RNA–Protein interactions for RNA: ENST00000529856.5

CCDC90B-216, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,039 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-216ENST00000529856 CNPP09543 421 aaKnown RBP13.77□□□□□ -0.21
CCDC90B-216ENST00000529856 BMP1P13497 986 aa13.77□□□□□ -0.21
CCDC90B-216ENST00000529856 CYP3A5P20815 502 aa13.77□□□□□ -0.21
CCDC90B-216ENST00000529856 LRPAP1P30533 357 aa13.77□□□□□ -0.21
CCDC90B-216ENST00000529856 NDUFV1P49821 464 aa13.77□□□□□ -0.21
CCDC90B-216ENST00000529856 KCNQ1P51787 676 aa13.77□□□□□ -0.21
CCDC90B-216ENST00000529856 SNRPFP62306 86 aaKnown RBP13.77□□□□□ -0.21
CCDC90B-216ENST00000529856 RBM10P98175 930 aaKnown RBP13.77□□□□□ -0.21
CCDC90B-216ENST00000529856 TJAP1Q5JTD0 557 aa13.77□□□□□ -0.21
CCDC90B-216ENST00000529856 JADE1Q6IE81 842 aa13.77□□□□□ -0.21
CCDC90B-216ENST00000529856 KIAA1841Q6NSI8 718 aa13.77□□□□□ -0.21
CCDC90B-216ENST00000529856 NELFCDQ8IXH7 590 aa13.77□□□□□ -0.21
CCDC90B-216ENST00000529856 TMEM87AQ8NBN3 555 aa13.77□□□□□ -0.21
CCDC90B-216ENST00000529856 KIAA0895Q8NCT3 520 aa13.77□□□□□ -0.21
CCDC90B-216ENST00000529856 C3orf58Q8NDZ4 430 aa13.77□□□□□ -0.21
CCDC90B-216ENST00000529856 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.77□□□□□ -0.21
CCDC90B-216ENST00000529856 CCDC47Q96A33 483 aaKnown RBP13.77□□□□□ -0.21
CCDC90B-216ENST00000529856 SAAL1Q96ER3 474 aa13.77□□□□□ -0.21
CCDC90B-216ENST00000529856 B3GALT6Q96L58 329 aa13.77□□□□□ -0.21
CCDC90B-216ENST00000529856 TIGD1Q96MW7 591 aa13.77□□□□□ -0.21
CCDC90B-216ENST00000529856 KLHL5Q96PQ7 755 aa13.77□□□□□ -0.21
CCDC90B-216ENST00000529856 EMILIN2Q9BXX0 1053 aa13.77□□□□□ -0.21
CCDC90B-216ENST00000529856 RXFP1Q9HBX9 757 aa13.77□□□□□ -0.21
CCDC90B-216ENST00000529856 TUBGCP4Q9UGJ1 667 aa13.77□□□□□ -0.21
CCDC90B-216ENST00000529856 DERAQ9Y315 318 aa13.77□□□□□ -0.21
CCDC90B-216ENST00000529856 SPTBN5Q9NRC6 3674 aaKnown RBP13.77□□□□□ -0.21
CCDC90B-216ENST00000529856 ANK1P16157 1881 aa13.76□□□□□ -0.21
CCDC90B-216ENST00000529856 GOLGA8IPA6NC78 632 aa13.76□□□□□ -0.21
CCDC90B-216ENST00000529856 GOLGA8JA6NMD2 632 aa13.76□□□□□ -0.21
CCDC90B-216ENST00000529856 XPOTO43592 962 aaKnown RBP13.76□□□□□ -0.21
CCDC90B-216ENST00000529856 TRAPPC3O43617 180 aa13.76□□□□□ -0.21
CCDC90B-216ENST00000529856 EXTL3O43909 919 aa13.76□□□□□ -0.21
