CTR9-205ENST00000529898 CPSF2Q9P2I0 782 aaKnown RBP4.55□□□□□ -1.68
CTR9-205ENST00000529898 C11orf21Q9P2W6 132 aa4.55□□□□□ -1.68
CTR9-205ENST00000529898 NCDNQ9UBB6 729 aa4.55□□□□□ -1.68
CTR9-205ENST00000529898 USP18Q9UMW8 372 aa4.55□□□□□ -1.68
CTR9-205ENST00000529898 TBX22Q9Y458 520 aa4.55□□□□□ -1.68
CTR9-205ENST00000529898 DMRT1Q9Y5R6 373 aa4.55□□□□□ -1.68
CTR9-205ENST00000529898 VIRMAQ69YN4 1812 aaKnown RBP4.54□□□□□ -1.68
CTR9-205ENST00000529898 ANKRD62A6NC57 917 aa4.54□□□□□ -1.68
CTR9-205ENST00000529898 TMEM191CA6NGB0 347 aa4.54□□□□□ -1.68
CTR9-205ENST00000529898 ZEB2O60315 1214 aa4.54□□□□□ -1.68
CTR9-205ENST00000529898 ERLIN1O75477 346 aa4.54□□□□□ -1.68
CTR9-205ENST00000529898 SKILP12757 684 aa4.54□□□□□ -1.68
CTR9-205ENST00000529898 VCAM1P19320 739 aa4.54□□□□□ -1.68
CTR9-205ENST00000529898 ZFP36P26651 326 aaKnown RBP4.54□□□□□ -1.68
CTR9-205ENST00000529898 ALDH1B1P30837 517 aa4.54□□□□□ -1.68
CTR9-205ENST00000529898 MAGEA9P43362 315 aa4.54□□□□□ -1.68
CTR9-205ENST00000529898 IL2P60568 153 aa4.54□□□□□ -1.68
CTR9-205ENST00000529898 DCTN1Q14203 1278 aa4.54□□□□□ -1.68
CTR9-205ENST00000529898 TRIM25Q14258 630 aaKnown RBP4.54□□□□□ -1.68
CTR9-205ENST00000529898 FAM214AQ32MH5 1076 aa4.54□□□□□ -1.68
CTR9-205ENST00000529898 TTC31Q49AM3 519 aaPredicted RBP4.54□□□□□ -1.68
CTR9-205ENST00000529898 PITRM1Q5JRX3 1037 aa4.54□□□□□ -1.68
CTR9-205ENST00000529898 KRTAP5-3Q6L8H2 238 aa4.54□□□□□ -1.68
CTR9-205ENST00000529898 DRICH1Q6PGQ1 229 aaPredicted RBP4.54□□□□□ -1.68
CTR9-205ENST00000529898 LMBR1LQ6UX01 489 aa4.54□□□□□ -1.68
CTR9-205ENST00000529898 SDCCAG8Q86SQ7 713 aaPredicted RBP4.54□□□□□ -1.68
CTR9-205ENST00000529898 RNF180Q86T96 592 aa4.54□□□□□ -1.68
CTR9-205ENST00000529898 TRIM74Q86UV6 250 aa4.54□□□□□ -1.68
CTR9-205ENST00000529898 TRIM73Q86UV7 250 aa4.54□□□□□ -1.68
CTR9-205ENST00000529898 MORC1Q86VD1 984 aa4.54□□□□□ -1.68
CTR9-205ENST00000529898 MYOCDQ8IZQ8 938 aa4.54□□□□□ -1.68
CTR9-205ENST00000529898 ZNF276Q8N554 614 aa4.54□□□□□ -1.68
CTR9-205ENST00000529898 LILRA3Q8N6C8 439 aaPredicted RBP4.54□□□□□ -1.68
CTR9-205ENST00000529898 MB21D1Q8N884 522 aa4.54□□□□□ -1.68
CTR9-205ENST00000529898 IQUBQ8NA54 791 aa4.54□□□□□ -1.68
CTR9-205ENST00000529898 OR5M3Q8NGP4 307 aa4.54□□□□□ -1.68
CTR9-205ENST00000529898 PPM1EQ8WY54 764 aa4.54□□□□□ -1.68
CTR9-205ENST00000529898 AGAP2Q99490 1192 aa4.54□□□□□ -1.68
CTR9-205ENST00000529898 SLX1AQ9BQ83 275 aa4.54□□□□□ -1.68
CTR9-205ENST00000529898 SENP7Q9BQF6 1050 aa4.54□□□□□ -1.68
CTR9-205ENST00000529898 TRIM7Q9C029 511 aa4.54□□□□□ -1.68
CTR9-205ENST00000529898 PRDM12Q9H4Q4 367 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 112.4 ms