CCDC90B-216ENST00000529856 GADD45BO75293 160 aaPredicted RBP13.76□□□□□ -0.21
CCDC90B-216ENST00000529856 RHOBTB3O94955 611 aa13.76□□□□□ -0.21
CCDC90B-216ENST00000529856 IL18RAPO95256 599 aa13.76□□□□□ -0.21
CCDC90B-216ENST00000529856 KCNB1Q14721 858 aa13.76□□□□□ -0.21
CCDC90B-216ENST00000529856 KNOP1Q1ED39 458 aaKnown RBP13.76□□□□□ -0.21
CCDC90B-216ENST00000529856 FAM171A1Q5VUB5 890 aa13.76□□□□□ -0.21
CCDC90B-216ENST00000529856 SPATA1Q5VX52 437 aa13.76□□□□□ -0.21
CCDC90B-216ENST00000529856 PPFIBP1Q86W92 1011 aa13.76□□□□□ -0.21
CCDC90B-216ENST00000529856 GPD1LQ8N335 351 aa13.76□□□□□ -0.21
CCDC90B-216ENST00000529856 SLC22A17Q8WUG5 538 aa13.76□□□□□ -0.21
CCDC90B-216ENST00000529856 RIN2Q8WYP3 895 aaPredicted RBP13.76□□□□□ -0.21
CCDC90B-216ENST00000529856 MSLNLQ96KJ4 702 aa13.76□□□□□ -0.21
CCDC90B-216ENST00000529856 TTPALQ9BTX7 342 aa13.76□□□□□ -0.21
CCDC90B-216ENST00000529856 AGPAT3Q9NRZ7 376 aa13.76□□□□□ -0.21
CCDC90B-216ENST00000529856 CGNQ9P2M7 1197 aaKnown RBP13.76□□□□□ -0.21
CCDC90B-216ENST00000529856 BARX2Q9UMQ3 279 aaPredicted RBP13.76□□□□□ -0.21
CCDC90B-216ENST00000529856 C2CD2Q9Y426 696 aa13.76□□□□□ -0.21
CCDC90B-216ENST00000529856 HCFC2Q9Y5Z7 792 aa13.76□□□□□ -0.21
CCDC90B-216ENST00000529856 A0A0C4DFX4 3053 aa13.76□□□□□ -0.21
CCDC90B-216ENST00000529856 TEX28O15482 410 aa13.75□□□□□ -0.21
CCDC90B-216ENST00000529856 NFICP08651 508 aa13.75□□□□□ -0.21
CCDC90B-216ENST00000529856 SRGAP2BP0DMP2 458 aa13.75□□□□□ -0.21
CCDC90B-216ENST00000529856 FGFR3P22607 806 aa13.75□□□□□ -0.21
CCDC90B-216ENST00000529856 KLRC2P26717 231 aa13.75□□□□□ -0.21
CCDC90B-216ENST00000529856 BRCC3P46736 316 aa13.75□□□□□ -0.21
CCDC90B-216ENST00000529856 TMEM132DQ14C87 1099 aa13.75□□□□□ -0.21
CCDC90B-216ENST00000529856 PUS10Q3MIT2 529 aaKnown RBP13.75□□□□□ -0.21
CCDC90B-216ENST00000529856 RTP2Q5QGT7 225 aa13.75□□□□□ -0.21
CCDC90B-216ENST00000529856 LLGL2Q6P1M3 1020 aa13.75□□□□□ -0.21
CCDC90B-216ENST00000529856 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.75□□□□□ -0.21
CCDC90B-216ENST00000529856 HS2ST1Q7LGA3 356 aa13.75□□□□□ -0.21
CCDC90B-216ENST00000529856 CEP57Q86XR8 500 aa13.75□□□□□ -0.21
CCDC90B-216ENST00000529856 BRSK2Q8IWQ3 736 aa13.75□□□□□ -0.21
CCDC90B-216ENST00000529856 C12orf56Q8IXR9 622 aa13.75□□□□□ -0.21
CCDC90B-216ENST00000529856 TMEM130Q8N3G9 435 aa13.75□□□□□ -0.21
CCDC90B-216ENST00000529856 BEST2Q8NFU1 509 aa13.75□□□□□ -0.21
CCDC90B-216ENST00000529856 CASP10Q92851 521 aa13.75□□□□□ -0.21
CCDC90B-216ENST00000529856 IPO9Q96P70 1041 aaKnown RBP13.75□□□□□ -0.21
CCDC90B-216ENST00000529856 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.75□□□□□ -0.21
CCDC90B-216ENST00000529856 RBAKQ9NYW8 714 aaPredicted RBP13.75□□□□□ -0.21
CCDC90B-216ENST00000529856 HSPBP1Q9NZL4 362 aa13.75□□□□□ -0.21
CCDC90B-216ENST00000529856 FNIP2Q9P278 1114 aa13.75□□□□□ -0.21
CCDC90B-216ENST00000529856 CD207Q9UJ71 328 aa13.75□□□□□ -0.21
CCDC90B-216ENST00000529856 VWA8A3KMH1 1905 aa13.74□□□□□ -0.21
CCDC90B-216ENST00000529856 GRXCR2A6NFK2 248 aa13.74□□□□□ -0.21
CCDC90B-216ENST00000529856 ZNF233A6NK53 670 aa13.74□□□□□ -0.21
CCDC90B-216ENST00000529856 I3L4J1 428 aa13.74□□□□□ -0.21
CCDC90B-216ENST00000529856 CLIC2O15247 247 aa13.74□□□□□ -0.21
CCDC90B-216ENST00000529856 CLCN4P51793 760 aa13.74□□□□□ -0.21
CCDC90B-216ENST00000529856 GUCY2FP51841 1108 aa13.74□□□□□ -0.21
CCDC90B-216ENST00000529856 WNT7BP56706 349 aa13.74□□□□□ -0.21
CCDC90B-216ENST00000529856 CREMQ03060 361 aa13.74□□□□□ -0.21
CCDC90B-216ENST00000529856 PNOCQ13519 176 aa13.74□□□□□ -0.21
CCDC90B-216ENST00000529856 PTCRAQ6ISU1 281 aaPredicted RBP13.74□□□□□ -0.21
CCDC90B-216ENST00000529856 ANKRD54Q6NXT1 300 aa13.74□□□□□ -0.21
CCDC90B-216ENST00000529856 PRSS55Q6UWB4 352 aaPredicted RBP13.74□□□□□ -0.21
CCDC90B-216ENST00000529856 NT5DC4Q86YG4 428 aa13.74□□□□□ -0.21
CCDC90B-216ENST00000529856 EFCAB13Q8IY85 973 aa13.74□□□□□ -0.21
CCDC90B-216ENST00000529856 ELOA2Q8IYF1 753 aaPredicted RBP13.74□□□□□ -0.21
CCDC90B-216ENST00000529856 LNX1Q8TBB1 728 aaPredicted RBP13.74□□□□□ -0.21
CCDC90B-216ENST00000529856 PIK3R5Q8WYR1 880 aa13.74□□□□□ -0.21
CCDC90B-216ENST00000529856 FBXL18Q96ME1 805 aa13.74□□□□□ -0.21
CCDC90B-216ENST00000529856 KCTD10Q9H3F6 313 aa13.74□□□□□ -0.21
CCDC90B-216ENST00000529856 KIAA1586Q9HCI6 787 aa13.74□□□□□ -0.21
CCDC90B-216ENST00000529856 TSHZ2Q9NRE2 1034 aa13.74□□□□□ -0.21
CCDC90B-216ENST00000529856 NUB1Q9Y5A7 615 aa13.74□□□□□ -0.21
CCDC90B-216ENST00000529856 TCF20Q9UGU0 1960 aaKnown RBP13.73□□□□□ -0.21
CCDC90B-216ENST00000529856 ANO9A1A5B4 782 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms